RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
PKM-221ENST00000568743 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
PKM-221ENST00000568743 MP68P56378 58 aa4.96□□□□□ -1.62
PKM-221ENST00000568743 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
PKM-221ENST00000568743 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
PKM-221ENST00000568743 C5orf47Q569G3 176 aa4.94□□□□□ -1.62
PKM-221ENST00000568743 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
PKM-221ENST00000568743 H7BZZ5 65 aa4.91□□□□□ -1.62
PKM-221ENST00000568743 C20orf197Q8N268 126 aa4.91□□□□□ -1.62
PKM-221ENST00000568743 H3BPC8 53 aa4.9□□□□□ -1.63
PKM-221ENST00000568743 NDUFC1O43677 76 aa4.87□□□□□ -1.63
PKM-221ENST00000568743 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
PKM-221ENST00000568743 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
PKM-221ENST00000568743 S4R3F8 94 aa4.86□□□□□ -1.63
PKM-221ENST00000568743 MT2AP02795 61 aa4.84□□□□□ -1.63
PKM-221ENST00000568743 LCA10Q71F78 164 aa4.84□□□□□ -1.63
PKM-221ENST00000568743 ATP5EP56381 51 aaPredicted RBP4.83□□□□□ -1.64
PKM-221ENST00000568743 SNURFQ9Y675 71 aa4.83□□□□□ -1.64
PKM-221ENST00000568743 MT1FP04733 61 aa4.81□□□□□ -1.64
PKM-221ENST00000568743 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
PKM-221ENST00000568743 A8MUN3 132 aa4.79□□□□□ -1.64
PKM-221ENST00000568743 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
PKM-221ENST00000568743 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
PKM-221ENST00000568743 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
PKM-221ENST00000568743 DMAC1Q96GE9 116 aa4.76□□□□□ -1.65
PKM-221ENST00000568743 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
PKM-221ENST00000568743 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
PKM-221ENST00000568743 ACYP2P14621 99 aa4.68□□□□□ -1.66
PKM-221ENST00000568743 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
PKM-221ENST00000568743 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
PKM-221ENST00000568743 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
PKM-221ENST00000568743 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
PKM-221ENST00000568743 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
PKM-221ENST00000568743 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
PKM-221ENST00000568743 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
PKM-221ENST00000568743 CHKB-CPT1BH3BT56 60 aa4.62□□□□□ -1.67
PKM-221ENST00000568743 Q1T7F1 81 aa4.62□□□□□ -1.67
PKM-221ENST00000568743 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
PKM-221ENST00000568743 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
PKM-221ENST00000568743 H0YAA0 97 aa4.6□□□□□ -1.67
PKM-221ENST00000568743 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
PKM-221ENST00000568743 SPTSSBQ8NFR3 76 aa4.57□□□□□ -1.68
PKM-221ENST00000568743 COA5Q86WW8 74 aa4.56□□□□□ -1.68
PKM-221ENST00000568743 P0C880 135 aa4.55□□□□□ -1.68
PKM-221ENST00000568743 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
PKM-221ENST00000568743 V9GYY9 64 aa4.53□□□□□ -1.68
PKM-221ENST00000568743 USH2AO75445 5202 aa4.53□□□□□ -1.68
PKM-221ENST00000568743 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
PKM-221ENST00000568743 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
PKM-221ENST00000568743 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
PKM-221ENST00000568743 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
PKM-221ENST00000568743 Q5VV11 94 aa4.48□□□□□ -1.69
PKM-221ENST00000568743 MT1BP07438 61 aa4.47□□□□□ -1.69
PKM-221ENST00000568743 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
PKM-221ENST00000568743 PSPHP1O15172 72 aa4.46□□□□□ -1.7
PKM-221ENST00000568743 R4GN34 69 aa4.46□□□□□ -1.7
PKM-221ENST00000568743 M0QZ58 72 aa4.45□□□□□ -1.7
PKM-221ENST00000568743 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
PKM-221ENST00000568743 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
PKM-221ENST00000568743 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
PKM-221ENST00000568743 LINC01554Q52M75 96 aa4.4□□□□□ -1.71
PKM-221ENST00000568743 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
PKM-221ENST00000568743 SEC61GP60059 68 aa4.37□□□□□ -1.71
PKM-221ENST00000568743 A8MU10 97 aa4.36□□□□□ -1.71
PKM-221ENST00000568743 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
PKM-221ENST00000568743 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
PKM-221ENST00000568743 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
PKM-221ENST00000568743 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
PKM-221ENST00000568743 A6NN06 94 aa4.32□□□□□ -1.72
PKM-221ENST00000568743 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
PKM-221ENST00000568743 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
PKM-221ENST00000568743 A0A1B0GU69 56 aa4.31□□□□□ -1.72
PKM-221ENST00000568743 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
PKM-221ENST00000568743 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
PKM-221ENST00000568743 A6NED7 52 aa4.3□□□□□ -1.72
PKM-221ENST00000568743 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
PKM-221ENST00000568743 A0A1B0GU33 70 aa4.29□□□□□ -1.72
PKM-221ENST00000568743 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
PKM-221ENST00000568743 A0A0D9SG42 100 aa4.25□□□□□ -1.73
PKM-221ENST00000568743 MT1XP80297 61 aa4.25□□□□□ -1.73
PKM-221ENST00000568743 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
PKM-221ENST00000568743 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
PKM-221ENST00000568743 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
PKM-221ENST00000568743 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
PKM-221ENST00000568743 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
PKM-221ENST00000568743 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
PKM-221ENST00000568743 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
PKM-221ENST00000568743 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
PKM-221ENST00000568743 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
PKM-221ENST00000568743 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
PKM-221ENST00000568743 UQCR11O14957 56 aa4.13□□□□□ -1.75
PKM-221ENST00000568743 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
PKM-221ENST00000568743 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
PKM-221ENST00000568743 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
PKM-221ENST00000568743 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
PKM-221ENST00000568743 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
PKM-221ENST00000568743 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
PKM-221ENST00000568743 PRAC1Q96KF2 57 aa4□□□□□ -1.77
PKM-221ENST00000568743 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
PKM-221ENST00000568743 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms