RNA–Protein interactions for RNA: ENST00000568346.1

KLHDC4-221, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 343 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-221ENST00000568346 LCA10Q71F78 164 aa4.63□□□□□ -1.67
KLHDC4-221ENST00000568346 C9orf92A6NGG3 77 aa4.62□□□□□ -1.67
KLHDC4-221ENST00000568346 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
KLHDC4-221ENST00000568346 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
KLHDC4-221ENST00000568346 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
KLHDC4-221ENST00000568346 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
KLHDC4-221ENST00000568346 A8MU10 97 aa4.6□□□□□ -1.67
KLHDC4-221ENST00000568346 SPINK7P58062 85 aa4.6□□□□□ -1.67
KLHDC4-221ENST00000568346 A0A1B0GU69 56 aa4.59□□□□□ -1.67
KLHDC4-221ENST00000568346 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
KLHDC4-221ENST00000568346 TNXBP22105 4242 aa4.57□□□□□ -1.68
KLHDC4-221ENST00000568346 SPTSSBQ8NFR3 76 aa4.57□□□□□ -1.68
KLHDC4-221ENST00000568346 RPL37P61927 97 aaKnown RBP4.54□□□□□ -1.68
KLHDC4-221ENST00000568346 A6NN06 94 aa4.53□□□□□ -1.68
KLHDC4-221ENST00000568346 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
KLHDC4-221ENST00000568346 SPATA8Q6RVD6 105 aa4.53□□□□□ -1.68
KLHDC4-221ENST00000568346 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
KLHDC4-221ENST00000568346 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
KLHDC4-221ENST00000568346 UQCR11O14957 56 aa4.51□□□□□ -1.69
KLHDC4-221ENST00000568346 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
KLHDC4-221ENST00000568346 XP32Q5T750 250 aa4.49□□□□□ -1.69
KLHDC4-221ENST00000568346 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
KLHDC4-221ENST00000568346 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
KLHDC4-221ENST00000568346 SEC61GP60059 68 aa4.47□□□□□ -1.69
KLHDC4-221ENST00000568346 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
KLHDC4-221ENST00000568346 LPAP08519 4548 aa4.41□□□□□ -1.7
KLHDC4-221ENST00000568346 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
KLHDC4-221ENST00000568346 A0A1B0GU33 70 aa4.37□□□□□ -1.71
KLHDC4-221ENST00000568346 H0YAA0 97 aa4.37□□□□□ -1.71
KLHDC4-221ENST00000568346 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
KLHDC4-221ENST00000568346 S4R3F8 94 aa4.34□□□□□ -1.71
KLHDC4-221ENST00000568346 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
KLHDC4-221ENST00000568346 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
KLHDC4-221ENST00000568346 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
KLHDC4-221ENST00000568346 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
KLHDC4-221ENST00000568346 RBM12B-AS1Q9P1G2 102 aa4.28□□□□□ -1.72
KLHDC4-221ENST00000568346 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
KLHDC4-221ENST00000568346 K7ERS5 55 aa4.22□□□□□ -1.73
KLHDC4-221ENST00000568346 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
KLHDC4-221ENST00000568346 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
KLHDC4-221ENST00000568346 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
KLHDC4-221ENST00000568346 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
KLHDC4-221ENST00000568346 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
KLHDC4-221ENST00000568346 NEBP20929 6669 aa4.19□□□□□ -1.74
KLHDC4-221ENST00000568346 P0C880 135 aa4.19□□□□□ -1.74
KLHDC4-221ENST00000568346 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.74
KLHDC4-221ENST00000568346 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
KLHDC4-221ENST00000568346 M0QZ58 72 aa4.14□□□□□ -1.75
KLHDC4-221ENST00000568346 USH2AO75445 5202 aa4.12□□□□□ -1.75
KLHDC4-221ENST00000568346 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
KLHDC4-221ENST00000568346 ROMO1P60602 79 aa4.11□□□□□ -1.75
KLHDC4-221ENST00000568346 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
KLHDC4-221ENST00000568346 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
KLHDC4-221ENST00000568346 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
KLHDC4-221ENST00000568346 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
KLHDC4-221ENST00000568346 A0A0D9SG42 100 aa4.09□□□□□ -1.75
KLHDC4-221ENST00000568346 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
KLHDC4-221ENST00000568346 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
KLHDC4-221ENST00000568346 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
KLHDC4-221ENST00000568346 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
KLHDC4-221ENST00000568346 R4GN34 69 aa3.99□□□□□ -1.77
KLHDC4-221ENST00000568346 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
KLHDC4-221ENST00000568346 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
KLHDC4-221ENST00000568346 CRIPTQ9P021 101 aa3.92□□□□□ -1.78
KLHDC4-221ENST00000568346 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
KLHDC4-221ENST00000568346 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
KLHDC4-221ENST00000568346 KMT2DO14686 5537 aa3.88□□□□□ -1.79
KLHDC4-221ENST00000568346 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
KLHDC4-221ENST00000568346 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
KLHDC4-221ENST00000568346 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
KLHDC4-221ENST00000568346 MT1HP80294 61 aa3.79□□□□□ -1.8
KLHDC4-221ENST00000568346 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
KLHDC4-221ENST00000568346 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
KLHDC4-221ENST00000568346 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
KLHDC4-221ENST00000568346 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
KLHDC4-221ENST00000568346 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
KLHDC4-221ENST00000568346 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
KLHDC4-221ENST00000568346 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
KLHDC4-221ENST00000568346 MT2AP02795 61 aa3.68□□□□□ -1.82
KLHDC4-221ENST00000568346 M0R2T5 61 aa3.67□□□□□ -1.82
KLHDC4-221ENST00000568346 MT1FP04733 61 aa3.66□□□□□ -1.82
KLHDC4-221ENST00000568346 TNP1P09430 55 aa3.66□□□□□ -1.82
KLHDC4-221ENST00000568346 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
KLHDC4-221ENST00000568346 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
KLHDC4-221ENST00000568346 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
KLHDC4-221ENST00000568346 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
KLHDC4-221ENST00000568346 LCE2BO14633 110 aa3.6□□□□□ -1.83
KLHDC4-221ENST00000568346 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
KLHDC4-221ENST00000568346 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
KLHDC4-221ENST00000568346 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
KLHDC4-221ENST00000568346 MT1BP07438 61 aa3.55□□□□□ -1.84
KLHDC4-221ENST00000568346 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
KLHDC4-221ENST00000568346 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
KLHDC4-221ENST00000568346 H3BS24 57 aa3.51□□□□□ -1.85
KLHDC4-221ENST00000568346 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
KLHDC4-221ENST00000568346 MT1XP80297 61 aa3.48□□□□□ -1.85
KLHDC4-221ENST00000568346 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
KLHDC4-221ENST00000568346 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
KLHDC4-221ENST00000568346 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
KLHDC4-221ENST00000568346 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms