RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 LINC00208Q96KT6 92 aa11.54□□□□□ -0.56
FANCA-228ENST00000567943 KRTAP3-3Q9BYR6 98 aa11.54□□□□□ -0.56
FANCA-228ENST00000567943 MP68P56378 58 aa11.49□□□□□ -0.57
FANCA-228ENST00000567943 SYNE2Q8WXH0 6885 aaKnown RBP11.47□□□□□ -0.57
FANCA-228ENST00000567943 KLKP1Q107X0 134 aa11.46□□□□□ -0.57
FANCA-228ENST00000567943 SCGB1A1P11684 91 aa11.4□□□□□ -0.58
FANCA-228ENST00000567943 A8MUN3 132 aa11.38□□□□□ -0.59
FANCA-228ENST00000567943 NDUFC1O43677 76 aa11.35□□□□□ -0.59
FANCA-228ENST00000567943 H3BPC8 53 aa11.32□□□□□ -0.6
FANCA-228ENST00000567943 SPRR2GQ9BYE4 73 aa11.32□□□□□ -0.6
FANCA-228ENST00000567943 MT1BP07438 61 aa11.31□□□□□ -0.6
FANCA-228ENST00000567943 K7ERU9 68 aa11.3□□□□□ -0.6
FANCA-228ENST00000567943 MT-ATP8P03928 68 aa11.28□□□□□ -0.6
FANCA-228ENST00000567943 IMUPQ9GZP8 106 aa11.28□□□□□ -0.6
FANCA-228ENST00000567943 KRTAP19-8Q3LI54 63 aa11.26□□□□□ -0.61
FANCA-228ENST00000567943 Q5VV11 94 aa11.21□□□□□ -0.61
FANCA-228ENST00000567943 H0YAA0 97 aa11.18□□□□□ -0.62
FANCA-228ENST00000567943 CRIPTQ9P021 101 aa11.17□□□□□ -0.62
FANCA-228ENST00000567943 DMAC1Q96GE9 116 aa11.13□□□□□ -0.63
FANCA-228ENST00000567943 ADM2Q7Z4H4 148 aa11.1□□□□□ -0.63
FANCA-228ENST00000567943 TRAV7A0A075B6U4 112 aa11.09□□□□□ -0.63
FANCA-228ENST00000567943 SMIM20Q8N5G0 67 aa11.09□□□□□ -0.63
FANCA-228ENST00000567943 A6NN06 94 aa11.08□□□□□ -0.64
FANCA-228ENST00000567943 KRTAP6-3Q3LI67 103 aa11.08□□□□□ -0.64
FANCA-228ENST00000567943 KRTAP10-5P60370 271 aa11.01□□□□□ -0.65
FANCA-228ENST00000567943 ACYP2P14621 99 aa10.89□□□□□ -0.67
FANCA-228ENST00000567943 SNURFQ9Y675 71 aa10.88□□□□□ -0.67
FANCA-228ENST00000567943 P0C880 135 aa10.87□□□□□ -0.67
FANCA-228ENST00000567943 C20orf197Q8N268 126 aa10.84□□□□□ -0.67
FANCA-228ENST00000567943 R4GN34 69 aa10.8□□□□□ -0.68
FANCA-228ENST00000567943 MUC12Q9UKN1 5478 aa10.79□□□□□ -0.68
FANCA-228ENST00000567943 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
FANCA-228ENST00000567943 NEBP20929 6669 aa10.77□□□□□ -0.68
FANCA-228ENST00000567943 SERP2Q8N6R1 65 aa10.77□□□□□ -0.69
FANCA-228ENST00000567943 M0QZ58 72 aa10.73□□□□□ -0.69
FANCA-228ENST00000567943 SPTSSBQ8NFR3 76 aa10.73□□□□□ -0.69
FANCA-228ENST00000567943 CHKB-CPT1BH3BT56 60 aa10.71□□□□□ -0.69
FANCA-228ENST00000567943 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
FANCA-228ENST00000567943 PLAC4Q8WY50 150 aa10.66□□□□□ -0.7
FANCA-228ENST00000567943 KRTAP5-9P26371 169 aa10.61□□□□□ -0.71
FANCA-228ENST00000567943 MT1XP80297 61 aa10.6□□□□□ -0.71
FANCA-228ENST00000567943 LINC01554Q52M75 96 aa10.59□□□□□ -0.71
FANCA-228ENST00000567943 KMT2DO14686 5537 aa10.59□□□□□ -0.71
FANCA-228ENST00000567943 PRO2289Q9P1D8 64 aa10.56□□□□□ -0.72
FANCA-228ENST00000567943 MDN1Q9NU22 5596 aa10.5□□□□□ -0.73
FANCA-228ENST00000567943 COX7CP15954 63 aa10.48□□□□□ -0.73
FANCA-228ENST00000567943 COA5Q86WW8 74 aa10.39□□□□□ -0.75
FANCA-228ENST00000567943 CYSTM1Q9H1C7 97 aa10.32□□□□□ -0.76
FANCA-228ENST00000567943 KRTAP12-2P59991 146 aa10.3□□□□□ -0.76
FANCA-228ENST00000567943 H7BZZ5 65 aa10.29□□□□□ -0.76
FANCA-228ENST00000567943 SPRR2FQ96RM1 72 aa10.25□□□□□ -0.77
FANCA-228ENST00000567943 KRTAP20-1Q3LI63 56 aa10.23□□□□□ -0.77
FANCA-228ENST00000567943 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
FANCA-228ENST00000567943 ANAPC13Q9BS18 74 aa10.2□□□□□ -0.78
FANCA-228ENST00000567943 KRTAP8-1Q8IUC2 63 aa10.19□□□□□ -0.78
FANCA-228ENST00000567943 KRTAP4-8A0A0G2JLE6 195 aa10.17□□□□□ -0.78
FANCA-228ENST00000567943 KRTAP4-8Q9BYQ9 185 aa10.17□□□□□ -0.78
FANCA-228ENST00000567943 SEC61GP60059 68 aa10.14□□□□□ -0.79
FANCA-228ENST00000567943 SERP1Q9Y6X1 66 aa10.13□□□□□ -0.79
FANCA-228ENST00000567943 KRTAP10-7P60409 375 aaPredicted RBP10.11□□□□□ -0.79
FANCA-228ENST00000567943 SPRR2EP22531 72 aa10.09□□□□□ -0.79
FANCA-228ENST00000567943 SPRR2BP35325 72 aa10.09□□□□□ -0.79
FANCA-228ENST00000567943 SPRR2AP35326 72 aa10.09□□□□□ -0.79
FANCA-228ENST00000567943 KRTAP10-12P60413 245 aa10.05□□□□□ -0.8
FANCA-228ENST00000567943 LCE1AQ5T7P2 110 aa10.02□□□□□ -0.81
FANCA-228ENST00000567943 CCDC179H3BU77 68 aa10.01□□□□□ -0.81
FANCA-228ENST00000567943 KRTAP2-3P0C7H8 128 aa9.97□□□□□ -0.81
FANCA-228ENST00000567943 CAMK2N1Q7Z7J9 78 aa9.97□□□□□ -0.81
FANCA-228ENST00000567943 KRTAP2-4Q9BYR9 128 aa9.97□□□□□ -0.81
FANCA-228ENST00000567943 A0A1B0GU33 70 aa9.96□□□□□ -0.82
FANCA-228ENST00000567943 A0A0D9SG42 100 aa9.95□□□□□ -0.82
FANCA-228ENST00000567943 SPATA8Q6RVD6 105 aa9.95□□□□□ -0.82
FANCA-228ENST00000567943 A0A1B0GU69 56 aa9.86□□□□□ -0.83
FANCA-228ENST00000567943 ATP5EP56381 51 aaPredicted RBP9.8□□□□□ -0.84
FANCA-228ENST00000567943 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
FANCA-228ENST00000567943 SPRR2DP22532 72 aa9.74□□□□□ -0.85
FANCA-228ENST00000567943 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
FANCA-228ENST00000567943 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
FANCA-228ENST00000567943 KRTAP2-2Q9BYT5 123 aa9.65□□□□□ -0.86
FANCA-228ENST00000567943 KRTAP2-1Q9BYU5 128 aa9.65□□□□□ -0.86
FANCA-228ENST00000567943 A8MU10 97 aa9.62□□□□□ -0.87
FANCA-228ENST00000567943 TMEM258P61165 79 aa9.61□□□□□ -0.87
FANCA-228ENST00000567943 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
FANCA-228ENST00000567943 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
FANCA-228ENST00000567943 LCE3BQ5TA77 95 aa9.5□□□□□ -0.89
FANCA-228ENST00000567943 KRTAP19-7Q3SYF9 63 aa9.48□□□□□ -0.89
FANCA-228ENST00000567943 MT1EP04732 61 aa9.38□□□□□ -0.91
FANCA-228ENST00000567943 LCE5AQ5TCM9 118 aa9.33□□□□□ -0.92
FANCA-228ENST00000567943 C10orf95Q9H7T3 257 aa9.3□□□□□ -0.92
FANCA-228ENST00000567943 UQCR11O14957 56 aa9.29□□□□□ -0.92
FANCA-228ENST00000567943 KRTAP19-3Q7Z4W3 81 aa9.27□□□□□ -0.93
FANCA-228ENST00000567943 KRTAP19-5Q3LI72 72 aa9.25□□□□□ -0.93
FANCA-228ENST00000567943 DSTQ03001 7570 aaKnown RBP9.24□□□□□ -0.93
FANCA-228ENST00000567943 TNP1P09430 55 aa9.22□□□□□ -0.93
FANCA-228ENST00000567943 LCE3AQ5TA76 89 aa9.13□□□□□ -0.95
FANCA-228ENST00000567943 MIR22HGQ0VDD5 57 aa9.1□□□□□ -0.95
FANCA-228ENST00000567943 V9GYY9 64 aa9.06□□□□□ -0.96
FANCA-228ENST00000567943 PSPHP1O15172 72 aa9.04□□□□□ -0.96
FANCA-228ENST00000567943 MT1GP13640 62 aa9.04□□□□□ -0.96
FANCA-228ENST00000567943 Q1T7F1 81 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms