RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
PBX1-219ENST00000560641 XP32Q5T750 250 aa8.14□□□□□ -1.11
PBX1-219ENST00000560641 A0A0D9SG42 100 aa8.12□□□□□ -1.11
PBX1-219ENST00000560641 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
PBX1-219ENST00000560641 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
PBX1-219ENST00000560641 HYDINQ4G0P3 5121 aa8.08□□□□□ -1.12
PBX1-219ENST00000560641 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
PBX1-219ENST00000560641 TNXBP22105 4242 aa8.06□□□□□ -1.12
PBX1-219ENST00000560641 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
PBX1-219ENST00000560641 HSPG2P98160 4391 aa7.98□□□□□ -1.13
PBX1-219ENST00000560641 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.13
PBX1-219ENST00000560641 M0QZ58 72 aa7.96□□□□□ -1.14
PBX1-219ENST00000560641 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
PBX1-219ENST00000560641 DYNC1H1Q14204 4646 aaKnown RBP7.89□□□□□ -1.15
PBX1-219ENST00000560641 FAT1Q14517 4588 aa7.88□□□□□ -1.15
PBX1-219ENST00000560641 SMR3BP02814 79 aaPredicted RBP7.81□□□□□ -1.16
PBX1-219ENST00000560641 A0A1B0GVY2 172 aa7.78□□□□□ -1.16
PBX1-219ENST00000560641 MYCBP2O75592 4640 aa7.77□□□□□ -1.17
PBX1-219ENST00000560641 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
PBX1-219ENST00000560641 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
PBX1-219ENST00000560641 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
PBX1-219ENST00000560641 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
PBX1-219ENST00000560641 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
PBX1-219ENST00000560641 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
PBX1-219ENST00000560641 R4GN34 69 aa7.47□□□□□ -1.21
PBX1-219ENST00000560641 LPAP08519 4548 aa7.37□□□□□ -1.23
PBX1-219ENST00000560641 KRTAP23-1A1A580 65 aa7.35□□□□□ -1.23
PBX1-219ENST00000560641 RYR2Q92736 4967 aa7.34□□□□□ -1.23
PBX1-219ENST00000560641 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
PBX1-219ENST00000560641 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
PBX1-219ENST00000560641 Q5VSD8 79 aa7.33□□□□□ -1.24
PBX1-219ENST00000560641 KMT2CQ8NEZ4 4911 aaKnown RBP7.29□□□□□ -1.24
PBX1-219ENST00000560641 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.24
PBX1-219ENST00000560641 LRP2P98164 4655 aa7.21□□□□□ -1.25
PBX1-219ENST00000560641 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
PBX1-219ENST00000560641 RYR1P21817 5038 aa7.17□□□□□ -1.26
PBX1-219ENST00000560641 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
PBX1-219ENST00000560641 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
PBX1-219ENST00000560641 KRTAP17-1Q9BYP8 105 aa7.08□□□□□ -1.28
PBX1-219ENST00000560641 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
PBX1-219ENST00000560641 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
PBX1-219ENST00000560641 TNP1P09430 55 aa7.03□□□□□ -1.28
PBX1-219ENST00000560641 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
PBX1-219ENST00000560641 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
PBX1-219ENST00000560641 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
PBX1-219ENST00000560641 HERC1Q15751 4861 aa6.88□□□□□ -1.31
PBX1-219ENST00000560641 RYR3Q15413 4870 aa6.85□□□□□ -1.31
PBX1-219ENST00000560641 INE1O15225 51 aa6.83□□□□□ -1.32
PBX1-219ENST00000560641 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
PBX1-219ENST00000560641 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
PBX1-219ENST00000560641 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
PBX1-219ENST00000560641 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
PBX1-219ENST00000560641 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
PBX1-219ENST00000560641 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
PBX1-219ENST00000560641 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.38
PBX1-219ENST00000560641 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
PBX1-219ENST00000560641 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
PBX1-219ENST00000560641 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
PBX1-219ENST00000560641 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
PBX1-219ENST00000560641 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
PBX1-219ENST00000560641 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
PBX1-219ENST00000560641 J3QL48 77 aa6.27□□□□□ -1.41
PBX1-219ENST00000560641 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
PBX1-219ENST00000560641 MUC2Q02817 5179 aa6.2□□□□□ -1.42
PBX1-219ENST00000560641 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
PBX1-219ENST00000560641 HERC2O95714 4834 aa6.17□□□□□ -1.42
PBX1-219ENST00000560641 MT1XP80297 61 aa6.16□□□□□ -1.42
PBX1-219ENST00000560641 MT2AP02795 61 aa6.11□□□□□ -1.43
PBX1-219ENST00000560641 MT1FP04733 61 aa6.11□□□□□ -1.43
PBX1-219ENST00000560641 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
PBX1-219ENST00000560641 MT1BP07438 61 aa6.08□□□□□ -1.44
PBX1-219ENST00000560641 MT1HP80294 61 aa6.07□□□□□ -1.44
PBX1-219ENST00000560641 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
PBX1-219ENST00000560641 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
PBX1-219ENST00000560641 UBR4Q5T4S7 5183 aa6□□□□□ -1.45
PBX1-219ENST00000560641 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
PBX1-219ENST00000560641 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
PBX1-219ENST00000560641 M0R2T5 61 aa5.92□□□□□ -1.46
PBX1-219ENST00000560641 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
PBX1-219ENST00000560641 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
PBX1-219ENST00000560641 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
PBX1-219ENST00000560641 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
PBX1-219ENST00000560641 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
PBX1-219ENST00000560641 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
PBX1-219ENST00000560641 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
PBX1-219ENST00000560641 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
PBX1-219ENST00000560641 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
PBX1-219ENST00000560641 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
PBX1-219ENST00000560641 LCE2BO14633 110 aa5.4□□□□□ -1.55
PBX1-219ENST00000560641 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
PBX1-219ENST00000560641 MT1LQ93083 61 aa5.37□□□□□ -1.55
PBX1-219ENST00000560641 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
PBX1-219ENST00000560641 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
PBX1-219ENST00000560641 MT1EP04732 61 aa5.3□□□□□ -1.56
PBX1-219ENST00000560641 KMT2DO14686 5537 aa5.22□□□□□ -1.57
PBX1-219ENST00000560641 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
PBX1-219ENST00000560641 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
PBX1-219ENST00000560641 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
PBX1-219ENST00000560641 USH2AO75445 5202 aa4.96□□□□□ -1.61
PBX1-219ENST00000560641 MT1AP04731 61 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms