RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
GABPB1-208ENST00000558970 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-208ENST00000558970 SNURFQ9Y675 71 aa6.07□□□□□ -1.44
GABPB1-208ENST00000558970 H7BZZ5 65 aa6.05□□□□□ -1.44
GABPB1-208ENST00000558970 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
GABPB1-208ENST00000558970 S4R3F8 94 aa6.03□□□□□ -1.44
GABPB1-208ENST00000558970 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
GABPB1-208ENST00000558970 LCA10Q71F78 164 aa5.99□□□□□ -1.45
GABPB1-208ENST00000558970 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
GABPB1-208ENST00000558970 A8MUN3 132 aa5.94□□□□□ -1.46
GABPB1-208ENST00000558970 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
GABPB1-208ENST00000558970 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
GABPB1-208ENST00000558970 DMAC1Q96GE9 116 aa5.92□□□□□ -1.46
GABPB1-208ENST00000558970 MT2AP02795 61 aa5.91□□□□□ -1.46
GABPB1-208ENST00000558970 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
GABPB1-208ENST00000558970 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
GABPB1-208ENST00000558970 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
GABPB1-208ENST00000558970 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
GABPB1-208ENST00000558970 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
GABPB1-208ENST00000558970 MT1FP04733 61 aa5.88□□□□□ -1.47
GABPB1-208ENST00000558970 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
GABPB1-208ENST00000558970 ACYP2P14621 99 aa5.84□□□□□ -1.47
GABPB1-208ENST00000558970 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
GABPB1-208ENST00000558970 USH2AO75445 5202 aa5.8□□□□□ -1.48
GABPB1-208ENST00000558970 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
GABPB1-208ENST00000558970 V9GYY9 64 aa5.79□□□□□ -1.48
GABPB1-208ENST00000558970 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
GABPB1-208ENST00000558970 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
GABPB1-208ENST00000558970 ADM2Q7Z4H4 148 aa5.72□□□□□ -1.49
GABPB1-208ENST00000558970 COA5Q86WW8 74 aa5.72□□□□□ -1.49
GABPB1-208ENST00000558970 Q1T7F1 81 aa5.71□□□□□ -1.5
GABPB1-208ENST00000558970 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
GABPB1-208ENST00000558970 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
GABPB1-208ENST00000558970 LCE2BO14633 110 aa5.67□□□□□ -1.5
GABPB1-208ENST00000558970 H0YAA0 97 aa5.66□□□□□ -1.5
GABPB1-208ENST00000558970 P0C880 135 aa5.63□□□□□ -1.51
GABPB1-208ENST00000558970 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
GABPB1-208ENST00000558970 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
GABPB1-208ENST00000558970 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
GABPB1-208ENST00000558970 CRIPTQ9P021 101 aa5.56□□□□□ -1.52
GABPB1-208ENST00000558970 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
GABPB1-208ENST00000558970 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
GABPB1-208ENST00000558970 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
GABPB1-208ENST00000558970 R4GN34 69 aa5.54□□□□□ -1.52
GABPB1-208ENST00000558970 M0QZ58 72 aa5.53□□□□□ -1.52
GABPB1-208ENST00000558970 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
GABPB1-208ENST00000558970 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
GABPB1-208ENST00000558970 Q5VV11 94 aa5.49□□□□□ -1.53
GABPB1-208ENST00000558970 SEC61GP60059 68 aa5.48□□□□□ -1.53
GABPB1-208ENST00000558970 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
GABPB1-208ENST00000558970 PSPHP1O15172 72 aa5.47□□□□□ -1.53
GABPB1-208ENST00000558970 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
GABPB1-208ENST00000558970 MT1BP07438 61 aa5.46□□□□□ -1.54
GABPB1-208ENST00000558970 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
GABPB1-208ENST00000558970 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
GABPB1-208ENST00000558970 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
GABPB1-208ENST00000558970 A0A1B0GU69 56 aa5.42□□□□□ -1.54
GABPB1-208ENST00000558970 A6NED7 52 aa5.39□□□□□ -1.55
GABPB1-208ENST00000558970 KRTAP13-4Q3LI77 160 aa5.39□□□□□ -1.55
GABPB1-208ENST00000558970 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
GABPB1-208ENST00000558970 A0A1B0GU33 70 aa5.35□□□□□ -1.55
GABPB1-208ENST00000558970 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
GABPB1-208ENST00000558970 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
GABPB1-208ENST00000558970 A0A0D9SG42 100 aa5.32□□□□□ -1.56
GABPB1-208ENST00000558970 NEBP20929 6669 aa5.32□□□□□ -1.56
GABPB1-208ENST00000558970 UQCR11O14957 56 aa5.31□□□□□ -1.56
GABPB1-208ENST00000558970 A6NN06 94 aa5.3□□□□□ -1.56
GABPB1-208ENST00000558970 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
GABPB1-208ENST00000558970 A8MU10 97 aa5.22□□□□□ -1.57
GABPB1-208ENST00000558970 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
GABPB1-208ENST00000558970 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
GABPB1-208ENST00000558970 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
GABPB1-208ENST00000558970 MT1XP80297 61 aa5.21□□□□□ -1.58
GABPB1-208ENST00000558970 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
GABPB1-208ENST00000558970 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
GABPB1-208ENST00000558970 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
GABPB1-208ENST00000558970 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
GABPB1-208ENST00000558970 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
GABPB1-208ENST00000558970 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
GABPB1-208ENST00000558970 K7ERS5 55 aa5.08□□□□□ -1.6
GABPB1-208ENST00000558970 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
GABPB1-208ENST00000558970 MDN1Q9NU22 5596 aa5.06□□□□□ -1.6
GABPB1-208ENST00000558970 KMT2DO14686 5537 aa5.06□□□□□ -1.6
GABPB1-208ENST00000558970 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
GABPB1-208ENST00000558970 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-208ENST00000558970 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
GABPB1-208ENST00000558970 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
GABPB1-208ENST00000558970 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
GABPB1-208ENST00000558970 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
GABPB1-208ENST00000558970 KRTAP10-12P60413 245 aa4.91□□□□□ -1.62
GABPB1-208ENST00000558970 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.63
GABPB1-208ENST00000558970 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
GABPB1-208ENST00000558970 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
GABPB1-208ENST00000558970 TNP1P09430 55 aa4.8□□□□□ -1.64
GABPB1-208ENST00000558970 ROMO1P60602 79 aa4.8□□□□□ -1.64
GABPB1-208ENST00000558970 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
GABPB1-208ENST00000558970 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
GABPB1-208ENST00000558970 SPRR2EP22531 72 aa4.76□□□□□ -1.65
GABPB1-208ENST00000558970 SPRR2BP35325 72 aa4.76□□□□□ -1.65
GABPB1-208ENST00000558970 SPRR2AP35326 72 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms