RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
RABGGTA-206ENST00000558649 USH2AO75445 5202 aa7.34□□□□□ -1.23
RABGGTA-206ENST00000558649 A8MUN3 132 aa7.33□□□□□ -1.24
RABGGTA-206ENST00000558649 TRAV7A0A075B6U4 112 aa7.29□□□□□ -1.24
RABGGTA-206ENST00000558649 NDUFC1O43677 76 aa7.29□□□□□ -1.24
RABGGTA-206ENST00000558649 SMIM20Q8N5G0 67 aa7.29□□□□□ -1.24
RABGGTA-206ENST00000558649 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
RABGGTA-206ENST00000558649 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
RABGGTA-206ENST00000558649 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
RABGGTA-206ENST00000558649 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
RABGGTA-206ENST00000558649 H0YAA0 97 aa7.12□□□□□ -1.27
RABGGTA-206ENST00000558649 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
RABGGTA-206ENST00000558649 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
RABGGTA-206ENST00000558649 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
RABGGTA-206ENST00000558649 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
RABGGTA-206ENST00000558649 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
RABGGTA-206ENST00000558649 ACYP2P14621 99 aa7.08□□□□□ -1.28
RABGGTA-206ENST00000558649 Q5VV11 94 aa7.07□□□□□ -1.28
RABGGTA-206ENST00000558649 CRIPTQ9P021 101 aa7.07□□□□□ -1.28
RABGGTA-206ENST00000558649 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
RABGGTA-206ENST00000558649 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
RABGGTA-206ENST00000558649 MT1BP07438 61 aa7.03□□□□□ -1.28
RABGGTA-206ENST00000558649 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
RABGGTA-206ENST00000558649 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
RABGGTA-206ENST00000558649 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
RABGGTA-206ENST00000558649 P0C880 135 aa6.97□□□□□ -1.29
RABGGTA-206ENST00000558649 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
RABGGTA-206ENST00000558649 COX7CP15954 63 aa6.96□□□□□ -1.3
RABGGTA-206ENST00000558649 R4GN34 69 aa6.92□□□□□ -1.3
RABGGTA-206ENST00000558649 A6NN06 94 aa6.91□□□□□ -1.3
RABGGTA-206ENST00000558649 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
RABGGTA-206ENST00000558649 M0QZ58 72 aa6.89□□□□□ -1.31
RABGGTA-206ENST00000558649 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
RABGGTA-206ENST00000558649 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
RABGGTA-206ENST00000558649 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
RABGGTA-206ENST00000558649 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
RABGGTA-206ENST00000558649 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
RABGGTA-206ENST00000558649 COA5Q86WW8 74 aa6.82□□□□□ -1.32
RABGGTA-206ENST00000558649 H7BZZ5 65 aa6.81□□□□□ -1.32
RABGGTA-206ENST00000558649 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
RABGGTA-206ENST00000558649 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
RABGGTA-206ENST00000558649 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
RABGGTA-206ENST00000558649 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
RABGGTA-206ENST00000558649 MT1XP80297 61 aa6.65□□□□□ -1.34
RABGGTA-206ENST00000558649 SEC61GP60059 68 aa6.63□□□□□ -1.35
RABGGTA-206ENST00000558649 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
RABGGTA-206ENST00000558649 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
RABGGTA-206ENST00000558649 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
RABGGTA-206ENST00000558649 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
RABGGTA-206ENST00000558649 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
RABGGTA-206ENST00000558649 A0A1B0GU33 70 aa6.48□□□□□ -1.37
RABGGTA-206ENST00000558649 SPATA8Q6RVD6 105 aa6.48□□□□□ -1.37
RABGGTA-206ENST00000558649 A0A0D9SG42 100 aa6.47□□□□□ -1.37
RABGGTA-206ENST00000558649 A0A1B0GU69 56 aa6.47□□□□□ -1.37
RABGGTA-206ENST00000558649 TMEM258P61165 79 aa6.44□□□□□ -1.38
RABGGTA-206ENST00000558649 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
RABGGTA-206ENST00000558649 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
RABGGTA-206ENST00000558649 KRTAP5-9P26371 169 aa6.38□□□□□ -1.39
RABGGTA-206ENST00000558649 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
RABGGTA-206ENST00000558649 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
RABGGTA-206ENST00000558649 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
RABGGTA-206ENST00000558649 KMT2DO14686 5537 aa6.35□□□□□ -1.39
RABGGTA-206ENST00000558649 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
RABGGTA-206ENST00000558649 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
RABGGTA-206ENST00000558649 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
RABGGTA-206ENST00000558649 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
RABGGTA-206ENST00000558649 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
RABGGTA-206ENST00000558649 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
RABGGTA-206ENST00000558649 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
RABGGTA-206ENST00000558649 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
RABGGTA-206ENST00000558649 A8MU10 97 aa6.28□□□□□ -1.4
RABGGTA-206ENST00000558649 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
RABGGTA-206ENST00000558649 SPRR2EP22531 72 aa6.18□□□□□ -1.42
RABGGTA-206ENST00000558649 SPRR2BP35325 72 aa6.18□□□□□ -1.42
RABGGTA-206ENST00000558649 SPRR2AP35326 72 aa6.18□□□□□ -1.42
RABGGTA-206ENST00000558649 NEBP20929 6669 aa6.17□□□□□ -1.42
RABGGTA-206ENST00000558649 UQCR11O14957 56 aa6.11□□□□□ -1.43
RABGGTA-206ENST00000558649 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
RABGGTA-206ENST00000558649 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
RABGGTA-206ENST00000558649 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
RABGGTA-206ENST00000558649 PSPHP1O15172 72 aa6.05□□□□□ -1.44
RABGGTA-206ENST00000558649 PCP4P48539 62 aa6.04□□□□□ -1.44
RABGGTA-206ENST00000558649 V9GYY9 64 aa6.04□□□□□ -1.44
RABGGTA-206ENST00000558649 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
RABGGTA-206ENST00000558649 Q1T7F1 81 aa6□□□□□ -1.45
RABGGTA-206ENST00000558649 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
RABGGTA-206ENST00000558649 SPRR2DP22532 72 aa5.97□□□□□ -1.45
RABGGTA-206ENST00000558649 TNP1P09430 55 aa5.93□□□□□ -1.46
RABGGTA-206ENST00000558649 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
RABGGTA-206ENST00000558649 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
RABGGTA-206ENST00000558649 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
RABGGTA-206ENST00000558649 MT1EP04732 61 aa5.88□□□□□ -1.47
RABGGTA-206ENST00000558649 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
RABGGTA-206ENST00000558649 K7ERS5 55 aa5.86□□□□□ -1.47
RABGGTA-206ENST00000558649 A6NED7 52 aa5.85□□□□□ -1.47
RABGGTA-206ENST00000558649 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
RABGGTA-206ENST00000558649 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
RABGGTA-206ENST00000558649 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RABGGTA-206ENST00000558649 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
RABGGTA-206ENST00000558649 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms