RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 H0Y9P7 68 aa7.53□□□□□ -1.2
IFT20-206ENST00000578122 CYP4F30PQ9H0H9 118 aa7.53□□□□□ -1.2
IFT20-206ENST00000578122 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
IFT20-206ENST00000578122 ATOX1O00244 68 aa7.51□□□□□ -1.21
IFT20-206ENST00000578122 MT-ATP8P03928 68 aa7.51□□□□□ -1.21
IFT20-206ENST00000578122 OCR1Q9BZK8 76 aa7.51□□□□□ -1.21
IFT20-206ENST00000578122 IMUPQ9GZP8 106 aa7.5□□□□□ -1.21
IFT20-206ENST00000578122 SCGB1A1P11684 91 aa7.47□□□□□ -1.21
IFT20-206ENST00000578122 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
IFT20-206ENST00000578122 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
IFT20-206ENST00000578122 MP68P56378 58 aa7.43□□□□□ -1.22
IFT20-206ENST00000578122 LINC00208Q96KT6 92 aa7.43□□□□□ -1.22
IFT20-206ENST00000578122 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
IFT20-206ENST00000578122 MT2AP02795 61 aa7.4□□□□□ -1.22
IFT20-206ENST00000578122 FAM236AA0A1B0GUQ0 79 aa7.37□□□□□ -1.23
IFT20-206ENST00000578122 FAM236BA0A1B0GV22 79 aa7.37□□□□□ -1.23
IFT20-206ENST00000578122 H3BPC8 53 aa7.36□□□□□ -1.23
IFT20-206ENST00000578122 S4R3F8 94 aa7.35□□□□□ -1.23
IFT20-206ENST00000578122 MT1FP04733 61 aa7.34□□□□□ -1.23
IFT20-206ENST00000578122 KLKP1Q107X0 134 aa7.34□□□□□ -1.23
IFT20-206ENST00000578122 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
IFT20-206ENST00000578122 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
IFT20-206ENST00000578122 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
IFT20-206ENST00000578122 LCA10Q71F78 164 aa7.29□□□□□ -1.24
IFT20-206ENST00000578122 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
IFT20-206ENST00000578122 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
IFT20-206ENST00000578122 A8MUN3 132 aa7.25□□□□□ -1.25
IFT20-206ENST00000578122 NDUFC1O43677 76 aa7.16□□□□□ -1.26
IFT20-206ENST00000578122 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
IFT20-206ENST00000578122 DMAC1Q96GE9 116 aa7.15□□□□□ -1.26
IFT20-206ENST00000578122 SNURFQ9Y675 71 aa7.13□□□□□ -1.27
IFT20-206ENST00000578122 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
IFT20-206ENST00000578122 ACYP2P14621 99 aa7.03□□□□□ -1.28
IFT20-206ENST00000578122 H0YAA0 97 aa7.01□□□□□ -1.29
IFT20-206ENST00000578122 COX7CP15954 63 aa7.01□□□□□ -1.29
IFT20-206ENST00000578122 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
IFT20-206ENST00000578122 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
IFT20-206ENST00000578122 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
IFT20-206ENST00000578122 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
IFT20-206ENST00000578122 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
IFT20-206ENST00000578122 USH2AO75445 5202 aa6.92□□□□□ -1.3
IFT20-206ENST00000578122 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
IFT20-206ENST00000578122 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
IFT20-206ENST00000578122 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
IFT20-206ENST00000578122 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
IFT20-206ENST00000578122 H7BZZ5 65 aa6.84□□□□□ -1.31
IFT20-206ENST00000578122 Q5VV11 94 aa6.84□□□□□ -1.31
IFT20-206ENST00000578122 P0C880 135 aa6.83□□□□□ -1.32
IFT20-206ENST00000578122 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
IFT20-206ENST00000578122 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
IFT20-206ENST00000578122 MT1BP07438 61 aa6.81□□□□□ -1.32
IFT20-206ENST00000578122 COA5Q86WW8 74 aa6.79□□□□□ -1.32
IFT20-206ENST00000578122 CCDC179H3BU77 68 aa6.77□□□□□ -1.33
IFT20-206ENST00000578122 R4GN34 69 aa6.75□□□□□ -1.33
IFT20-206ENST00000578122 M0QZ58 72 aa6.71□□□□□ -1.34
IFT20-206ENST00000578122 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
IFT20-206ENST00000578122 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
IFT20-206ENST00000578122 A6NN06 94 aa6.63□□□□□ -1.35
IFT20-206ENST00000578122 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
IFT20-206ENST00000578122 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
IFT20-206ENST00000578122 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
IFT20-206ENST00000578122 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
IFT20-206ENST00000578122 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
IFT20-206ENST00000578122 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
IFT20-206ENST00000578122 SEC61GP60059 68 aa6.57□□□□□ -1.36
IFT20-206ENST00000578122 PCP4P48539 62 aa6.56□□□□□ -1.36
IFT20-206ENST00000578122 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
IFT20-206ENST00000578122 TMEM258P61165 79 aa6.53□□□□□ -1.36
IFT20-206ENST00000578122 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
IFT20-206ENST00000578122 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
IFT20-206ENST00000578122 MT1XP80297 61 aa6.45□□□□□ -1.38
IFT20-206ENST00000578122 A0A1B0GU33 70 aa6.43□□□□□ -1.38
IFT20-206ENST00000578122 A0A1B0GU69 56 aa6.43□□□□□ -1.38
IFT20-206ENST00000578122 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
IFT20-206ENST00000578122 A0A0D9SG42 100 aa6.34□□□□□ -1.39
IFT20-206ENST00000578122 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
IFT20-206ENST00000578122 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
IFT20-206ENST00000578122 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
IFT20-206ENST00000578122 NEBP20929 6669 aa6.27□□□□□ -1.41
IFT20-206ENST00000578122 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
IFT20-206ENST00000578122 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
IFT20-206ENST00000578122 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
IFT20-206ENST00000578122 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
IFT20-206ENST00000578122 SPINT4Q6UDR6 99 aa6.22□□□□□ -1.41
IFT20-206ENST00000578122 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
IFT20-206ENST00000578122 KRTAP2-2Q9BYT5 123 aa6.2□□□□□ -1.42
IFT20-206ENST00000578122 A8MU10 97 aa6.19□□□□□ -1.42
IFT20-206ENST00000578122 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
IFT20-206ENST00000578122 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
IFT20-206ENST00000578122 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
IFT20-206ENST00000578122 V9GYY9 64 aa6.13□□□□□ -1.43
IFT20-206ENST00000578122 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
IFT20-206ENST00000578122 UQCR11O14957 56 aa6.11□□□□□ -1.43
IFT20-206ENST00000578122 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.11□□□□□ -1.43
IFT20-206ENST00000578122 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
IFT20-206ENST00000578122 Q1T7F1 81 aa6.09□□□□□ -1.43
IFT20-206ENST00000578122 KRTAP5-11Q6L8G4 156 aa6.09□□□□□ -1.43
IFT20-206ENST00000578122 PSPHP1O15172 72 aa6.06□□□□□ -1.44
IFT20-206ENST00000578122 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
IFT20-206ENST00000578122 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms