RNA–Protein interactions for RNA: ENST00000567205.1

FANCA-222, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-222ENST00000567205 LCA10Q71F78 164 aa7.71□□□□□ -1.18
FANCA-222ENST00000567205 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
FANCA-222ENST00000567205 SMIM20Q8N5G0 67 aa7.7□□□□□ -1.18
FANCA-222ENST00000567205 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
FANCA-222ENST00000567205 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
FANCA-222ENST00000567205 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
FANCA-222ENST00000567205 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
FANCA-222ENST00000567205 KLKP1Q107X0 134 aa7.63□□□□□ -1.19
FANCA-222ENST00000567205 NDUFC1O43677 76 aa7.61□□□□□ -1.19
FANCA-222ENST00000567205 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.19
FANCA-222ENST00000567205 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
FANCA-222ENST00000567205 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
FANCA-222ENST00000567205 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
FANCA-222ENST00000567205 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
FANCA-222ENST00000567205 H0YAA0 97 aa7.48□□□□□ -1.21
FANCA-222ENST00000567205 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
FANCA-222ENST00000567205 SYNE2Q8WXH0 6885 aaKnown RBP7.42□□□□□ -1.22
FANCA-222ENST00000567205 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
FANCA-222ENST00000567205 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
FANCA-222ENST00000567205 ACYP2P14621 99 aa7.4□□□□□ -1.22
FANCA-222ENST00000567205 C20orf197Q8N268 126 aa7.36□□□□□ -1.23
FANCA-222ENST00000567205 Q5VV11 94 aa7.35□□□□□ -1.23
FANCA-222ENST00000567205 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
FANCA-222ENST00000567205 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
FANCA-222ENST00000567205 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
FANCA-222ENST00000567205 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
FANCA-222ENST00000567205 KRTAP6-3Q3LI67 103 aa7.32□□□□□ -1.24
FANCA-222ENST00000567205 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
FANCA-222ENST00000567205 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
FANCA-222ENST00000567205 MT1BP07438 61 aa7.23□□□□□ -1.25
FANCA-222ENST00000567205 COX7CP15954 63 aa7.23□□□□□ -1.25
FANCA-222ENST00000567205 R4GN34 69 aa7.21□□□□□ -1.26
FANCA-222ENST00000567205 A6NN06 94 aa7.16□□□□□ -1.26
FANCA-222ENST00000567205 P0C880 135 aa7.15□□□□□ -1.26
FANCA-222ENST00000567205 M0QZ58 72 aa7.12□□□□□ -1.27
FANCA-222ENST00000567205 ANAPC13Q9BS18 74 aa7.1□□□□□ -1.27
FANCA-222ENST00000567205 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
FANCA-222ENST00000567205 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
FANCA-222ENST00000567205 COA5Q86WW8 74 aa7.06□□□□□ -1.28
FANCA-222ENST00000567205 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
FANCA-222ENST00000567205 H7BZZ5 65 aa7.04□□□□□ -1.28
FANCA-222ENST00000567205 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
FANCA-222ENST00000567205 NEBP20929 6669 aa6.99□□□□□ -1.29
FANCA-222ENST00000567205 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
FANCA-222ENST00000567205 SEC61GP60059 68 aa6.95□□□□□ -1.3
FANCA-222ENST00000567205 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
FANCA-222ENST00000567205 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
FANCA-222ENST00000567205 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
FANCA-222ENST00000567205 ATP5EP56381 51 aaPredicted RBP6.9□□□□□ -1.3
FANCA-222ENST00000567205 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
FANCA-222ENST00000567205 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
FANCA-222ENST00000567205 MT1XP80297 61 aa6.85□□□□□ -1.31
FANCA-222ENST00000567205 KRTAP20-1Q3LI63 56 aa6.84□□□□□ -1.31
FANCA-222ENST00000567205 A0A1B0GU69 56 aa6.74□□□□□ -1.33
FANCA-222ENST00000567205 TMEM258P61165 79 aa6.74□□□□□ -1.33
FANCA-222ENST00000567205 KMT2DO14686 5537 aa6.73□□□□□ -1.33
FANCA-222ENST00000567205 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
FANCA-222ENST00000567205 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
FANCA-222ENST00000567205 A0A1B0GU33 70 aa6.72□□□□□ -1.33
FANCA-222ENST00000567205 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
FANCA-222ENST00000567205 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
FANCA-222ENST00000567205 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
FANCA-222ENST00000567205 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
FANCA-222ENST00000567205 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
FANCA-222ENST00000567205 A0A0D9SG42 100 aa6.61□□□□□ -1.35
FANCA-222ENST00000567205 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
FANCA-222ENST00000567205 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
FANCA-222ENST00000567205 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
FANCA-222ENST00000567205 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
FANCA-222ENST00000567205 SPRR2EP22531 72 aa6.56□□□□□ -1.36
FANCA-222ENST00000567205 SPRR2BP35325 72 aa6.56□□□□□ -1.36
FANCA-222ENST00000567205 SPRR2AP35326 72 aa6.56□□□□□ -1.36
FANCA-222ENST00000567205 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
FANCA-222ENST00000567205 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
FANCA-222ENST00000567205 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
FANCA-222ENST00000567205 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
FANCA-222ENST00000567205 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
FANCA-222ENST00000567205 LCE1AQ5T7P2 110 aa6.46□□□□□ -1.38
FANCA-222ENST00000567205 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
FANCA-222ENST00000567205 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
FANCA-222ENST00000567205 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
FANCA-222ENST00000567205 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
FANCA-222ENST00000567205 UQCR11O14957 56 aa6.4□□□□□ -1.38
FANCA-222ENST00000567205 V9GYY9 64 aa6.4□□□□□ -1.38
FANCA-222ENST00000567205 A8MU10 97 aa6.39□□□□□ -1.39
FANCA-222ENST00000567205 SPRR2DP22532 72 aa6.35□□□□□ -1.39
FANCA-222ENST00000567205 Q1T7F1 81 aa6.27□□□□□ -1.41
FANCA-222ENST00000567205 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
FANCA-222ENST00000567205 TNP1P09430 55 aa6.21□□□□□ -1.42
FANCA-222ENST00000567205 PCP4P48539 62 aa6.21□□□□□ -1.42
FANCA-222ENST00000567205 K7ERS5 55 aa6.2□□□□□ -1.42
FANCA-222ENST00000567205 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
FANCA-222ENST00000567205 PSPHP1O15172 72 aa6.19□□□□□ -1.42
FANCA-222ENST00000567205 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
FANCA-222ENST00000567205 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
FANCA-222ENST00000567205 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
FANCA-222ENST00000567205 A6NED7 52 aa6.06□□□□□ -1.44
FANCA-222ENST00000567205 MT1EP04732 61 aa6.06□□□□□ -1.44
FANCA-222ENST00000567205 KRTAP19-5Q3LI72 72 aa6.02□□□□□ -1.45
FANCA-222ENST00000567205 LCE3AQ5TA76 89 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms