RNA–Protein interactions for RNA: ENST00000561156.1

TNFAIP2-210, Transcript of TNF alpha induced protein 2, humanhuman

TSL 4

Gene TNFAIP2, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-210ENST00000561156 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.55
TNFAIP2-210ENST00000561156 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.55
TNFAIP2-210ENST00000561156 ATOX1O00244 68 aa5.34□□□□□ -1.55
TNFAIP2-210ENST00000561156 A0A087WVE0 104 aa5.33□□□□□ -1.56
TNFAIP2-210ENST00000561156 H0Y9P7 68 aa5.33□□□□□ -1.56
TNFAIP2-210ENST00000561156 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
TNFAIP2-210ENST00000561156 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
TNFAIP2-210ENST00000561156 CCDC179H3BU77 68 aa5.29□□□□□ -1.56
TNFAIP2-210ENST00000561156 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
TNFAIP2-210ENST00000561156 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
TNFAIP2-210ENST00000561156 OCR1Q9BZK8 76 aa5.26□□□□□ -1.57
TNFAIP2-210ENST00000561156 KLKP1Q107X0 134 aa5.25□□□□□ -1.57
TNFAIP2-210ENST00000561156 A8MUN3 132 aa5.23□□□□□ -1.57
TNFAIP2-210ENST00000561156 COX7CP15954 63 aa5.23□□□□□ -1.57
TNFAIP2-210ENST00000561156 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
TNFAIP2-210ENST00000561156 MT1BP07438 61 aa5.22□□□□□ -1.57
TNFAIP2-210ENST00000561156 MP68P56378 58 aa5.22□□□□□ -1.57
TNFAIP2-210ENST00000561156 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
TNFAIP2-210ENST00000561156 Q5VV11 94 aa5.21□□□□□ -1.58
TNFAIP2-210ENST00000561156 NDUFC1O43677 76 aa5.2□□□□□ -1.58
TNFAIP2-210ENST00000561156 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
TNFAIP2-210ENST00000561156 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
TNFAIP2-210ENST00000561156 H0YAA0 97 aa5.18□□□□□ -1.58
TNFAIP2-210ENST00000561156 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
TNFAIP2-210ENST00000561156 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
TNFAIP2-210ENST00000561156 H3BPC8 53 aa5.17□□□□□ -1.58
TNFAIP2-210ENST00000561156 TMEM258P61165 79 aa5.14□□□□□ -1.59
TNFAIP2-210ENST00000561156 A6NN06 94 aa5.13□□□□□ -1.59
TNFAIP2-210ENST00000561156 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
TNFAIP2-210ENST00000561156 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
TNFAIP2-210ENST00000561156 DMAC1Q96GE9 116 aa5.09□□□□□ -1.59
TNFAIP2-210ENST00000561156 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
TNFAIP2-210ENST00000561156 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
TNFAIP2-210ENST00000561156 C20orf197Q8N268 126 aa5□□□□□ -1.61
TNFAIP2-210ENST00000561156 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
TNFAIP2-210ENST00000561156 CYSTM1Q9H1C7 97 aa4.99□□□□□ -1.61
TNFAIP2-210ENST00000561156 SERP1Q9Y6X1 66 aa4.99□□□□□ -1.61
TNFAIP2-210ENST00000561156 P0C880 135 aa4.98□□□□□ -1.61
TNFAIP2-210ENST00000561156 R4GN34 69 aa4.97□□□□□ -1.61
TNFAIP2-210ENST00000561156 H7BZZ5 65 aa4.96□□□□□ -1.62
TNFAIP2-210ENST00000561156 ACYP2P14621 99 aa4.95□□□□□ -1.62
TNFAIP2-210ENST00000561156 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
TNFAIP2-210ENST00000561156 NEBP20929 6669 aa4.94□□□□□ -1.62
TNFAIP2-210ENST00000561156 SMIM26A0A096LP01 95 aa4.93□□□□□ -1.62
TNFAIP2-210ENST00000561156 M0QZ58 72 aa4.93□□□□□ -1.62
TNFAIP2-210ENST00000561156 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
TNFAIP2-210ENST00000561156 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
TNFAIP2-210ENST00000561156 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
TNFAIP2-210ENST00000561156 MT1XP80297 61 aa4.9□□□□□ -1.63
TNFAIP2-210ENST00000561156 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
TNFAIP2-210ENST00000561156 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
TNFAIP2-210ENST00000561156 SNURFQ9Y675 71 aa4.89□□□□□ -1.63
TNFAIP2-210ENST00000561156 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
TNFAIP2-210ENST00000561156 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
TNFAIP2-210ENST00000561156 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
TNFAIP2-210ENST00000561156 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
TNFAIP2-210ENST00000561156 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
TNFAIP2-210ENST00000561156 KMT2DO14686 5537 aa4.8□□□□□ -1.64
TNFAIP2-210ENST00000561156 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
TNFAIP2-210ENST00000561156 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
TNFAIP2-210ENST00000561156 Q1T7F1 81 aa4.73□□□□□ -1.65
TNFAIP2-210ENST00000561156 V9GYY9 64 aa4.73□□□□□ -1.65
TNFAIP2-210ENST00000561156 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
TNFAIP2-210ENST00000561156 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
TNFAIP2-210ENST00000561156 COA5Q86WW8 74 aa4.71□□□□□ -1.66
TNFAIP2-210ENST00000561156 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
TNFAIP2-210ENST00000561156 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
TNFAIP2-210ENST00000561156 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
TNFAIP2-210ENST00000561156 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
TNFAIP2-210ENST00000561156 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
TNFAIP2-210ENST00000561156 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
TNFAIP2-210ENST00000561156 SPRR2EP22531 72 aa4.65□□□□□ -1.67
TNFAIP2-210ENST00000561156 SPRR2BP35325 72 aa4.65□□□□□ -1.67
TNFAIP2-210ENST00000561156 SPRR2AP35326 72 aa4.65□□□□□ -1.67
TNFAIP2-210ENST00000561156 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
TNFAIP2-210ENST00000561156 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
TNFAIP2-210ENST00000561156 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
TNFAIP2-210ENST00000561156 SEC61GP60059 68 aa4.59□□□□□ -1.67
TNFAIP2-210ENST00000561156 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
TNFAIP2-210ENST00000561156 PSPHP1O15172 72 aa4.55□□□□□ -1.68
TNFAIP2-210ENST00000561156 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
TNFAIP2-210ENST00000561156 A0A0D9SG42 100 aa4.51□□□□□ -1.69
TNFAIP2-210ENST00000561156 A0A1B0GU33 70 aa4.51□□□□□ -1.69
TNFAIP2-210ENST00000561156 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
TNFAIP2-210ENST00000561156 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
TNFAIP2-210ENST00000561156 SPRR2DP22532 72 aa4.5□□□□□ -1.69
TNFAIP2-210ENST00000561156 PRR15LQ9BU68 103 aa4.5□□□□□ -1.69
TNFAIP2-210ENST00000561156 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
TNFAIP2-210ENST00000561156 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
TNFAIP2-210ENST00000561156 A0A1B0GU69 56 aa4.46□□□□□ -1.7
TNFAIP2-210ENST00000561156 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
TNFAIP2-210ENST00000561156 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
TNFAIP2-210ENST00000561156 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
TNFAIP2-210ENST00000561156 A6NED7 52 aa4.44□□□□□ -1.7
TNFAIP2-210ENST00000561156 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
TNFAIP2-210ENST00000561156 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
TNFAIP2-210ENST00000561156 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
TNFAIP2-210ENST00000561156 A8MU10 97 aa4.35□□□□□ -1.71
TNFAIP2-210ENST00000561156 MT1EP04732 61 aa4.34□□□□□ -1.71
TNFAIP2-210ENST00000561156 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms