RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 MT1HP80294 61 aa6.25□□□□□ -1.41
CMTM4-203ENST00000561680 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
CMTM4-203ENST00000561680 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
CMTM4-203ENST00000561680 S4R3F8 94 aa6.19□□□□□ -1.42
CMTM4-203ENST00000561680 ACYP2P14621 99 aa6.15□□□□□ -1.42
CMTM4-203ENST00000561680 LCA10Q71F78 164 aa6.15□□□□□ -1.42
CMTM4-203ENST00000561680 M0R2T5 61 aa6.13□□□□□ -1.43
CMTM4-203ENST00000561680 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
CMTM4-203ENST00000561680 TMEM258P61165 79 aa6.1□□□□□ -1.43
CMTM4-203ENST00000561680 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
CMTM4-203ENST00000561680 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
CMTM4-203ENST00000561680 COA5Q86WW8 74 aa6.05□□□□□ -1.44
CMTM4-203ENST00000561680 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
CMTM4-203ENST00000561680 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
CMTM4-203ENST00000561680 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
CMTM4-203ENST00000561680 H3BS24 57 aa6.01□□□□□ -1.45
CMTM4-203ENST00000561680 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
CMTM4-203ENST00000561680 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
CMTM4-203ENST00000561680 MT2AP02795 61 aa5.94□□□□□ -1.46
CMTM4-203ENST00000561680 H0YAA0 97 aa5.93□□□□□ -1.46
CMTM4-203ENST00000561680 MT1FP04733 61 aa5.9□□□□□ -1.46
CMTM4-203ENST00000561680 SERP1Q9Y6X1 66 aa5.9□□□□□ -1.46
CMTM4-203ENST00000561680 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
CMTM4-203ENST00000561680 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
CMTM4-203ENST00000561680 P0C880 135 aa5.8□□□□□ -1.48
CMTM4-203ENST00000561680 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
CMTM4-203ENST00000561680 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
CMTM4-203ENST00000561680 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
CMTM4-203ENST00000561680 SEC61GP60059 68 aa5.74□□□□□ -1.49
CMTM4-203ENST00000561680 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
CMTM4-203ENST00000561680 A0A1B0GU69 56 aa5.71□□□□□ -1.5
CMTM4-203ENST00000561680 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
CMTM4-203ENST00000561680 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
CMTM4-203ENST00000561680 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
CMTM4-203ENST00000561680 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
CMTM4-203ENST00000561680 R4GN34 69 aa5.67□□□□□ -1.5
CMTM4-203ENST00000561680 Q1T7F1 81 aa5.66□□□□□ -1.5
CMTM4-203ENST00000561680 V9GYY9 64 aa5.66□□□□□ -1.5
CMTM4-203ENST00000561680 M0QZ58 72 aa5.65□□□□□ -1.5
CMTM4-203ENST00000561680 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
CMTM4-203ENST00000561680 A0A1B0GU33 70 aa5.61□□□□□ -1.51
CMTM4-203ENST00000561680 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
CMTM4-203ENST00000561680 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
CMTM4-203ENST00000561680 Q5VV11 94 aa5.58□□□□□ -1.52
CMTM4-203ENST00000561680 PSPHP1O15172 72 aa5.56□□□□□ -1.52
CMTM4-203ENST00000561680 MT1BP07438 61 aa5.54□□□□□ -1.52
CMTM4-203ENST00000561680 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
CMTM4-203ENST00000561680 USH2AO75445 5202 aa5.54□□□□□ -1.52
CMTM4-203ENST00000561680 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
CMTM4-203ENST00000561680 UQCR11O14957 56 aa5.49□□□□□ -1.53
CMTM4-203ENST00000561680 A6NN06 94 aa5.47□□□□□ -1.53
CMTM4-203ENST00000561680 A0A0D9SG42 100 aa5.45□□□□□ -1.54
CMTM4-203ENST00000561680 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
CMTM4-203ENST00000561680 A8MU10 97 aa5.42□□□□□ -1.54
CMTM4-203ENST00000561680 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
CMTM4-203ENST00000561680 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
CMTM4-203ENST00000561680 SSPOA2VEC9 5147 aa5.4□□□□□ -1.54
CMTM4-203ENST00000561680 A6NED7 52 aa5.4□□□□□ -1.54
CMTM4-203ENST00000561680 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
CMTM4-203ENST00000561680 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
CMTM4-203ENST00000561680 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
CMTM4-203ENST00000561680 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
CMTM4-203ENST00000561680 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
CMTM4-203ENST00000561680 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
CMTM4-203ENST00000561680 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.55
CMTM4-203ENST00000561680 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
CMTM4-203ENST00000561680 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
CMTM4-203ENST00000561680 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
CMTM4-203ENST00000561680 MT1XP80297 61 aa5.3□□□□□ -1.56
CMTM4-203ENST00000561680 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
CMTM4-203ENST00000561680 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
CMTM4-203ENST00000561680 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
CMTM4-203ENST00000561680 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
CMTM4-203ENST00000561680 K7ERS5 55 aa5.2□□□□□ -1.58
CMTM4-203ENST00000561680 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
CMTM4-203ENST00000561680 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
CMTM4-203ENST00000561680 BRK1Q8WUW1 75 aa5.13□□□□□ -1.59
CMTM4-203ENST00000561680 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
CMTM4-203ENST00000561680 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
CMTM4-203ENST00000561680 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CMTM4-203ENST00000561680 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
CMTM4-203ENST00000561680 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
CMTM4-203ENST00000561680 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
CMTM4-203ENST00000561680 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
CMTM4-203ENST00000561680 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
CMTM4-203ENST00000561680 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
CMTM4-203ENST00000561680 TNP1P09430 55 aa4.98□□□□□ -1.61
CMTM4-203ENST00000561680 ROMO1P60602 79 aa4.95□□□□□ -1.62
CMTM4-203ENST00000561680 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
CMTM4-203ENST00000561680 KMT2DO14686 5537 aa4.92□□□□□ -1.62
CMTM4-203ENST00000561680 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
CMTM4-203ENST00000561680 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
CMTM4-203ENST00000561680 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
CMTM4-203ENST00000561680 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
CMTM4-203ENST00000561680 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
CMTM4-203ENST00000561680 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
CMTM4-203ENST00000561680 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
CMTM4-203ENST00000561680 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
CMTM4-203ENST00000561680 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
CMTM4-203ENST00000561680 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms