RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
CCNDBP1-204ENST00000563065 USH2AO75445 5202 aa8.14□□□□□ -1.11
CCNDBP1-204ENST00000563065 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
CCNDBP1-204ENST00000563065 LCE2BO14633 110 aa8.13□□□□□ -1.11
CCNDBP1-204ENST00000563065 A8MUN3 132 aa8.1□□□□□ -1.11
CCNDBP1-204ENST00000563065 SERP2Q8N6R1 65 aa8.07□□□□□ -1.12
CCNDBP1-204ENST00000563065 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
CCNDBP1-204ENST00000563065 NDUFC1O43677 76 aa8.04□□□□□ -1.12
CCNDBP1-204ENST00000563065 DMAC1Q96GE9 116 aa8.02□□□□□ -1.13
CCNDBP1-204ENST00000563065 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
CCNDBP1-204ENST00000563065 ANAPC13Q9BS18 74 aa8.01□□□□□ -1.13
CCNDBP1-204ENST00000563065 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
CCNDBP1-204ENST00000563065 COX7CP15954 63 aa7.98□□□□□ -1.13
CCNDBP1-204ENST00000563065 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
CCNDBP1-204ENST00000563065 ACYP2P14621 99 aa7.88□□□□□ -1.15
CCNDBP1-204ENST00000563065 H0YAA0 97 aa7.86□□□□□ -1.15
CCNDBP1-204ENST00000563065 PCP4P48539 62 aa7.86□□□□□ -1.15
CCNDBP1-204ENST00000563065 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
CCNDBP1-204ENST00000563065 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
CCNDBP1-204ENST00000563065 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
CCNDBP1-204ENST00000563065 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
CCNDBP1-204ENST00000563065 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
CCNDBP1-204ENST00000563065 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.17
CCNDBP1-204ENST00000563065 CRIPTQ9P021 101 aa7.75□□□□□ -1.17
CCNDBP1-204ENST00000563065 MT1BP07438 61 aa7.75□□□□□ -1.17
CCNDBP1-204ENST00000563065 P0C880 135 aa7.75□□□□□ -1.17
CCNDBP1-204ENST00000563065 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
CCNDBP1-204ENST00000563065 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
CCNDBP1-204ENST00000563065 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
CCNDBP1-204ENST00000563065 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
CCNDBP1-204ENST00000563065 H7BZZ5 65 aa7.71□□□□□ -1.18
CCNDBP1-204ENST00000563065 Q5VV11 94 aa7.71□□□□□ -1.18
CCNDBP1-204ENST00000563065 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
CCNDBP1-204ENST00000563065 COA5Q86WW8 74 aa7.62□□□□□ -1.19
CCNDBP1-204ENST00000563065 R4GN34 69 aa7.6□□□□□ -1.19
CCNDBP1-204ENST00000563065 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
CCNDBP1-204ENST00000563065 M0QZ58 72 aa7.57□□□□□ -1.2
CCNDBP1-204ENST00000563065 TMEM258P61165 79 aa7.54□□□□□ -1.2
CCNDBP1-204ENST00000563065 ATP5EP56381 51 aaPredicted RBP7.53□□□□□ -1.2
CCNDBP1-204ENST00000563065 A6NN06 94 aa7.5□□□□□ -1.21
CCNDBP1-204ENST00000563065 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
CCNDBP1-204ENST00000563065 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
CCNDBP1-204ENST00000563065 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
CCNDBP1-204ENST00000563065 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
CCNDBP1-204ENST00000563065 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
CCNDBP1-204ENST00000563065 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
CCNDBP1-204ENST00000563065 MT1XP80297 61 aa7.34□□□□□ -1.23
CCNDBP1-204ENST00000563065 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
CCNDBP1-204ENST00000563065 SEC61GP60059 68 aa7.32□□□□□ -1.24
CCNDBP1-204ENST00000563065 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
CCNDBP1-204ENST00000563065 RPS28P62857 69 aaKnown RBP7.26□□□□□ -1.25
CCNDBP1-204ENST00000563065 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
CCNDBP1-204ENST00000563065 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
CCNDBP1-204ENST00000563065 A0A1B0GU33 70 aa7.22□□□□□ -1.25
CCNDBP1-204ENST00000563065 A0A1B0GU69 56 aa7.21□□□□□ -1.26
CCNDBP1-204ENST00000563065 A0A0D9SG42 100 aa7.17□□□□□ -1.26
CCNDBP1-204ENST00000563065 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.27
CCNDBP1-204ENST00000563065 KMT2DO14686 5537 aa7.11□□□□□ -1.27
CCNDBP1-204ENST00000563065 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
CCNDBP1-204ENST00000563065 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
CCNDBP1-204ENST00000563065 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
CCNDBP1-204ENST00000563065 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
CCNDBP1-204ENST00000563065 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
CCNDBP1-204ENST00000563065 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
CCNDBP1-204ENST00000563065 SPINT4Q6UDR6 99 aa7.03□□□□□ -1.28
CCNDBP1-204ENST00000563065 V9GYY9 64 aa7.03□□□□□ -1.28
CCNDBP1-204ENST00000563065 A8MU10 97 aa7.02□□□□□ -1.29
CCNDBP1-204ENST00000563065 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
CCNDBP1-204ENST00000563065 Q1T7F1 81 aa6.99□□□□□ -1.29
CCNDBP1-204ENST00000563065 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
CCNDBP1-204ENST00000563065 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
CCNDBP1-204ENST00000563065 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.29
CCNDBP1-204ENST00000563065 KRTAP5-9P26371 169 aa6.95□□□□□ -1.3
CCNDBP1-204ENST00000563065 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
CCNDBP1-204ENST00000563065 PSPHP1O15172 72 aa6.93□□□□□ -1.3
CCNDBP1-204ENST00000563065 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
CCNDBP1-204ENST00000563065 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
CCNDBP1-204ENST00000563065 UQCR11O14957 56 aa6.84□□□□□ -1.31
CCNDBP1-204ENST00000563065 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
CCNDBP1-204ENST00000563065 NEBP20929 6669 aa6.81□□□□□ -1.32
CCNDBP1-204ENST00000563065 A6NED7 52 aa6.74□□□□□ -1.33
CCNDBP1-204ENST00000563065 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
CCNDBP1-204ENST00000563065 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
CCNDBP1-204ENST00000563065 SPRR2EP22531 72 aa6.67□□□□□ -1.34
CCNDBP1-204ENST00000563065 SPRR2BP35325 72 aa6.67□□□□□ -1.34
CCNDBP1-204ENST00000563065 SPRR2AP35326 72 aa6.67□□□□□ -1.34
CCNDBP1-204ENST00000563065 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
CCNDBP1-204ENST00000563065 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
CCNDBP1-204ENST00000563065 TNP1P09430 55 aa6.54□□□□□ -1.36
CCNDBP1-204ENST00000563065 K7ERS5 55 aa6.53□□□□□ -1.36
CCNDBP1-204ENST00000563065 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
CCNDBP1-204ENST00000563065 KRTAP20-1Q3LI63 56 aa6.48□□□□□ -1.37
CCNDBP1-204ENST00000563065 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
CCNDBP1-204ENST00000563065 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
CCNDBP1-204ENST00000563065 MT1EP04732 61 aa6.47□□□□□ -1.37
CCNDBP1-204ENST00000563065 SPRR2DP22532 72 aa6.44□□□□□ -1.38
CCNDBP1-204ENST00000563065 BRK1Q8WUW1 75 aa6.41□□□□□ -1.38
CCNDBP1-204ENST00000563065 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.39
CCNDBP1-204ENST00000563065 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.39
CCNDBP1-204ENST00000563065 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms