RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
PDXDC1-216ENST00000569715 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
PDXDC1-216ENST00000569715 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
PDXDC1-216ENST00000569715 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
PDXDC1-216ENST00000569715 A0A1B0GU69 56 aa5.65□□□□□ -1.5
PDXDC1-216ENST00000569715 LCA10Q71F78 164 aa5.65□□□□□ -1.5
PDXDC1-216ENST00000569715 ACYP2P14621 99 aa5.64□□□□□ -1.51
PDXDC1-216ENST00000569715 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
PDXDC1-216ENST00000569715 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
PDXDC1-216ENST00000569715 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
PDXDC1-216ENST00000569715 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
PDXDC1-216ENST00000569715 COX6B2Q6YFQ2 88 aa5.59□□□□□ -1.51
PDXDC1-216ENST00000569715 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
PDXDC1-216ENST00000569715 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
PDXDC1-216ENST00000569715 MUC2Q02817 5179 aa5.54□□□□□ -1.52
PDXDC1-216ENST00000569715 UQCR11O14957 56 aa5.52□□□□□ -1.53
PDXDC1-216ENST00000569715 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
PDXDC1-216ENST00000569715 A6NN06 94 aa5.5□□□□□ -1.53
PDXDC1-216ENST00000569715 UBR4Q5T4S7 5183 aa5.5□□□□□ -1.53
PDXDC1-216ENST00000569715 ADM2Q7Z4H4 148 aa5.46□□□□□ -1.53
PDXDC1-216ENST00000569715 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
PDXDC1-216ENST00000569715 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
PDXDC1-216ENST00000569715 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
PDXDC1-216ENST00000569715 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
PDXDC1-216ENST00000569715 S4R3F8 94 aa5.42□□□□□ -1.54
PDXDC1-216ENST00000569715 KRTAP19-2Q3LHN2 52 aa5.42□□□□□ -1.54
PDXDC1-216ENST00000569715 K7ERS5 55 aa5.4□□□□□ -1.55
PDXDC1-216ENST00000569715 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
PDXDC1-216ENST00000569715 H3BS24 57 aa5.35□□□□□ -1.55
PDXDC1-216ENST00000569715 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
PDXDC1-216ENST00000569715 FAT4Q6V0I7 4981 aa5.31□□□□□ -1.56
PDXDC1-216ENST00000569715 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
PDXDC1-216ENST00000569715 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
PDXDC1-216ENST00000569715 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
PDXDC1-216ENST00000569715 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
PDXDC1-216ENST00000569715 A0A1B0GU33 70 aa5.23□□□□□ -1.57
PDXDC1-216ENST00000569715 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
PDXDC1-216ENST00000569715 P0C880 135 aa5.21□□□□□ -1.58
PDXDC1-216ENST00000569715 A0A0D9SG42 100 aa5.2□□□□□ -1.58
PDXDC1-216ENST00000569715 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
PDXDC1-216ENST00000569715 MT1HP80294 61 aa5.16□□□□□ -1.58
PDXDC1-216ENST00000569715 H0YAA0 97 aa5.14□□□□□ -1.59
PDXDC1-216ENST00000569715 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
PDXDC1-216ENST00000569715 M0R2T5 61 aa5.1□□□□□ -1.59
PDXDC1-216ENST00000569715 LORP23490 312 aaPredicted RBP5.09□□□□□ -1.59
PDXDC1-216ENST00000569715 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
PDXDC1-216ENST00000569715 ROMO1P60602 79 aa5.02□□□□□ -1.61
PDXDC1-216ENST00000569715 M0QZ58 72 aa5.01□□□□□ -1.61
PDXDC1-216ENST00000569715 R4GN34 69 aa4.99□□□□□ -1.61
PDXDC1-216ENST00000569715 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
PDXDC1-216ENST00000569715 MT2AP02795 61 aa4.97□□□□□ -1.61
PDXDC1-216ENST00000569715 MT1FP04733 61 aa4.95□□□□□ -1.62
PDXDC1-216ENST00000569715 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
PDXDC1-216ENST00000569715 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
PDXDC1-216ENST00000569715 KRTAP12-2P59991 146 aa4.9□□□□□ -1.62
PDXDC1-216ENST00000569715 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.62
PDXDC1-216ENST00000569715 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
PDXDC1-216ENST00000569715 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
PDXDC1-216ENST00000569715 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
PDXDC1-216ENST00000569715 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
PDXDC1-216ENST00000569715 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
PDXDC1-216ENST00000569715 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
PDXDC1-216ENST00000569715 MT1BP07438 61 aa4.69□□□□□ -1.66
PDXDC1-216ENST00000569715 LCE2BO14633 110 aa4.68□□□□□ -1.66
PDXDC1-216ENST00000569715 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
PDXDC1-216ENST00000569715 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
PDXDC1-216ENST00000569715 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
PDXDC1-216ENST00000569715 USH2AO75445 5202 aa4.62□□□□□ -1.67
PDXDC1-216ENST00000569715 MT1XP80297 61 aa4.54□□□□□ -1.68
PDXDC1-216ENST00000569715 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
PDXDC1-216ENST00000569715 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
PDXDC1-216ENST00000569715 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
PDXDC1-216ENST00000569715 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
PDXDC1-216ENST00000569715 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
PDXDC1-216ENST00000569715 TNP1P09430 55 aa4.43□□□□□ -1.7
PDXDC1-216ENST00000569715 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
PDXDC1-216ENST00000569715 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.7
PDXDC1-216ENST00000569715 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
PDXDC1-216ENST00000569715 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.72
PDXDC1-216ENST00000569715 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
PDXDC1-216ENST00000569715 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
PDXDC1-216ENST00000569715 KMT2DO14686 5537 aa4.29□□□□□ -1.72
PDXDC1-216ENST00000569715 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
PDXDC1-216ENST00000569715 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
PDXDC1-216ENST00000569715 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
PDXDC1-216ENST00000569715 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
PDXDC1-216ENST00000569715 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
PDXDC1-216ENST00000569715 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
PDXDC1-216ENST00000569715 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
PDXDC1-216ENST00000569715 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
PDXDC1-216ENST00000569715 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
PDXDC1-216ENST00000569715 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
PDXDC1-216ENST00000569715 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
PDXDC1-216ENST00000569715 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
PDXDC1-216ENST00000569715 MT1EP04732 61 aa3.97□□□□□ -1.77
PDXDC1-216ENST00000569715 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
PDXDC1-216ENST00000569715 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
PDXDC1-216ENST00000569715 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
PDXDC1-216ENST00000569715 MT1LQ93083 61 aa3.89□□□□□ -1.79
PDXDC1-216ENST00000569715 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms