RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
PDE8A-211ENST00000559742 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
PDE8A-211ENST00000559742 CRIPTQ9P021 101 aa10.07□□□□□ -0.8
PDE8A-211ENST00000559742 P0C880 135 aa10.06□□□□□ -0.8
PDE8A-211ENST00000559742 Q5VSD8 79 aa10.06□□□□□ -0.8
PDE8A-211ENST00000559742 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
PDE8A-211ENST00000559742 KIAA1109Q2LD37 5005 aa10.04□□□□□ -0.8
PDE8A-211ENST00000559742 RYR1P21817 5038 aa10.01□□□□□ -0.81
PDE8A-211ENST00000559742 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
PDE8A-211ENST00000559742 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
PDE8A-211ENST00000559742 K7ERS5 55 aa9.95□□□□□ -0.82
PDE8A-211ENST00000559742 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
PDE8A-211ENST00000559742 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
PDE8A-211ENST00000559742 COX6B2Q6YFQ2 88 aa9.86□□□□□ -0.83
PDE8A-211ENST00000559742 SPINT4Q6UDR6 99 aa9.76□□□□□ -0.85
PDE8A-211ENST00000559742 TPRXLQ17RH7 258 aa9.73□□□□□ -0.85
PDE8A-211ENST00000559742 LPAP08519 4548 aa9.73□□□□□ -0.85
PDE8A-211ENST00000559742 XP32Q5T750 250 aa9.72□□□□□ -0.85
PDE8A-211ENST00000559742 RPL37P61927 97 aaKnown RBP9.7□□□□□ -0.86
PDE8A-211ENST00000559742 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
PDE8A-211ENST00000559742 LRP2P98164 4655 aa9.67□□□□□ -0.86
PDE8A-211ENST00000559742 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
PDE8A-211ENST00000559742 NDUFAF8A1L188 74 aa9.62□□□□□ -0.87
PDE8A-211ENST00000559742 KRTAP15-1Q3LI76 137 aa9.62□□□□□ -0.87
PDE8A-211ENST00000559742 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
PDE8A-211ENST00000559742 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
PDE8A-211ENST00000559742 C10orf95Q9H7T3 257 aa9.6□□□□□ -0.87
PDE8A-211ENST00000559742 KRTAP10-6P60371 365 aaPredicted RBP9.59□□□□□ -0.87
PDE8A-211ENST00000559742 A0A0D9SG42 100 aa9.58□□□□□ -0.88
PDE8A-211ENST00000559742 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
PDE8A-211ENST00000559742 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.89
PDE8A-211ENST00000559742 S4R3F8 94 aa9.41□□□□□ -0.9
PDE8A-211ENST00000559742 BIRC6Q9NR09 4857 aa9.36□□□□□ -0.91
PDE8A-211ENST00000559742 HERC2O95714 4834 aa9.36□□□□□ -0.91
PDE8A-211ENST00000559742 KRTAP12-2P59991 146 aa9.34□□□□□ -0.91
PDE8A-211ENST00000559742 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
PDE8A-211ENST00000559742 A0A0A0MQY5 61 aa9.21□□□□□ -0.94
PDE8A-211ENST00000559742 J3QL48 77 aa9.2□□□□□ -0.94
PDE8A-211ENST00000559742 MUC2Q02817 5179 aa9.13□□□□□ -0.95
PDE8A-211ENST00000559742 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
PDE8A-211ENST00000559742 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
PDE8A-211ENST00000559742 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
PDE8A-211ENST00000559742 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
PDE8A-211ENST00000559742 HERC1Q15751 4861 aa9.01□□□□□ -0.97
PDE8A-211ENST00000559742 M0QZ58 72 aa8.96□□□□□ -0.97
PDE8A-211ENST00000559742 LUZP6Q538Z0 58 aa8.91□□□□□ -0.98
PDE8A-211ENST00000559742 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
PDE8A-211ENST00000559742 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
PDE8A-211ENST00000559742 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
PDE8A-211ENST00000559742 R4GN34 69 aa8.77□□□□□ -1.01
PDE8A-211ENST00000559742 KRTAP19-2Q3LHN2 52 aa8.74□□□□□ -1.01
PDE8A-211ENST00000559742 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
PDE8A-211ENST00000559742 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
PDE8A-211ENST00000559742 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
PDE8A-211ENST00000559742 UBR4Q5T4S7 5183 aa8.51□□□□□ -1.05
PDE8A-211ENST00000559742 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
PDE8A-211ENST00000559742 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
PDE8A-211ENST00000559742 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
PDE8A-211ENST00000559742 M0R2T5 61 aa8.26□□□□□ -1.09
PDE8A-211ENST00000559742 SPRR5A0A1B0GTR4 108 aa8.18□□□□□ -1.1
PDE8A-211ENST00000559742 MT1HP80294 61 aa8.15□□□□□ -1.11
PDE8A-211ENST00000559742 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
PDE8A-211ENST00000559742 TNP1P09430 55 aa8.03□□□□□ -1.12
PDE8A-211ENST00000559742 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
PDE8A-211ENST00000559742 KRTAP10-10P60014 251 aa8□□□□□ -1.13
PDE8A-211ENST00000559742 MT1FP04733 61 aa7.98□□□□□ -1.13
PDE8A-211ENST00000559742 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
PDE8A-211ENST00000559742 MT2AP02795 61 aa7.96□□□□□ -1.13
PDE8A-211ENST00000559742 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
PDE8A-211ENST00000559742 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
PDE8A-211ENST00000559742 INE1O15225 51 aa7.67□□□□□ -1.18
PDE8A-211ENST00000559742 MT1BP07438 61 aa7.63□□□□□ -1.19
PDE8A-211ENST00000559742 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
PDE8A-211ENST00000559742 USH2AO75445 5202 aa7.59□□□□□ -1.19
PDE8A-211ENST00000559742 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
PDE8A-211ENST00000559742 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
PDE8A-211ENST00000559742 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
PDE8A-211ENST00000559742 MT1XP80297 61 aa7.53□□□□□ -1.2
PDE8A-211ENST00000559742 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
PDE8A-211ENST00000559742 LCE2BO14633 110 aa7.37□□□□□ -1.23
PDE8A-211ENST00000559742 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
PDE8A-211ENST00000559742 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
PDE8A-211ENST00000559742 KMT2DO14686 5537 aa7.33□□□□□ -1.24
PDE8A-211ENST00000559742 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
PDE8A-211ENST00000559742 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
PDE8A-211ENST00000559742 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
PDE8A-211ENST00000559742 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
PDE8A-211ENST00000559742 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
PDE8A-211ENST00000559742 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
PDE8A-211ENST00000559742 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
PDE8A-211ENST00000559742 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
PDE8A-211ENST00000559742 KRTAP19-7Q3SYF9 63 aa6.71□□□□□ -1.34
PDE8A-211ENST00000559742 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
PDE8A-211ENST00000559742 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
PDE8A-211ENST00000559742 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
PDE8A-211ENST00000559742 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
PDE8A-211ENST00000559742 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.36
PDE8A-211ENST00000559742 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.36
PDE8A-211ENST00000559742 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.36
PDE8A-211ENST00000559742 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms