RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 LCA10Q71F78 164 aa8.35□□□□□ -1.07
CDC42BPB-204ENST00000559043 MUC17Q685J3 4493 aa8.33□□□□□ -1.08
CDC42BPB-204ENST00000559043 KRTAP4-1Q9BYQ7 146 aa8.31□□□□□ -1.08
CDC42BPB-204ENST00000559043 CDC42SE1Q9NRR8 79 aa8.31□□□□□ -1.08
CDC42BPB-204ENST00000559043 SPINK7P58062 85 aa8.3□□□□□ -1.08
CDC42BPB-204ENST00000559043 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
CDC42BPB-204ENST00000559043 MUC2Q02817 5179 aa8.3□□□□□ -1.08
CDC42BPB-204ENST00000559043 RNF213Q63HN8 5207 aa8.29□□□□□ -1.08
CDC42BPB-204ENST00000559043 ATP11AUNQ6ZP68 121 aa8.27□□□□□ -1.09
CDC42BPB-204ENST00000559043 A0A1B0GU69 56 aa8.26□□□□□ -1.09
CDC42BPB-204ENST00000559043 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
CDC42BPB-204ENST00000559043 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
CDC42BPB-204ENST00000559043 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
CDC42BPB-204ENST00000559043 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
CDC42BPB-204ENST00000559043 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
CDC42BPB-204ENST00000559043 UQCR11O14957 56 aa8.1□□□□□ -1.11
CDC42BPB-204ENST00000559043 A6NN06 94 aa8.09□□□□□ -1.11
CDC42BPB-204ENST00000559043 SEC61GP60059 68 aa8.06□□□□□ -1.12
CDC42BPB-204ENST00000559043 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
CDC42BPB-204ENST00000559043 KRTAP19-2Q3LHN2 52 aa8.04□□□□□ -1.12
CDC42BPB-204ENST00000559043 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
CDC42BPB-204ENST00000559043 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
CDC42BPB-204ENST00000559043 FAT4Q6V0I7 4981 aa7.96□□□□□ -1.14
CDC42BPB-204ENST00000559043 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
CDC42BPB-204ENST00000559043 A0A1B0GU33 70 aa7.88□□□□□ -1.15
CDC42BPB-204ENST00000559043 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
CDC42BPB-204ENST00000559043 H0YAA0 97 aa7.87□□□□□ -1.15
CDC42BPB-204ENST00000559043 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
CDC42BPB-204ENST00000559043 S4R3F8 94 aa7.84□□□□□ -1.15
CDC42BPB-204ENST00000559043 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPB-204ENST00000559043 MT1HP80294 61 aa7.8□□□□□ -1.16
CDC42BPB-204ENST00000559043 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPB-204ENST00000559043 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPB-204ENST00000559043 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
CDC42BPB-204ENST00000559043 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.18
CDC42BPB-204ENST00000559043 M0R2T5 61 aa7.62□□□□□ -1.19
CDC42BPB-204ENST00000559043 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
CDC42BPB-204ENST00000559043 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
CDC42BPB-204ENST00000559043 P0C880 135 aa7.6□□□□□ -1.19
CDC42BPB-204ENST00000559043 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
CDC42BPB-204ENST00000559043 K7ERS5 55 aa7.55□□□□□ -1.2
CDC42BPB-204ENST00000559043 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPB-204ENST00000559043 KRTAP9-8Q9BYQ0 159 aa7.49□□□□□ -1.21
CDC42BPB-204ENST00000559043 A0A0D9SG42 100 aa7.47□□□□□ -1.21
CDC42BPB-204ENST00000559043 M0QZ58 72 aa7.42□□□□□ -1.22
CDC42BPB-204ENST00000559043 MT2AP02795 61 aa7.4□□□□□ -1.22
CDC42BPB-204ENST00000559043 MT1FP04733 61 aa7.37□□□□□ -1.23
CDC42BPB-204ENST00000559043 ROMO1P60602 79 aa7.37□□□□□ -1.23
CDC42BPB-204ENST00000559043 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
CDC42BPB-204ENST00000559043 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
CDC42BPB-204ENST00000559043 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
CDC42BPB-204ENST00000559043 LINC01554Q52M75 96 aa7.33□□□□□ -1.24
CDC42BPB-204ENST00000559043 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
CDC42BPB-204ENST00000559043 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
CDC42BPB-204ENST00000559043 R4GN34 69 aa7.24□□□□□ -1.25
CDC42BPB-204ENST00000559043 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
CDC42BPB-204ENST00000559043 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
CDC42BPB-204ENST00000559043 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPB-204ENST00000559043 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
CDC42BPB-204ENST00000559043 LCE2BO14633 110 aa7.11□□□□□ -1.27
CDC42BPB-204ENST00000559043 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
CDC42BPB-204ENST00000559043 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
CDC42BPB-204ENST00000559043 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
CDC42BPB-204ENST00000559043 USH2AO75445 5202 aa7.01□□□□□ -1.29
CDC42BPB-204ENST00000559043 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
CDC42BPB-204ENST00000559043 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
CDC42BPB-204ENST00000559043 MT1BP07438 61 aa6.89□□□□□ -1.31
CDC42BPB-204ENST00000559043 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
CDC42BPB-204ENST00000559043 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
CDC42BPB-204ENST00000559043 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
CDC42BPB-204ENST00000559043 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
CDC42BPB-204ENST00000559043 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
CDC42BPB-204ENST00000559043 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
CDC42BPB-204ENST00000559043 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
CDC42BPB-204ENST00000559043 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
CDC42BPB-204ENST00000559043 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPB-204ENST00000559043 H3BS24 57 aa6.6□□□□□ -1.35
CDC42BPB-204ENST00000559043 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
CDC42BPB-204ENST00000559043 MT1XP80297 61 aa6.58□□□□□ -1.36
CDC42BPB-204ENST00000559043 TNP1P09430 55 aa6.58□□□□□ -1.36
CDC42BPB-204ENST00000559043 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
CDC42BPB-204ENST00000559043 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
CDC42BPB-204ENST00000559043 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
CDC42BPB-204ENST00000559043 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPB-204ENST00000559043 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPB-204ENST00000559043 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
CDC42BPB-204ENST00000559043 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
CDC42BPB-204ENST00000559043 KMT2DO14686 5537 aa6.23□□□□□ -1.41
CDC42BPB-204ENST00000559043 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
CDC42BPB-204ENST00000559043 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
CDC42BPB-204ENST00000559043 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
CDC42BPB-204ENST00000559043 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
CDC42BPB-204ENST00000559043 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
CDC42BPB-204ENST00000559043 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
CDC42BPB-204ENST00000559043 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
CDC42BPB-204ENST00000559043 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
CDC42BPB-204ENST00000559043 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
CDC42BPB-204ENST00000559043 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
CDC42BPB-204ENST00000559043 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
CDC42BPB-204ENST00000559043 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms