RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
LITAF-209ENST00000571688 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
LITAF-209ENST00000571688 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
LITAF-209ENST00000571688 S4R3F8 94 aa8.55□□□□□ -1.04
LITAF-209ENST00000571688 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
LITAF-209ENST00000571688 FAT1Q14517 4588 aa8.53□□□□□ -1.04
LITAF-209ENST00000571688 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
LITAF-209ENST00000571688 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
LITAF-209ENST00000571688 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
LITAF-209ENST00000571688 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
LITAF-209ENST00000571688 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
LITAF-209ENST00000571688 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.06
LITAF-209ENST00000571688 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
LITAF-209ENST00000571688 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
LITAF-209ENST00000571688 HSPG2P98160 4391 aa8.42□□□□□ -1.06
LITAF-209ENST00000571688 TNXBP22105 4242 aa8.41□□□□□ -1.06
LITAF-209ENST00000571688 XP32Q5T750 250 aa8.4□□□□□ -1.07
LITAF-209ENST00000571688 A0A1B0GVY2 172 aa8.25□□□□□ -1.09
LITAF-209ENST00000571688 M0QZ58 72 aa8.24□□□□□ -1.09
LITAF-209ENST00000571688 MYCBP2O75592 4640 aa8.17□□□□□ -1.1
LITAF-209ENST00000571688 LPAP08519 4548 aa8.04□□□□□ -1.12
LITAF-209ENST00000571688 PLAC4Q8WY50 150 aa8□□□□□ -1.13
LITAF-209ENST00000571688 KMT2CQ8NEZ4 4911 aaKnown RBP7.96□□□□□ -1.13
LITAF-209ENST00000571688 RYR2Q92736 4967 aa7.95□□□□□ -1.14
LITAF-209ENST00000571688 R4GN34 69 aa7.92□□□□□ -1.14
LITAF-209ENST00000571688 Q5VSD8 79 aa7.9□□□□□ -1.14
LITAF-209ENST00000571688 LRP2P98164 4655 aa7.88□□□□□ -1.15
LITAF-209ENST00000571688 A0A0A0MQY5 61 aa7.87□□□□□ -1.15
LITAF-209ENST00000571688 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
LITAF-209ENST00000571688 MT1HL1P0DM35 61 aa7.8□□□□□ -1.16
LITAF-209ENST00000571688 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
LITAF-209ENST00000571688 RYR1P21817 5038 aa7.76□□□□□ -1.17
LITAF-209ENST00000571688 PP632Q6XCG6 107 aa7.74□□□□□ -1.17
LITAF-209ENST00000571688 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
LITAF-209ENST00000571688 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
LITAF-209ENST00000571688 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
LITAF-209ENST00000571688 KIAA1109Q2LD37 5005 aa7.49□□□□□ -1.21
LITAF-209ENST00000571688 RYR3Q15413 4870 aa7.48□□□□□ -1.21
LITAF-209ENST00000571688 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
LITAF-209ENST00000571688 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
LITAF-209ENST00000571688 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
LITAF-209ENST00000571688 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
LITAF-209ENST00000571688 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
LITAF-209ENST00000571688 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.23
LITAF-209ENST00000571688 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
LITAF-209ENST00000571688 TNP1P09430 55 aa7.36□□□□□ -1.23
LITAF-209ENST00000571688 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
LITAF-209ENST00000571688 HERC1Q15751 4861 aa7.2□□□□□ -1.26
LITAF-209ENST00000571688 J3QL48 77 aa7.16□□□□□ -1.26
LITAF-209ENST00000571688 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
LITAF-209ENST00000571688 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
LITAF-209ENST00000571688 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
LITAF-209ENST00000571688 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
LITAF-209ENST00000571688 MUC2Q02817 5179 aa6.98□□□□□ -1.29
LITAF-209ENST00000571688 PCLOQ9Y6V0 5065 aa6.94□□□□□ -1.3
LITAF-209ENST00000571688 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
LITAF-209ENST00000571688 SPRR2GQ9BYE4 73 aa6.91□□□□□ -1.3
LITAF-209ENST00000571688 BIRC6Q9NR09 4857 aa6.89□□□□□ -1.31
LITAF-209ENST00000571688 INE1O15225 51 aa6.88□□□□□ -1.31
LITAF-209ENST00000571688 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
LITAF-209ENST00000571688 HERC2O95714 4834 aa6.79□□□□□ -1.32
LITAF-209ENST00000571688 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
LITAF-209ENST00000571688 LCE2CQ5TA81 110 aa6.71□□□□□ -1.33
LITAF-209ENST00000571688 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
LITAF-209ENST00000571688 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
LITAF-209ENST00000571688 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
LITAF-209ENST00000571688 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
LITAF-209ENST00000571688 MT1FP04733 61 aa6.53□□□□□ -1.36
LITAF-209ENST00000571688 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
LITAF-209ENST00000571688 KRTAP19-8Q3LI54 63 aa6.53□□□□□ -1.36
LITAF-209ENST00000571688 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
LITAF-209ENST00000571688 M0R2T5 61 aa6.51□□□□□ -1.37
LITAF-209ENST00000571688 MT2AP02795 61 aa6.51□□□□□ -1.37
LITAF-209ENST00000571688 MT1XP80297 61 aa6.49□□□□□ -1.37
LITAF-209ENST00000571688 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
LITAF-209ENST00000571688 MT1HP80294 61 aa6.48□□□□□ -1.37
LITAF-209ENST00000571688 MT1BP07438 61 aa6.43□□□□□ -1.38
LITAF-209ENST00000571688 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
LITAF-209ENST00000571688 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
LITAF-209ENST00000571688 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
LITAF-209ENST00000571688 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
LITAF-209ENST00000571688 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
LITAF-209ENST00000571688 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
LITAF-209ENST00000571688 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
LITAF-209ENST00000571688 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
LITAF-209ENST00000571688 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
LITAF-209ENST00000571688 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
LITAF-209ENST00000571688 KMT2DO14686 5537 aa5.91□□□□□ -1.46
LITAF-209ENST00000571688 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
LITAF-209ENST00000571688 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
LITAF-209ENST00000571688 LCE2BO14633 110 aa5.8□□□□□ -1.48
LITAF-209ENST00000571688 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
LITAF-209ENST00000571688 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
LITAF-209ENST00000571688 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
LITAF-209ENST00000571688 USH2AO75445 5202 aa5.7□□□□□ -1.5
LITAF-209ENST00000571688 MT1LQ93083 61 aa5.65□□□□□ -1.51
LITAF-209ENST00000571688 MT1EP04732 61 aa5.58□□□□□ -1.52
LITAF-209ENST00000571688 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
LITAF-209ENST00000571688 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
LITAF-209ENST00000571688 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms