RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 COA5Q86WW8 74 aa9.56□□□□□ -0.88
SPSB3-204ENST00000563741 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
SPSB3-204ENST00000563741 RPS28P62857 69 aaKnown RBP9.52□□□□□ -0.89
SPSB3-204ENST00000563741 KRTAP9-2Q9BYQ4 174 aa9.5□□□□□ -0.89
SPSB3-204ENST00000563741 S4R3F8 94 aa9.5□□□□□ -0.89
SPSB3-204ENST00000563741 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
SPSB3-204ENST00000563741 LCA10Q71F78 164 aa9.48□□□□□ -0.89
SPSB3-204ENST00000563741 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
SPSB3-204ENST00000563741 M0R2T5 61 aa9.45□□□□□ -0.9
SPSB3-204ENST00000563741 KRTAP3-3Q9BYR6 98 aa9.44□□□□□ -0.9
SPSB3-204ENST00000563741 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
SPSB3-204ENST00000563741 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SPSB3-204ENST00000563741 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.92
SPSB3-204ENST00000563741 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
SPSB3-204ENST00000563741 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
SPSB3-204ENST00000563741 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
SPSB3-204ENST00000563741 KRTAP9-6A0A140TA67 174 aa9.12□□□□□ -0.95
SPSB3-204ENST00000563741 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
SPSB3-204ENST00000563741 LINC01558Q9Y6Z2 57 aa9.11□□□□□ -0.95
SPSB3-204ENST00000563741 Q1T7F1 81 aa9.09□□□□□ -0.95
SPSB3-204ENST00000563741 H0YAA0 97 aa9.08□□□□□ -0.96
SPSB3-204ENST00000563741 V9GYY9 64 aa9.05□□□□□ -0.96
SPSB3-204ENST00000563741 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
SPSB3-204ENST00000563741 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
SPSB3-204ENST00000563741 A0A1B0GU69 56 aa9.02□□□□□ -0.96
SPSB3-204ENST00000563741 SEC61GP60059 68 aa9.01□□□□□ -0.97
SPSB3-204ENST00000563741 CRCT1Q9UGL9 99 aa9.01□□□□□ -0.97
SPSB3-204ENST00000563741 MT2AP02795 61 aa9□□□□□ -0.97
SPSB3-204ENST00000563741 P0C880 135 aa8.99□□□□□ -0.97
SPSB3-204ENST00000563741 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
SPSB3-204ENST00000563741 SVIPQ8NHG7 77 aa8.97□□□□□ -0.97
SPSB3-204ENST00000563741 PSPHP1O15172 72 aa8.96□□□□□ -0.98
SPSB3-204ENST00000563741 MT1FP04733 61 aa8.92□□□□□ -0.98
SPSB3-204ENST00000563741 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
SPSB3-204ENST00000563741 Q5VV11 94 aa8.88□□□□□ -0.99
SPSB3-204ENST00000563741 FSIP2Q5CZC0 6907 aa8.88□□□□□ -0.99
SPSB3-204ENST00000563741 A0A1B0GU33 70 aa8.82□□□□□ -1
SPSB3-204ENST00000563741 KRTAP9-3Q9BYQ3 159 aa8.82□□□□□ -1
SPSB3-204ENST00000563741 KRTAP13-4Q3LI77 160 aa8.75□□□□□ -1.01
SPSB3-204ENST00000563741 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
SPSB3-204ENST00000563741 R4GN34 69 aa8.74□□□□□ -1.01
SPSB3-204ENST00000563741 LCE2BO14633 110 aa8.73□□□□□ -1.01
SPSB3-204ENST00000563741 M0QZ58 72 aa8.72□□□□□ -1.01
SPSB3-204ENST00000563741 UQCR11O14957 56 aa8.71□□□□□ -1.01
SPSB3-204ENST00000563741 SPATA8Q6RVD6 105 aa8.71□□□□□ -1.02
SPSB3-204ENST00000563741 A6NED7 52 aa8.67□□□□□ -1.02
SPSB3-204ENST00000563741 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
SPSB3-204ENST00000563741 SPRR2GQ9BYE4 73 aa8.66□□□□□ -1.02
SPSB3-204ENST00000563741 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
SPSB3-204ENST00000563741 USH2AO75445 5202 aa8.63□□□□□ -1.03
SPSB3-204ENST00000563741 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
SPSB3-204ENST00000563741 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
SPSB3-204ENST00000563741 A8MU10 97 aa8.56□□□□□ -1.04
SPSB3-204ENST00000563741 A0A0D9SG42 100 aa8.54□□□□□ -1.04
SPSB3-204ENST00000563741 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
SPSB3-204ENST00000563741 SSPOA2VEC9 5147 aa8.5□□□□□ -1.05
SPSB3-204ENST00000563741 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
SPSB3-204ENST00000563741 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
SPSB3-204ENST00000563741 KRTAP19-6Q3LI70 58 aa8.42□□□□□ -1.06
SPSB3-204ENST00000563741 A6NN06 94 aa8.41□□□□□ -1.06
SPSB3-204ENST00000563741 KRTAP12-1P59990 96 aa8.39□□□□□ -1.07
SPSB3-204ENST00000563741 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
SPSB3-204ENST00000563741 MT1BP07438 61 aa8.37□□□□□ -1.07
SPSB3-204ENST00000563741 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
SPSB3-204ENST00000563741 FCGBPQ9Y6R7 5405 aaPredicted RBP8.34□□□□□ -1.07
SPSB3-204ENST00000563741 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
SPSB3-204ENST00000563741 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
SPSB3-204ENST00000563741 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
SPSB3-204ENST00000563741 K7ERS5 55 aa8.22□□□□□ -1.09
SPSB3-204ENST00000563741 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
SPSB3-204ENST00000563741 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
SPSB3-204ENST00000563741 MT1XP80297 61 aa8.06□□□□□ -1.12
SPSB3-204ENST00000563741 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
SPSB3-204ENST00000563741 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
SPSB3-204ENST00000563741 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
SPSB3-204ENST00000563741 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
SPSB3-204ENST00000563741 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
SPSB3-204ENST00000563741 ROMO1P60602 79 aa7.87□□□□□ -1.15
SPSB3-204ENST00000563741 SYNE2Q8WXH0 6885 aaKnown RBP7.87□□□□□ -1.15
SPSB3-204ENST00000563741 KTN1-AS1Q86SY8 53 aa7.83□□□□□ -1.16
SPSB3-204ENST00000563741 TNP1P09430 55 aa7.72□□□□□ -1.17
SPSB3-204ENST00000563741 KRTAP10-7P60409 375 aaPredicted RBP7.72□□□□□ -1.17
SPSB3-204ENST00000563741 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
SPSB3-204ENST00000563741 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
SPSB3-204ENST00000563741 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
SPSB3-204ENST00000563741 KRTAP5-9P26371 169 aa7.59□□□□□ -1.19
SPSB3-204ENST00000563741 KMT2DO14686 5537 aa7.52□□□□□ -1.21
SPSB3-204ENST00000563741 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
SPSB3-204ENST00000563741 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
SPSB3-204ENST00000563741 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
SPSB3-204ENST00000563741 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
SPSB3-204ENST00000563741 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
SPSB3-204ENST00000563741 NEBP20929 6669 aa7.41□□□□□ -1.22
SPSB3-204ENST00000563741 SPRR2FQ96RM1 72 aa7.41□□□□□ -1.22
SPSB3-204ENST00000563741 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
SPSB3-204ENST00000563741 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
SPSB3-204ENST00000563741 SPRR2EP22531 72 aa7.27□□□□□ -1.25
SPSB3-204ENST00000563741 SPRR2BP35325 72 aa7.27□□□□□ -1.25
SPSB3-204ENST00000563741 SPRR2AP35326 72 aa7.27□□□□□ -1.25
SPSB3-204ENST00000563741 KRTAP20-1Q3LI63 56 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms