RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
TPM1-212ENST00000558347 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
TPM1-212ENST00000558347 A6NED7 52 aa5.6□□□□□ -1.51
TPM1-212ENST00000558347 XP32Q5T750 250 aa5.6□□□□□ -1.51
TPM1-212ENST00000558347 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
TPM1-212ENST00000558347 SEC61BP60468 96 aaKnown RBP5.58□□□□□ -1.52
TPM1-212ENST00000558347 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
TPM1-212ENST00000558347 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
TPM1-212ENST00000558347 LCA10Q71F78 164 aa5.56□□□□□ -1.52
TPM1-212ENST00000558347 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
TPM1-212ENST00000558347 A8MU10 97 aa5.52□□□□□ -1.53
TPM1-212ENST00000558347 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
TPM1-212ENST00000558347 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
TPM1-212ENST00000558347 SPINK7P58062 85 aa5.49□□□□□ -1.53
TPM1-212ENST00000558347 A6NN06 94 aa5.48□□□□□ -1.53
TPM1-212ENST00000558347 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
TPM1-212ENST00000558347 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
TPM1-212ENST00000558347 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
TPM1-212ENST00000558347 A0A1B0GU69 56 aa5.46□□□□□ -1.54
TPM1-212ENST00000558347 A8MUU9 505 aa5.46□□□□□ -1.54
TPM1-212ENST00000558347 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
TPM1-212ENST00000558347 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
TPM1-212ENST00000558347 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
TPM1-212ENST00000558347 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
TPM1-212ENST00000558347 SPATA8Q6RVD6 105 aa5.4□□□□□ -1.54
TPM1-212ENST00000558347 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
TPM1-212ENST00000558347 UQCR11O14957 56 aa5.38□□□□□ -1.55
TPM1-212ENST00000558347 MT1HP80294 61 aa5.38□□□□□ -1.55
TPM1-212ENST00000558347 SEC61GP60059 68 aa5.36□□□□□ -1.55
TPM1-212ENST00000558347 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
TPM1-212ENST00000558347 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
TPM1-212ENST00000558347 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
TPM1-212ENST00000558347 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
TPM1-212ENST00000558347 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
TPM1-212ENST00000558347 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
TPM1-212ENST00000558347 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
TPM1-212ENST00000558347 M0R2T5 61 aa5.25□□□□□ -1.57
TPM1-212ENST00000558347 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
TPM1-212ENST00000558347 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
TPM1-212ENST00000558347 A0A1B0GU33 70 aa5.18□□□□□ -1.58
TPM1-212ENST00000558347 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
TPM1-212ENST00000558347 H0YAA0 97 aa5.15□□□□□ -1.58
TPM1-212ENST00000558347 USH2AO75445 5202 aa5.14□□□□□ -1.59
TPM1-212ENST00000558347 LCE2BO14633 110 aa5.11□□□□□ -1.59
TPM1-212ENST00000558347 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
TPM1-212ENST00000558347 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
TPM1-212ENST00000558347 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
TPM1-212ENST00000558347 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
TPM1-212ENST00000558347 K7ERS5 55 aa5.05□□□□□ -1.6
TPM1-212ENST00000558347 S4R3F8 94 aa5.04□□□□□ -1.6
TPM1-212ENST00000558347 LINC01554Q52M75 96 aa5.03□□□□□ -1.6
TPM1-212ENST00000558347 MT2AP02795 61 aa5.02□□□□□ -1.61
TPM1-212ENST00000558347 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
TPM1-212ENST00000558347 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
TPM1-212ENST00000558347 MT1FP04733 61 aa4.98□□□□□ -1.61
TPM1-212ENST00000558347 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
TPM1-212ENST00000558347 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.93□□□□□ -1.62
TPM1-212ENST00000558347 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
TPM1-212ENST00000558347 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
TPM1-212ENST00000558347 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
TPM1-212ENST00000558347 ROMO1P60602 79 aa4.91□□□□□ -1.62
TPM1-212ENST00000558347 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
TPM1-212ENST00000558347 P0C880 135 aa4.87□□□□□ -1.63
TPM1-212ENST00000558347 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
TPM1-212ENST00000558347 A0A0D9SG42 100 aa4.83□□□□□ -1.64
TPM1-212ENST00000558347 M0QZ58 72 aa4.83□□□□□ -1.64
TPM1-212ENST00000558347 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
TPM1-212ENST00000558347 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
TPM1-212ENST00000558347 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
TPM1-212ENST00000558347 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
TPM1-212ENST00000558347 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
TPM1-212ENST00000558347 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
TPM1-212ENST00000558347 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
TPM1-212ENST00000558347 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
TPM1-212ENST00000558347 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
TPM1-212ENST00000558347 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
TPM1-212ENST00000558347 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
TPM1-212ENST00000558347 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
TPM1-212ENST00000558347 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
TPM1-212ENST00000558347 R4GN34 69 aa4.64□□□□□ -1.67
TPM1-212ENST00000558347 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
TPM1-212ENST00000558347 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
TPM1-212ENST00000558347 MT1BP07438 61 aa4.56□□□□□ -1.68
TPM1-212ENST00000558347 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
TPM1-212ENST00000558347 KRTAP19-8Q3LI54 63 aa4.54□□□□□ -1.68
TPM1-212ENST00000558347 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
TPM1-212ENST00000558347 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
TPM1-212ENST00000558347 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
TPM1-212ENST00000558347 H3BS24 57 aa4.47□□□□□ -1.69
TPM1-212ENST00000558347 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
TPM1-212ENST00000558347 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
TPM1-212ENST00000558347 NEBP20929 6669 aa4.42□□□□□ -1.7
TPM1-212ENST00000558347 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
TPM1-212ENST00000558347 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
TPM1-212ENST00000558347 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
TPM1-212ENST00000558347 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
TPM1-212ENST00000558347 MDN1Q9NU22 5596 aa4.4□□□□□ -1.71
TPM1-212ENST00000558347 KMT2DO14686 5537 aa4.38□□□□□ -1.71
TPM1-212ENST00000558347 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
TPM1-212ENST00000558347 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms