RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 SEC61GP60059 68 aa9.34□□□□□ -0.91
NEIL1-221ENST00000569035 XP32Q5T750 250 aa9.33□□□□□ -0.92
NEIL1-221ENST00000569035 LRP2P98164 4655 aa9.28□□□□□ -0.92
NEIL1-221ENST00000569035 TPRXLQ17RH7 258 aa9.27□□□□□ -0.92
NEIL1-221ENST00000569035 LCA10Q71F78 164 aa9.27□□□□□ -0.93
NEIL1-221ENST00000569035 UQCR11O14957 56 aa9.26□□□□□ -0.93
NEIL1-221ENST00000569035 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
NEIL1-221ENST00000569035 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
NEIL1-221ENST00000569035 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
NEIL1-221ENST00000569035 PMAIP1Q13794 54 aa9.17□□□□□ -0.94
NEIL1-221ENST00000569035 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
NEIL1-221ENST00000569035 A8MU10 97 aa9.13□□□□□ -0.95
NEIL1-221ENST00000569035 MUC17Q685J3 4493 aa9.04□□□□□ -0.96
NEIL1-221ENST00000569035 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
NEIL1-221ENST00000569035 S4R3F8 94 aa9.01□□□□□ -0.97
NEIL1-221ENST00000569035 A6NN06 94 aa9.01□□□□□ -0.97
NEIL1-221ENST00000569035 H1FX-AS1Q4G0G2 97 aa9□□□□□ -0.97
NEIL1-221ENST00000569035 A0A1B0GU33 70 aa8.99□□□□□ -0.97
NEIL1-221ENST00000569035 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
NEIL1-221ENST00000569035 SEC61BP60468 96 aaKnown RBP8.98□□□□□ -0.97
NEIL1-221ENST00000569035 KTN1-AS1Q86SY8 53 aa8.96□□□□□ -0.98
NEIL1-221ENST00000569035 MUC2Q02817 5179 aa8.95□□□□□ -0.98
NEIL1-221ENST00000569035 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
NEIL1-221ENST00000569035 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
NEIL1-221ENST00000569035 H0YAA0 97 aa8.82□□□□□ -1
NEIL1-221ENST00000569035 CSAG1Q6PB30 78 aa8.81□□□□□ -1
NEIL1-221ENST00000569035 K7ERS5 55 aa8.79□□□□□ -1
NEIL1-221ENST00000569035 KRTAP10-6P60371 365 aaPredicted RBP8.73□□□□□ -1.01
NEIL1-221ENST00000569035 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
NEIL1-221ENST00000569035 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
NEIL1-221ENST00000569035 M0QZ58 72 aa8.6□□□□□ -1.03
NEIL1-221ENST00000569035 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
NEIL1-221ENST00000569035 P0C880 135 aa8.56□□□□□ -1.04
NEIL1-221ENST00000569035 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
NEIL1-221ENST00000569035 KRTAP13-4Q3LI77 160 aa8.48□□□□□ -1.05
NEIL1-221ENST00000569035 FLGP20930 4061 aaPredicted RBP8.48□□□□□ -1.05
NEIL1-221ENST00000569035 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
NEIL1-221ENST00000569035 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
NEIL1-221ENST00000569035 A0A0D9SG42 100 aa8.41□□□□□ -1.06
NEIL1-221ENST00000569035 ROMO1P60602 79 aa8.37□□□□□ -1.07
NEIL1-221ENST00000569035 R4GN34 69 aa8.35□□□□□ -1.07
NEIL1-221ENST00000569035 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
NEIL1-221ENST00000569035 KRTAP12-1P59990 96 aa8.28□□□□□ -1.08
NEIL1-221ENST00000569035 MT1HP80294 61 aa8.27□□□□□ -1.08
NEIL1-221ENST00000569035 LINC01554Q52M75 96 aa8.26□□□□□ -1.09
NEIL1-221ENST00000569035 SPINT4Q6UDR6 99 aa8.25□□□□□ -1.09
NEIL1-221ENST00000569035 KRTAP25-1Q3LHN0 102 aa8.24□□□□□ -1.09
NEIL1-221ENST00000569035 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
NEIL1-221ENST00000569035 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
NEIL1-221ENST00000569035 M0R2T5 61 aa8.2□□□□□ -1.1
NEIL1-221ENST00000569035 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
NEIL1-221ENST00000569035 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
NEIL1-221ENST00000569035 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
NEIL1-221ENST00000569035 MT2AP02795 61 aa7.89□□□□□ -1.15
NEIL1-221ENST00000569035 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
NEIL1-221ENST00000569035 MT1FP04733 61 aa7.85□□□□□ -1.15
NEIL1-221ENST00000569035 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
NEIL1-221ENST00000569035 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
NEIL1-221ENST00000569035 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
NEIL1-221ENST00000569035 FSIP2Q5CZC0 6907 aa7.78□□□□□ -1.16
NEIL1-221ENST00000569035 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
NEIL1-221ENST00000569035 PP632Q6XCG6 107 aa7.74□□□□□ -1.17
NEIL1-221ENST00000569035 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
NEIL1-221ENST00000569035 PLAC4Q8WY50 150 aa7.71□□□□□ -1.17
NEIL1-221ENST00000569035 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
NEIL1-221ENST00000569035 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
NEIL1-221ENST00000569035 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
NEIL1-221ENST00000569035 TNP1P09430 55 aa7.61□□□□□ -1.19
NEIL1-221ENST00000569035 CRCT1Q9UGL9 99 aa7.6□□□□□ -1.19
NEIL1-221ENST00000569035 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
NEIL1-221ENST00000569035 LCE2BO14633 110 aa7.5□□□□□ -1.21
NEIL1-221ENST00000569035 USH2AO75445 5202 aa7.5□□□□□ -1.21
NEIL1-221ENST00000569035 SSPOA2VEC9 5147 aa7.4□□□□□ -1.23
NEIL1-221ENST00000569035 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
NEIL1-221ENST00000569035 H3BS24 57 aa7.38□□□□□ -1.23
NEIL1-221ENST00000569035 MT1BP07438 61 aa7.38□□□□□ -1.23
NEIL1-221ENST00000569035 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
NEIL1-221ENST00000569035 FCGBPQ9Y6R7 5405 aaPredicted RBP7.18□□□□□ -1.26
NEIL1-221ENST00000569035 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
NEIL1-221ENST00000569035 MT1XP80297 61 aa7.15□□□□□ -1.26
NEIL1-221ENST00000569035 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
NEIL1-221ENST00000569035 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
NEIL1-221ENST00000569035 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
NEIL1-221ENST00000569035 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
NEIL1-221ENST00000569035 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
NEIL1-221ENST00000569035 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
NEIL1-221ENST00000569035 LUZP6Q538Z0 58 aa7□□□□□ -1.29
NEIL1-221ENST00000569035 MACF1Q9UPN3 7388 aaKnown RBP7□□□□□ -1.29
NEIL1-221ENST00000569035 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
NEIL1-221ENST00000569035 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
NEIL1-221ENST00000569035 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.31
NEIL1-221ENST00000569035 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
NEIL1-221ENST00000569035 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
NEIL1-221ENST00000569035 KMT2DO14686 5537 aa6.81□□□□□ -1.32
NEIL1-221ENST00000569035 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
NEIL1-221ENST00000569035 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
NEIL1-221ENST00000569035 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
NEIL1-221ENST00000569035 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
NEIL1-221ENST00000569035 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
NEIL1-221ENST00000569035 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms