RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SCGB1A1P11684 91 aa5.71□□□□□ -1.5
SMAD3-208ENST00000558827 ATOX1O00244 68 aa5.67□□□□□ -1.5
SMAD3-208ENST00000558827 H0Y9P7 68 aa5.66□□□□□ -1.5
SMAD3-208ENST00000558827 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
SMAD3-208ENST00000558827 LOC101927531A0A1B0GV80 90 aa5.64□□□□□ -1.51
SMAD3-208ENST00000558827 MP68P56378 58 aa5.64□□□□□ -1.51
SMAD3-208ENST00000558827 OCR1Q9BZK8 76 aa5.64□□□□□ -1.51
SMAD3-208ENST00000558827 MT1BP07438 61 aa5.62□□□□□ -1.51
SMAD3-208ENST00000558827 Q5VV11 94 aa5.6□□□□□ -1.51
SMAD3-208ENST00000558827 SMIM20Q8N5G0 67 aa5.6□□□□□ -1.51
SMAD3-208ENST00000558827 KLKP1Q107X0 134 aa5.59□□□□□ -1.51
SMAD3-208ENST00000558827 LINC00208Q96KT6 92 aa5.59□□□□□ -1.51
SMAD3-208ENST00000558827 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
SMAD3-208ENST00000558827 A6NN06 94 aa5.57□□□□□ -1.52
SMAD3-208ENST00000558827 H3BPC8 53 aa5.57□□□□□ -1.52
SMAD3-208ENST00000558827 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
SMAD3-208ENST00000558827 TRAV7A0A075B6U4 112 aa5.55□□□□□ -1.52
SMAD3-208ENST00000558827 NDUFC1O43677 76 aa5.52□□□□□ -1.53
SMAD3-208ENST00000558827 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
SMAD3-208ENST00000558827 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
SMAD3-208ENST00000558827 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
SMAD3-208ENST00000558827 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
SMAD3-208ENST00000558827 A8MUN3 132 aa5.44□□□□□ -1.54
SMAD3-208ENST00000558827 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
SMAD3-208ENST00000558827 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
SMAD3-208ENST00000558827 NEBP20929 6669 aa5.42□□□□□ -1.54
SMAD3-208ENST00000558827 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
SMAD3-208ENST00000558827 H0YAA0 97 aa5.39□□□□□ -1.55
SMAD3-208ENST00000558827 COX7CP15954 63 aa5.37□□□□□ -1.55
SMAD3-208ENST00000558827 ANAPC13Q9BS18 74 aa5.36□□□□□ -1.55
SMAD3-208ENST00000558827 P0C880 135 aa5.35□□□□□ -1.55
SMAD3-208ENST00000558827 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
SMAD3-208ENST00000558827 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
SMAD3-208ENST00000558827 ACYP2P14621 99 aa5.3□□□□□ -1.56
SMAD3-208ENST00000558827 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
SMAD3-208ENST00000558827 R4GN34 69 aa5.29□□□□□ -1.56
SMAD3-208ENST00000558827 M0QZ58 72 aa5.28□□□□□ -1.56
SMAD3-208ENST00000558827 PLAC4Q8WY50 150 aa5.28□□□□□ -1.56
SMAD3-208ENST00000558827 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
SMAD3-208ENST00000558827 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
SMAD3-208ENST00000558827 MT1XP80297 61 aa5.26□□□□□ -1.57
SMAD3-208ENST00000558827 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
SMAD3-208ENST00000558827 KMT2DO14686 5537 aa5.24□□□□□ -1.57
SMAD3-208ENST00000558827 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
SMAD3-208ENST00000558827 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
SMAD3-208ENST00000558827 H7BZZ5 65 aa5.21□□□□□ -1.58
SMAD3-208ENST00000558827 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
SMAD3-208ENST00000558827 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
SMAD3-208ENST00000558827 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
SMAD3-208ENST00000558827 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
SMAD3-208ENST00000558827 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
SMAD3-208ENST00000558827 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
SMAD3-208ENST00000558827 COA5Q86WW8 74 aa5.14□□□□□ -1.59
SMAD3-208ENST00000558827 ATP5EP56381 51 aaPredicted RBP5.11□□□□□ -1.59
SMAD3-208ENST00000558827 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
SMAD3-208ENST00000558827 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
SMAD3-208ENST00000558827 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
SMAD3-208ENST00000558827 SPRR2EP22531 72 aa5.09□□□□□ -1.59
SMAD3-208ENST00000558827 SPRR2BP35325 72 aa5.09□□□□□ -1.59
SMAD3-208ENST00000558827 SPRR2AP35326 72 aa5.09□□□□□ -1.59
SMAD3-208ENST00000558827 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
SMAD3-208ENST00000558827 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
SMAD3-208ENST00000558827 TMEM258P61165 79 aa5.06□□□□□ -1.6
SMAD3-208ENST00000558827 SEC61GP60059 68 aa5.02□□□□□ -1.61
SMAD3-208ENST00000558827 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
SMAD3-208ENST00000558827 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
SMAD3-208ENST00000558827 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
SMAD3-208ENST00000558827 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
SMAD3-208ENST00000558827 SERP1Q9Y6X1 66 aa4.98□□□□□ -1.61
SMAD3-208ENST00000558827 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
SMAD3-208ENST00000558827 PCP4P48539 62 aa4.94□□□□□ -1.62
SMAD3-208ENST00000558827 SPRR2DP22532 72 aa4.91□□□□□ -1.62
SMAD3-208ENST00000558827 A0A1B0GU69 56 aa4.9□□□□□ -1.63
SMAD3-208ENST00000558827 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
SMAD3-208ENST00000558827 A0A0D9SG42 100 aa4.88□□□□□ -1.63
SMAD3-208ENST00000558827 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
SMAD3-208ENST00000558827 A0A1B0GU33 70 aa4.84□□□□□ -1.63
SMAD3-208ENST00000558827 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
SMAD3-208ENST00000558827 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
SMAD3-208ENST00000558827 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
SMAD3-208ENST00000558827 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
SMAD3-208ENST00000558827 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
SMAD3-208ENST00000558827 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
SMAD3-208ENST00000558827 V9GYY9 64 aa4.76□□□□□ -1.65
SMAD3-208ENST00000558827 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
SMAD3-208ENST00000558827 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
SMAD3-208ENST00000558827 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
SMAD3-208ENST00000558827 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
SMAD3-208ENST00000558827 A8MU10 97 aa4.68□□□□□ -1.66
SMAD3-208ENST00000558827 UQCR11O14957 56 aa4.68□□□□□ -1.66
SMAD3-208ENST00000558827 Q1T7F1 81 aa4.68□□□□□ -1.66
SMAD3-208ENST00000558827 MT1EP04732 61 aa4.66□□□□□ -1.66
SMAD3-208ENST00000558827 PSPHP1O15172 72 aa4.65□□□□□ -1.67
SMAD3-208ENST00000558827 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
SMAD3-208ENST00000558827 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
SMAD3-208ENST00000558827 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
SMAD3-208ENST00000558827 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
SMAD3-208ENST00000558827 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
SMAD3-208ENST00000558827 A6NED7 52 aa4.55□□□□□ -1.68
SMAD3-208ENST00000558827 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms