RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 A0A1B0GU33 70 aa6.04□□□□□ -1.44
GGA3-205ENST00000578348 ROMO1P60602 79 aa6.04□□□□□ -1.44
GGA3-205ENST00000578348 TNXBP22105 4242 aa6.03□□□□□ -1.44
GGA3-205ENST00000578348 MT1HL1P0DM35 61 aa6.02□□□□□ -1.44
GGA3-205ENST00000578348 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
GGA3-205ENST00000578348 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
GGA3-205ENST00000578348 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
GGA3-205ENST00000578348 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
GGA3-205ENST00000578348 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
GGA3-205ENST00000578348 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
GGA3-205ENST00000578348 XP32Q5T750 250 aa5.95□□□□□ -1.46
GGA3-205ENST00000578348 J3QL48 77 aa5.94□□□□□ -1.46
GGA3-205ENST00000578348 DMBT1Q9UGM3 2413 aaPredicted RBP5.91□□□□□ -1.46
GGA3-205ENST00000578348 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.47
GGA3-205ENST00000578348 K7ERS5 55 aa5.89□□□□□ -1.47
GGA3-205ENST00000578348 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
GGA3-205ENST00000578348 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
GGA3-205ENST00000578348 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
GGA3-205ENST00000578348 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
GGA3-205ENST00000578348 P0C880 135 aa5.82□□□□□ -1.48
GGA3-205ENST00000578348 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
GGA3-205ENST00000578348 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
GGA3-205ENST00000578348 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
GGA3-205ENST00000578348 S4R3F8 94 aa5.79□□□□□ -1.48
GGA3-205ENST00000578348 A0A0D9SG42 100 aa5.78□□□□□ -1.48
GGA3-205ENST00000578348 KRTAP3-2Q9BYR7 98 aa5.76□□□□□ -1.49
GGA3-205ENST00000578348 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
GGA3-205ENST00000578348 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
GGA3-205ENST00000578348 LPAP08519 4548 aa5.66□□□□□ -1.5
GGA3-205ENST00000578348 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
GGA3-205ENST00000578348 HERC2O95714 4834 aa5.62□□□□□ -1.51
GGA3-205ENST00000578348 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
GGA3-205ENST00000578348 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
GGA3-205ENST00000578348 LRP2P98164 4655 aa5.61□□□□□ -1.51
GGA3-205ENST00000578348 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
GGA3-205ENST00000578348 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
GGA3-205ENST00000578348 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
GGA3-205ENST00000578348 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
GGA3-205ENST00000578348 M0QZ58 72 aa5.5□□□□□ -1.53
GGA3-205ENST00000578348 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
GGA3-205ENST00000578348 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
GGA3-205ENST00000578348 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.54
GGA3-205ENST00000578348 R4GN34 69 aa5.4□□□□□ -1.55
GGA3-205ENST00000578348 LUZP6Q538Z0 58 aa5.34□□□□□ -1.56
GGA3-205ENST00000578348 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
GGA3-205ENST00000578348 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
GGA3-205ENST00000578348 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
GGA3-205ENST00000578348 HERC1Q15751 4861 aa5.27□□□□□ -1.57
GGA3-205ENST00000578348 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
GGA3-205ENST00000578348 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
GGA3-205ENST00000578348 MUC2Q02817 5179 aa5.16□□□□□ -1.58
GGA3-205ENST00000578348 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
GGA3-205ENST00000578348 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
GGA3-205ENST00000578348 MT1HP80294 61 aa5.05□□□□□ -1.6
GGA3-205ENST00000578348 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
GGA3-205ENST00000578348 M0R2T5 61 aa5.02□□□□□ -1.61
GGA3-205ENST00000578348 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
GGA3-205ENST00000578348 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
GGA3-205ENST00000578348 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
GGA3-205ENST00000578348 TNP1P09430 55 aa4.93□□□□□ -1.62
GGA3-205ENST00000578348 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
GGA3-205ENST00000578348 MT2AP02795 61 aa4.92□□□□□ -1.62
GGA3-205ENST00000578348 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.62
GGA3-205ENST00000578348 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
GGA3-205ENST00000578348 MT1FP04733 61 aa4.89□□□□□ -1.63
GGA3-205ENST00000578348 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
GGA3-205ENST00000578348 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
GGA3-205ENST00000578348 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
GGA3-205ENST00000578348 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
GGA3-205ENST00000578348 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
GGA3-205ENST00000578348 MT1BP07438 61 aa4.7□□□□□ -1.66
GGA3-205ENST00000578348 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
GGA3-205ENST00000578348 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.66
GGA3-205ENST00000578348 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
GGA3-205ENST00000578348 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
GGA3-205ENST00000578348 MT1XP80297 61 aa4.6□□□□□ -1.67
GGA3-205ENST00000578348 INE1O15225 51 aa4.56□□□□□ -1.68
GGA3-205ENST00000578348 LCE2BO14633 110 aa4.53□□□□□ -1.68
GGA3-205ENST00000578348 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
GGA3-205ENST00000578348 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
GGA3-205ENST00000578348 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
GGA3-205ENST00000578348 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
GGA3-205ENST00000578348 USH2AO75445 5202 aa4.29□□□□□ -1.72
GGA3-205ENST00000578348 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
GGA3-205ENST00000578348 KMT2DO14686 5537 aa4.23□□□□□ -1.73
GGA3-205ENST00000578348 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
GGA3-205ENST00000578348 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
GGA3-205ENST00000578348 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
GGA3-205ENST00000578348 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
GGA3-205ENST00000578348 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
GGA3-205ENST00000578348 LCE2DQ5TA82 110 aaPredicted RBP4.14□□□□□ -1.75
GGA3-205ENST00000578348 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
GGA3-205ENST00000578348 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
GGA3-205ENST00000578348 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
GGA3-205ENST00000578348 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
GGA3-205ENST00000578348 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
GGA3-205ENST00000578348 MT1EP04732 61 aa4.01□□□□□ -1.77
GGA3-205ENST00000578348 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
GGA3-205ENST00000578348 MT1LQ93083 61 aa3.97□□□□□ -1.77
GGA3-205ENST00000578348 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms