RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 LCE2CQ5TA81 110 aa2.06□□□□□ -2.08
MACF1-232ENST00000567887 ZFHX4Q86UP3 3567 aa2.05□□□□□ -2.08
MACF1-232ENST00000567887 MT2AP02795 61 aa2.04□□□□□ -2.08
MACF1-232ENST00000567887 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
MACF1-232ENST00000567887 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
MACF1-232ENST00000567887 PRM1P04553 51 aa2.01□□□□□ -2.09
MACF1-232ENST00000567887 MT3P25713 68 aa2.01□□□□□ -2.09
MACF1-232ENST00000567887 LCE2DQ5TA82 110 aaPredicted RBP2.01□□□□□ -2.09
MACF1-232ENST00000567887 MT1FP04733 61 aa2□□□□□ -2.09
MACF1-232ENST00000567887 MT4P47944 62 aa1.99□□□□□ -2.09
MACF1-232ENST00000567887 MUC3AQ02505 3323 aa1.99□□□□□ -2.09
MACF1-232ENST00000567887 LCE1DQ5T752 114 aa1.96□□□□□ -2.09
MACF1-232ENST00000567887 KRTAP4-8A0A0G2JLE6 195 aa1.96□□□□□ -2.1
MACF1-232ENST00000567887 KRTAP4-8Q9BYQ9 185 aa1.96□□□□□ -2.1
MACF1-232ENST00000567887 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
MACF1-232ENST00000567887 TRRAPQ9Y4A5 3859 aa1.95□□□□□ -2.1
MACF1-232ENST00000567887 WDFY3Q8IZQ1 3526 aa1.93□□□□□ -2.1
MACF1-232ENST00000567887 NBPF19A0A087WUL8 3843 aa1.93□□□□□ -2.1
MACF1-232ENST00000567887 KRTAP4-7Q9BYR0 210 aa1.93□□□□□ -2.1
MACF1-232ENST00000567887 AKAP9Q99996 3911 aa1.92□□□□□ -2.1
MACF1-232ENST00000567887 LCE5AQ5TCM9 118 aa1.9□□□□□ -2.1
MACF1-232ENST00000567887 LAMA5O15230 3695 aa1.9□□□□□ -2.11
MACF1-232ENST00000567887 SPTBN5Q9NRC6 3674 aaKnown RBP1.9□□□□□ -2.11
MACF1-232ENST00000567887 LCE4AQ5TA78 99 aa1.9□□□□□ -2.11
MACF1-232ENST00000567887 BSNQ9UPA5 3926 aa1.89□□□□□ -2.11
MACF1-232ENST00000567887 DNAH2Q9P225 4427 aa1.89□□□□□ -2.11
MACF1-232ENST00000567887 SPENQ96T58 3664 aaKnown RBP1.88□□□□□ -2.11
MACF1-232ENST00000567887 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
MACF1-232ENST00000567887 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
MACF1-232ENST00000567887 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
MACF1-232ENST00000567887 LCE1AQ5T7P2 110 aa1.88□□□□□ -2.11
MACF1-232ENST00000567887 RELNP78509 3460 aa1.88□□□□□ -2.11
MACF1-232ENST00000567887 LOC100996750A0A140TA64 210 aa1.87□□□□□ -2.11
MACF1-232ENST00000567887 ANK2Q01484 3957 aa1.86□□□□□ -2.11
MACF1-232ENST00000567887 MT1XP80297 61 aa1.85□□□□□ -2.11
MACF1-232ENST00000567887 SMG1Q96Q15 3661 aaKnown RBP1.85□□□□□ -2.11
MACF1-232ENST00000567887 ASPMQ8IZT6 3477 aa1.85□□□□□ -2.11
MACF1-232ENST00000567887 HUWE1Q7Z6Z7 4374 aaKnown RBP1.84□□□□□ -2.12
MACF1-232ENST00000567887 KRTAP19-1Q8IUB9 90 aa1.83□□□□□ -2.12
MACF1-232ENST00000567887 KRTAP4-9Q9BYQ8 210 aa1.83□□□□□ -2.12
MACF1-232ENST00000567887 CUBNO60494 3623 aa1.82□□□□□ -2.12
MACF1-232ENST00000567887 ZNF469Q96JG9 3925 aaPredicted RBP1.8□□□□□ -2.12
MACF1-232ENST00000567887 CMYA5Q8N3K9 4069 aa1.79□□□□□ -2.12
MACF1-232ENST00000567887 MT1LQ93083 61 aa1.79□□□□□ -2.12
MACF1-232ENST00000567887 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.12
MACF1-232ENST00000567887 DMDP11532 3685 aa1.77□□□□□ -2.13
MACF1-232ENST00000567887 CSMD3Q7Z407 3707 aa1.77□□□□□ -2.13
MACF1-232ENST00000567887 KRTAP4-3Q9BYR4 195 aa1.77□□□□□ -2.13
MACF1-232ENST00000567887 CSMD2Q7Z408 3487 aa1.76□□□□□ -2.13
MACF1-232ENST00000567887 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
MACF1-232ENST00000567887 DNAH1Q9P2D7 4330 aa1.76□□□□□ -2.13
MACF1-232ENST00000567887 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
MACF1-232ENST00000567887 DNAH10Q8IVF4 4471 aa1.74□□□□□ -2.13
MACF1-232ENST00000567887 VPS13DQ5THJ4 4388 aa1.73□□□□□ -2.13
MACF1-232ENST00000567887 CSMD1Q96PZ7 3565 aa1.72□□□□□ -2.13
MACF1-232ENST00000567887 DNAH7Q8WXX0 4024 aa1.72□□□□□ -2.13
MACF1-232ENST00000567887 VPS13CQ709C8 3753 aa1.72□□□□□ -2.13
MACF1-232ENST00000567887 MT1BP07438 61 aa1.72□□□□□ -2.13
MACF1-232ENST00000567887 HECTD4Q9Y4D8 3996 aa1.71□□□□□ -2.14
MACF1-232ENST00000567887 KRTAP9-8Q9BYQ0 159 aa1.71□□□□□ -2.14
MACF1-232ENST00000567887 MT1EP04732 61 aa1.7□□□□□ -2.14
MACF1-232ENST00000567887 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
MACF1-232ENST00000567887 DNAH3Q8TD57 4116 aa1.7□□□□□ -2.14
MACF1-232ENST00000567887 KRTAP9-3Q9BYQ3 159 aa1.69□□□□□ -2.14
MACF1-232ENST00000567887 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
MACF1-232ENST00000567887 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
MACF1-232ENST00000567887 FLGP20930 4061 aaPredicted RBP1.66□□□□□ -2.14
MACF1-232ENST00000567887 LCE2AQ5TA79 106 aaPredicted RBP1.66□□□□□ -2.14
MACF1-232ENST00000567887 LRP1Q07954 4544 aaKnown RBP1.66□□□□□ -2.14
MACF1-232ENST00000567887 MT1MQ8N339 61 aa1.66□□□□□ -2.14
MACF1-232ENST00000567887 FRAS1Q86XX4 4008 aa1.64□□□□□ -2.15
MACF1-232ENST00000567887 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
MACF1-232ENST00000567887 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
MACF1-232ENST00000567887 RYR1P21817 5038 aa1.63□□□□□ -2.15
MACF1-232ENST00000567887 LYSTQ99698 3801 aa1.63□□□□□ -2.15
MACF1-232ENST00000567887 DNAH8Q96JB1 4490 aa1.63□□□□□ -2.15
MACF1-232ENST00000567887 DNAH6Q9C0G6 4158 aa1.62□□□□□ -2.15
MACF1-232ENST00000567887 KRTAP2-3P0C7H8 128 aa1.62□□□□□ -2.15
MACF1-232ENST00000567887 KRTAP2-4Q9BYR9 128 aa1.62□□□□□ -2.15
MACF1-232ENST00000567887 KRTAP2-1Q9BYU5 128 aa1.62□□□□□ -2.15
MACF1-232ENST00000567887 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
MACF1-232ENST00000567887 ANK3Q12955 4377 aaKnown RBP1.6□□□□□ -2.15
MACF1-232ENST00000567887 KRTAP9-7A8MTY7 169 aa1.58□□□□□ -2.16
MACF1-232ENST00000567887 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
MACF1-232ENST00000567887 MT1AP04731 61 aa1.57□□□□□ -2.16
MACF1-232ENST00000567887 KRTAP2-2Q9BYT5 123 aa1.56□□□□□ -2.16
MACF1-232ENST00000567887 DNAH9Q9NYC9 4486 aa1.56□□□□□ -2.16
MACF1-232ENST00000567887 KRTAP19-7Q3SYF9 63 aa1.55□□□□□ -2.16
MACF1-232ENST00000567887 DNAH5Q8TE73 4624 aa1.54□□□□□ -2.16
MACF1-232ENST00000567887 KRTAP9-4Q9BYQ2 154 aa1.54□□□□□ -2.16
MACF1-232ENST00000567887 KRTAP9-9Q9BYP9 154 aa1.52□□□□□ -2.17
MACF1-232ENST00000567887 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
MACF1-232ENST00000567887 SACSQ9NZJ4 4579 aa1.51□□□□□ -2.17
MACF1-232ENST00000567887 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
MACF1-232ENST00000567887 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
MACF1-232ENST00000567887 KMT2AQ03164 3969 aa1.5□□□□□ -2.17
MACF1-232ENST00000567887 KRTAP17-1Q9BYP8 105 aa1.5□□□□□ -2.17
MACF1-232ENST00000567887 KRTAP9-2Q9BYQ4 174 aa1.5□□□□□ -2.17
MACF1-232ENST00000567887 FAT2Q9NYQ8 4349 aa1.48□□□□□ -2.17
MACF1-232ENST00000567887 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms