RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 FCGBPQ9Y6R7 5405 aaPredicted RBP8.66□□□□□ -1.02
CASC4-209ENST00000559222 SCGB1A1P11684 91 aa8.66□□□□□ -1.02
CASC4-209ENST00000559222 CSAG1Q6PB30 78 aa8.65□□□□□ -1.02
CASC4-209ENST00000559222 IMUPQ9GZP8 106 aa8.65□□□□□ -1.02
CASC4-209ENST00000559222 SYNE2Q8WXH0 6885 aaKnown RBP8.61□□□□□ -1.03
CASC4-209ENST00000559222 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
CASC4-209ENST00000559222 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
CASC4-209ENST00000559222 MACF1Q9UPN3 7388 aaKnown RBP8.61□□□□□ -1.03
CASC4-209ENST00000559222 H3BPC8 53 aa8.57□□□□□ -1.04
CASC4-209ENST00000559222 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
CASC4-209ENST00000559222 A8MUN3 132 aa8.52□□□□□ -1.05
CASC4-209ENST00000559222 TRAV7A0A075B6U4 112 aa8.5□□□□□ -1.05
CASC4-209ENST00000559222 NDUFC1O43677 76 aa8.46□□□□□ -1.06
CASC4-209ENST00000559222 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
CASC4-209ENST00000559222 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
CASC4-209ENST00000559222 KRTAP19-6Q3LI70 58 aa8.41□□□□□ -1.06
CASC4-209ENST00000559222 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
CASC4-209ENST00000559222 SNURFQ9Y675 71 aa8.38□□□□□ -1.07
CASC4-209ENST00000559222 MT1BP07438 61 aa8.36□□□□□ -1.07
CASC4-209ENST00000559222 H0YAA0 97 aa8.34□□□□□ -1.07
CASC4-209ENST00000559222 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
CASC4-209ENST00000559222 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
CASC4-209ENST00000559222 SERP2Q8N6R1 65 aa8.3□□□□□ -1.08
CASC4-209ENST00000559222 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
CASC4-209ENST00000559222 Q5VV11 94 aa8.27□□□□□ -1.09
CASC4-209ENST00000559222 CRIPTQ9P021 101 aa8.24□□□□□ -1.09
CASC4-209ENST00000559222 P0C880 135 aa8.22□□□□□ -1.09
CASC4-209ENST00000559222 ACYP2P14621 99 aa8.21□□□□□ -1.1
CASC4-209ENST00000559222 KRTAP6-3Q3LI67 103 aa8.15□□□□□ -1.1
CASC4-209ENST00000559222 NEBP20929 6669 aa8.15□□□□□ -1.1
CASC4-209ENST00000559222 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
CASC4-209ENST00000559222 COX7CP15954 63 aa8.12□□□□□ -1.11
CASC4-209ENST00000559222 CYSTM1Q9H1C7 97 aa8.11□□□□□ -1.11
CASC4-209ENST00000559222 A6NN06 94 aa8.08□□□□□ -1.12
CASC4-209ENST00000559222 CHKB-CPT1BH3BT56 60 aa8.08□□□□□ -1.12
CASC4-209ENST00000559222 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
CASC4-209ENST00000559222 M0QZ58 72 aa8.03□□□□□ -1.12
CASC4-209ENST00000559222 R4GN34 69 aa8.03□□□□□ -1.12
CASC4-209ENST00000559222 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
CASC4-209ENST00000559222 H7BZZ5 65 aa7.98□□□□□ -1.13
CASC4-209ENST00000559222 COA5Q86WW8 74 aa7.97□□□□□ -1.13
CASC4-209ENST00000559222 MUC12Q9UKN1 5478 aa7.96□□□□□ -1.14
CASC4-209ENST00000559222 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
CASC4-209ENST00000559222 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
CASC4-209ENST00000559222 MT1XP80297 61 aa7.89□□□□□ -1.15
CASC4-209ENST00000559222 KRTAP20-1Q3LI63 56 aa7.88□□□□□ -1.15
CASC4-209ENST00000559222 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
CASC4-209ENST00000559222 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
CASC4-209ENST00000559222 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
CASC4-209ENST00000559222 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
CASC4-209ENST00000559222 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
CASC4-209ENST00000559222 KMT2DO14686 5537 aa7.64□□□□□ -1.19
CASC4-209ENST00000559222 SERP1Q9Y6X1 66 aa7.61□□□□□ -1.19
CASC4-209ENST00000559222 SEC61GP60059 68 aa7.6□□□□□ -1.19
CASC4-209ENST00000559222 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
CASC4-209ENST00000559222 KRTAP5-9P26371 169 aa7.57□□□□□ -1.2
CASC4-209ENST00000559222 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
CASC4-209ENST00000559222 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
CASC4-209ENST00000559222 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
CASC4-209ENST00000559222 A0A0D9SG42 100 aa7.54□□□□□ -1.2
CASC4-209ENST00000559222 A0A1B0GU33 70 aa7.54□□□□□ -1.2
CASC4-209ENST00000559222 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
CASC4-209ENST00000559222 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
CASC4-209ENST00000559222 A0A1B0GU69 56 aa7.49□□□□□ -1.21
CASC4-209ENST00000559222 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
CASC4-209ENST00000559222 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
CASC4-209ENST00000559222 TMEM258P61165 79 aa7.47□□□□□ -1.21
CASC4-209ENST00000559222 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
CASC4-209ENST00000559222 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
CASC4-209ENST00000559222 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
CASC4-209ENST00000559222 SPRR2FQ96RM1 72 aa7.41□□□□□ -1.22
CASC4-209ENST00000559222 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
CASC4-209ENST00000559222 A8MU10 97 aa7.38□□□□□ -1.23
CASC4-209ENST00000559222 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
CASC4-209ENST00000559222 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
CASC4-209ENST00000559222 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
CASC4-209ENST00000559222 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
CASC4-209ENST00000559222 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
CASC4-209ENST00000559222 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
CASC4-209ENST00000559222 SPRR2EP22531 72 aa7.26□□□□□ -1.25
CASC4-209ENST00000559222 SPRR2BP35325 72 aa7.26□□□□□ -1.25
CASC4-209ENST00000559222 SPRR2AP35326 72 aa7.26□□□□□ -1.25
CASC4-209ENST00000559222 LCE1AQ5T7P2 110 aa7.21□□□□□ -1.26
CASC4-209ENST00000559222 KRTAP2-2Q9BYT5 123 aa7.2□□□□□ -1.26
CASC4-209ENST00000559222 KRTAP2-1Q9BYU5 128 aa7.2□□□□□ -1.26
CASC4-209ENST00000559222 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.27
CASC4-209ENST00000559222 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
CASC4-209ENST00000559222 UQCR11O14957 56 aa7.07□□□□□ -1.28
CASC4-209ENST00000559222 KRTAP19-7Q3SYF9 63 aa7.05□□□□□ -1.28
CASC4-209ENST00000559222 PSPHP1O15172 72 aa7.02□□□□□ -1.29
CASC4-209ENST00000559222 SPRR2DP22532 72 aa7□□□□□ -1.29
CASC4-209ENST00000559222 PCP4P48539 62 aa7□□□□□ -1.29
CASC4-209ENST00000559222 Q1T7F1 81 aa6.99□□□□□ -1.29
CASC4-209ENST00000559222 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
CASC4-209ENST00000559222 MT1EP04732 61 aa6.96□□□□□ -1.3
CASC4-209ENST00000559222 V9GYY9 64 aa6.94□□□□□ -1.3
CASC4-209ENST00000559222 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
CASC4-209ENST00000559222 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
CASC4-209ENST00000559222 TNP1P09430 55 aa6.89□□□□□ -1.31
CASC4-209ENST00000559222 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms