RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 RPS28P62857 69 aaKnown RBP9.46□□□□□ -0.89
PRKCA-203ENST00000578063 COA5Q86WW8 74 aa9.45□□□□□ -0.9
PRKCA-203ENST00000578063 KRTAP4-1Q9BYQ7 146 aa9.45□□□□□ -0.9
PRKCA-203ENST00000578063 KRTAP3-1Q9BYR8 98 aa9.45□□□□□ -0.9
PRKCA-203ENST00000578063 RBM12B-AS1Q9P1G2 102 aa9.45□□□□□ -0.9
PRKCA-203ENST00000578063 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
PRKCA-203ENST00000578063 LCE3BQ5TA77 95 aa9.32□□□□□ -0.92
PRKCA-203ENST00000578063 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
PRKCA-203ENST00000578063 UBR4Q5T4S7 5183 aa9.3□□□□□ -0.92
PRKCA-203ENST00000578063 SMIM26A0A096LP01 95 aa9.26□□□□□ -0.93
PRKCA-203ENST00000578063 SVIPQ8NHG7 77 aa9.23□□□□□ -0.93
PRKCA-203ENST00000578063 S4R3F8 94 aa9.23□□□□□ -0.93
PRKCA-203ENST00000578063 MUC2Q02817 5179 aa9.22□□□□□ -0.93
PRKCA-203ENST00000578063 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
PRKCA-203ENST00000578063 RNF213Q63HN8 5207 aa9.21□□□□□ -0.94
PRKCA-203ENST00000578063 KRTAP4-8A0A0G2JLE6 195 aa9.2□□□□□ -0.94
PRKCA-203ENST00000578063 KRTAP19-2Q3LHN2 52 aa9.2□□□□□ -0.94
PRKCA-203ENST00000578063 LCE2CQ5TA81 110 aa9.18□□□□□ -0.94
PRKCA-203ENST00000578063 LCA10Q71F78 164 aa9.18□□□□□ -0.94
PRKCA-203ENST00000578063 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
PRKCA-203ENST00000578063 KRTAP9-9Q9BYP9 154 aa9.12□□□□□ -0.95
PRKCA-203ENST00000578063 KRTAP9-4Q9BYQ2 154 aa9.12□□□□□ -0.95
PRKCA-203ENST00000578063 V9GYY9 64 aa9.11□□□□□ -0.95
PRKCA-203ENST00000578063 Q1T7F1 81 aa9.1□□□□□ -0.95
PRKCA-203ENST00000578063 LINC01558Q9Y6Z2 57 aa9.05□□□□□ -0.96
PRKCA-203ENST00000578063 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
PRKCA-203ENST00000578063 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
PRKCA-203ENST00000578063 KRTAP4-12Q9BQ66 201 aa8.99□□□□□ -0.97
PRKCA-203ENST00000578063 KRTAP4-7Q9BYR0 210 aa8.96□□□□□ -0.98
PRKCA-203ENST00000578063 A0A1B0GU69 56 aa8.95□□□□□ -0.98
PRKCA-203ENST00000578063 PRR15LQ9BU68 103 aa8.95□□□□□ -0.98
PRKCA-203ENST00000578063 SEC61GP60059 68 aa8.94□□□□□ -0.98
PRKCA-203ENST00000578063 PSPHP1O15172 72 aa8.91□□□□□ -0.98
PRKCA-203ENST00000578063 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
PRKCA-203ENST00000578063 MT1HP80294 61 aa8.87□□□□□ -0.99
PRKCA-203ENST00000578063 H0YAA0 97 aa8.85□□□□□ -0.99
PRKCA-203ENST00000578063 Q5VV11 94 aa8.85□□□□□ -0.99
PRKCA-203ENST00000578063 M0R2T5 61 aa8.83□□□□□ -1
PRKCA-203ENST00000578063 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
PRKCA-203ENST00000578063 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
PRKCA-203ENST00000578063 P0C880 135 aa8.71□□□□□ -1.01
PRKCA-203ENST00000578063 LCE1DQ5T752 114 aa8.7□□□□□ -1.02
PRKCA-203ENST00000578063 A0A1B0GU33 70 aa8.69□□□□□ -1.02
PRKCA-203ENST00000578063 A6NED7 52 aa8.68□□□□□ -1.02
PRKCA-203ENST00000578063 UQCR11O14957 56 aa8.67□□□□□ -1.02
PRKCA-203ENST00000578063 MIR22HGQ0VDD5 57 aa8.55□□□□□ -1.04
PRKCA-203ENST00000578063 KRTAP4-2Q9BYR5 136 aa8.55□□□□□ -1.04
PRKCA-203ENST00000578063 KRTAP4-9Q9BYQ8 210 aa8.54□□□□□ -1.04
PRKCA-203ENST00000578063 M0QZ58 72 aa8.54□□□□□ -1.04
PRKCA-203ENST00000578063 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
PRKCA-203ENST00000578063 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 KRTAP9-8Q9BYQ0 159 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 CRIPTQ9P021 101 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 R4GN34 69 aa8.51□□□□□ -1.05
PRKCA-203ENST00000578063 MT2AP02795 61 aa8.49□□□□□ -1.05
PRKCA-203ENST00000578063 MT1FP04733 61 aa8.44□□□□□ -1.06
PRKCA-203ENST00000578063 KRTAP10-10P60014 251 aa8.43□□□□□ -1.06
PRKCA-203ENST00000578063 A8MU10 97 aa8.4□□□□□ -1.07
PRKCA-203ENST00000578063 A0A0D9SG42 100 aa8.35□□□□□ -1.07
PRKCA-203ENST00000578063 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
PRKCA-203ENST00000578063 KRTAP5-3Q6L8H2 238 aa8.31□□□□□ -1.08
PRKCA-203ENST00000578063 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
PRKCA-203ENST00000578063 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
PRKCA-203ENST00000578063 A6NN06 94 aa8.22□□□□□ -1.09
PRKCA-203ENST00000578063 K7ERS5 55 aa8.22□□□□□ -1.09
PRKCA-203ENST00000578063 KRTAP9-3Q9BYQ3 159 aa8.22□□□□□ -1.09
PRKCA-203ENST00000578063 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
PRKCA-203ENST00000578063 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
PRKCA-203ENST00000578063 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
PRKCA-203ENST00000578063 KRTAP19-8Q3LI54 63 aa8.1□□□□□ -1.11
PRKCA-203ENST00000578063 KRTAP4-11Q9BYQ6 195 aa8.09□□□□□ -1.11
PRKCA-203ENST00000578063 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
PRKCA-203ENST00000578063 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
PRKCA-203ENST00000578063 MT1BP07438 61 aa7.98□□□□□ -1.13
PRKCA-203ENST00000578063 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
PRKCA-203ENST00000578063 ROMO1P60602 79 aa7.83□□□□□ -1.16
PRKCA-203ENST00000578063 USH2AO75445 5202 aa7.8□□□□□ -1.16
PRKCA-203ENST00000578063 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
PRKCA-203ENST00000578063 MT1XP80297 61 aa7.71□□□□□ -1.18
PRKCA-203ENST00000578063 H3BS24 57 aa7.7□□□□□ -1.18
PRKCA-203ENST00000578063 KTN1-AS1Q86SY8 53 aa7.7□□□□□ -1.18
PRKCA-203ENST00000578063 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
PRKCA-203ENST00000578063 KRTAP10-5P60370 271 aa7.68□□□□□ -1.18
PRKCA-203ENST00000578063 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
PRKCA-203ENST00000578063 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
PRKCA-203ENST00000578063 TNP1P09430 55 aa7.57□□□□□ -1.2
PRKCA-203ENST00000578063 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
PRKCA-203ENST00000578063 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
PRKCA-203ENST00000578063 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
PRKCA-203ENST00000578063 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
PRKCA-203ENST00000578063 LCE5AQ5TCM9 118 aa7.35□□□□□ -1.23
PRKCA-203ENST00000578063 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
PRKCA-203ENST00000578063 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
PRKCA-203ENST00000578063 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
PRKCA-203ENST00000578063 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
PRKCA-203ENST00000578063 FCGBPQ9Y6R7 5405 aaPredicted RBP7.27□□□□□ -1.25
PRKCA-203ENST00000578063 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms