RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
CTC1-203ENST00000578240 ACYP2P14621 99 aa6.55□□□□□ -1.36
CTC1-203ENST00000578240 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
CTC1-203ENST00000578240 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
CTC1-203ENST00000578240 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
CTC1-203ENST00000578240 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
CTC1-203ENST00000578240 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
CTC1-203ENST00000578240 CHKB-CPT1BH3BT56 60 aa6.47□□□□□ -1.37
CTC1-203ENST00000578240 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.37
CTC1-203ENST00000578240 LCA10Q71F78 164 aa6.45□□□□□ -1.38
CTC1-203ENST00000578240 S4R3F8 94 aa6.42□□□□□ -1.38
CTC1-203ENST00000578240 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
CTC1-203ENST00000578240 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
CTC1-203ENST00000578240 MT1HP80294 61 aa6.32□□□□□ -1.4
CTC1-203ENST00000578240 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
CTC1-203ENST00000578240 Q1T7F1 81 aa6.29□□□□□ -1.4
CTC1-203ENST00000578240 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
CTC1-203ENST00000578240 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
CTC1-203ENST00000578240 V9GYY9 64 aa6.26□□□□□ -1.41
CTC1-203ENST00000578240 M0R2T5 61 aa6.19□□□□□ -1.42
CTC1-203ENST00000578240 SEC61GP60059 68 aa6.19□□□□□ -1.42
CTC1-203ENST00000578240 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
CTC1-203ENST00000578240 PSPHP1O15172 72 aa6.18□□□□□ -1.42
CTC1-203ENST00000578240 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
CTC1-203ENST00000578240 Q5VV11 94 aa6.17□□□□□ -1.42
CTC1-203ENST00000578240 A0A1B0GU69 56 aa6.16□□□□□ -1.42
CTC1-203ENST00000578240 H0YAA0 97 aa6.16□□□□□ -1.42
CTC1-203ENST00000578240 P0C880 135 aa6.15□□□□□ -1.42
CTC1-203ENST00000578240 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
CTC1-203ENST00000578240 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
CTC1-203ENST00000578240 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
CTC1-203ENST00000578240 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
CTC1-203ENST00000578240 MT2AP02795 61 aa6.06□□□□□ -1.44
CTC1-203ENST00000578240 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
CTC1-203ENST00000578240 MT1FP04733 61 aa6.03□□□□□ -1.44
CTC1-203ENST00000578240 A0A1B0GU33 70 aa6.01□□□□□ -1.45
CTC1-203ENST00000578240 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
CTC1-203ENST00000578240 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
CTC1-203ENST00000578240 A8MU10 97 aa5.96□□□□□ -1.46
CTC1-203ENST00000578240 UQCR11O14957 56 aa5.96□□□□□ -1.46
CTC1-203ENST00000578240 A6NED7 52 aa5.95□□□□□ -1.46
CTC1-203ENST00000578240 M0QZ58 72 aa5.91□□□□□ -1.46
CTC1-203ENST00000578240 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
CTC1-203ENST00000578240 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
CTC1-203ENST00000578240 R4GN34 69 aa5.9□□□□□ -1.47
CTC1-203ENST00000578240 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
CTC1-203ENST00000578240 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
CTC1-203ENST00000578240 LCE2BO14633 110 aa5.87□□□□□ -1.47
CTC1-203ENST00000578240 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
CTC1-203ENST00000578240 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
CTC1-203ENST00000578240 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
CTC1-203ENST00000578240 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
CTC1-203ENST00000578240 A0A0D9SG42 100 aa5.82□□□□□ -1.48
CTC1-203ENST00000578240 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
CTC1-203ENST00000578240 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
CTC1-203ENST00000578240 USH2AO75445 5202 aa5.76□□□□□ -1.49
CTC1-203ENST00000578240 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
CTC1-203ENST00000578240 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
CTC1-203ENST00000578240 A6NN06 94 aa5.7□□□□□ -1.5
CTC1-203ENST00000578240 MT1BP07438 61 aa5.7□□□□□ -1.5
CTC1-203ENST00000578240 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
CTC1-203ENST00000578240 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
CTC1-203ENST00000578240 K7ERS5 55 aa5.69□□□□□ -1.5
CTC1-203ENST00000578240 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
CTC1-203ENST00000578240 SPINT4Q6UDR6 99 aa5.66□□□□□ -1.5
CTC1-203ENST00000578240 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.51
CTC1-203ENST00000578240 PLAC4Q8WY50 150 aa5.59□□□□□ -1.52
CTC1-203ENST00000578240 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
CTC1-203ENST00000578240 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
CTC1-203ENST00000578240 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
CTC1-203ENST00000578240 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
CTC1-203ENST00000578240 MT1XP80297 61 aa5.49□□□□□ -1.53
CTC1-203ENST00000578240 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
CTC1-203ENST00000578240 C10orf95Q9H7T3 257 aa5.47□□□□□ -1.53
CTC1-203ENST00000578240 ROMO1P60602 79 aa5.39□□□□□ -1.55
CTC1-203ENST00000578240 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
CTC1-203ENST00000578240 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
CTC1-203ENST00000578240 H3BS24 57 aa5.33□□□□□ -1.56
CTC1-203ENST00000578240 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CTC1-203ENST00000578240 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
CTC1-203ENST00000578240 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
CTC1-203ENST00000578240 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
CTC1-203ENST00000578240 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
CTC1-203ENST00000578240 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
CTC1-203ENST00000578240 TNP1P09430 55 aa5.23□□□□□ -1.57
CTC1-203ENST00000578240 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
CTC1-203ENST00000578240 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
CTC1-203ENST00000578240 KMT2DO14686 5537 aa5.15□□□□□ -1.59
CTC1-203ENST00000578240 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
CTC1-203ENST00000578240 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
CTC1-203ENST00000578240 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
CTC1-203ENST00000578240 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
CTC1-203ENST00000578240 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
CTC1-203ENST00000578240 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
CTC1-203ENST00000578240 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
CTC1-203ENST00000578240 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
CTC1-203ENST00000578240 NEBP20929 6669 aa5.02□□□□□ -1.61
CTC1-203ENST00000578240 KRTAP5-9P26371 169 aa5.02□□□□□ -1.61
CTC1-203ENST00000578240 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
CTC1-203ENST00000578240 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms