RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
SUPT16H-208ENST00000557652 COX7CP15954 63 aa6.82□□□□□ -1.32
SUPT16H-208ENST00000557652 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
SUPT16H-208ENST00000557652 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
SUPT16H-208ENST00000557652 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
SUPT16H-208ENST00000557652 SPANXA2-OT1Q8N9U9 137 aa6.77□□□□□ -1.33
SUPT16H-208ENST00000557652 SNURFQ9Y675 71 aa6.77□□□□□ -1.33
SUPT16H-208ENST00000557652 NDUFC1O43677 76 aa6.76□□□□□ -1.33
SUPT16H-208ENST00000557652 LCA10Q71F78 164 aa6.76□□□□□ -1.33
SUPT16H-208ENST00000557652 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
SUPT16H-208ENST00000557652 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
SUPT16H-208ENST00000557652 ACYP2P14621 99 aa6.72□□□□□ -1.33
SUPT16H-208ENST00000557652 MT2AP02795 61 aa6.69□□□□□ -1.34
SUPT16H-208ENST00000557652 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
SUPT16H-208ENST00000557652 H0YAA0 97 aa6.63□□□□□ -1.35
SUPT16H-208ENST00000557652 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
SUPT16H-208ENST00000557652 MT1FP04733 61 aa6.62□□□□□ -1.35
SUPT16H-208ENST00000557652 SPTSSBQ8NFR3 76 aa6.62□□□□□ -1.35
SUPT16H-208ENST00000557652 H7BZZ5 65 aa6.61□□□□□ -1.35
SUPT16H-208ENST00000557652 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
SUPT16H-208ENST00000557652 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
SUPT16H-208ENST00000557652 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
SUPT16H-208ENST00000557652 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
SUPT16H-208ENST00000557652 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
SUPT16H-208ENST00000557652 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
SUPT16H-208ENST00000557652 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
SUPT16H-208ENST00000557652 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
SUPT16H-208ENST00000557652 CYSTM1Q9H1C7 97 aa6.52□□□□□ -1.37
SUPT16H-208ENST00000557652 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
SUPT16H-208ENST00000557652 COA5Q86WW8 74 aa6.47□□□□□ -1.37
SUPT16H-208ENST00000557652 TMEM258P61165 79 aa6.44□□□□□ -1.38
SUPT16H-208ENST00000557652 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
SUPT16H-208ENST00000557652 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
SUPT16H-208ENST00000557652 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
SUPT16H-208ENST00000557652 P0C880 135 aa6.32□□□□□ -1.4
SUPT16H-208ENST00000557652 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
SUPT16H-208ENST00000557652 R4GN34 69 aa6.31□□□□□ -1.4
SUPT16H-208ENST00000557652 SEC61GP60059 68 aa6.3□□□□□ -1.4
SUPT16H-208ENST00000557652 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
SUPT16H-208ENST00000557652 Q5VV11 94 aa6.27□□□□□ -1.41
SUPT16H-208ENST00000557652 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
SUPT16H-208ENST00000557652 USH2AO75445 5202 aa6.26□□□□□ -1.41
SUPT16H-208ENST00000557652 M0QZ58 72 aa6.26□□□□□ -1.41
SUPT16H-208ENST00000557652 PCP4P48539 62 aa6.24□□□□□ -1.41
SUPT16H-208ENST00000557652 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
SUPT16H-208ENST00000557652 MT1BP07438 61 aa6.19□□□□□ -1.42
SUPT16H-208ENST00000557652 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
SUPT16H-208ENST00000557652 A0A1B0GU69 56 aa6.17□□□□□ -1.42
SUPT16H-208ENST00000557652 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
SUPT16H-208ENST00000557652 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
SUPT16H-208ENST00000557652 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
SUPT16H-208ENST00000557652 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
SUPT16H-208ENST00000557652 A6NN06 94 aa6.12□□□□□ -1.43
SUPT16H-208ENST00000557652 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
SUPT16H-208ENST00000557652 A0A1B0GU33 70 aa6.11□□□□□ -1.43
SUPT16H-208ENST00000557652 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
SUPT16H-208ENST00000557652 V9GYY9 64 aa6.08□□□□□ -1.44
SUPT16H-208ENST00000557652 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
SUPT16H-208ENST00000557652 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
SUPT16H-208ENST00000557652 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
SUPT16H-208ENST00000557652 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
SUPT16H-208ENST00000557652 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
SUPT16H-208ENST00000557652 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
SUPT16H-208ENST00000557652 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
SUPT16H-208ENST00000557652 Q1T7F1 81 aa5.99□□□□□ -1.45
SUPT16H-208ENST00000557652 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
SUPT16H-208ENST00000557652 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
SUPT16H-208ENST00000557652 SPATA8Q6RVD6 105 aa5.94□□□□□ -1.46
SUPT16H-208ENST00000557652 UQCR11O14957 56 aa5.93□□□□□ -1.46
SUPT16H-208ENST00000557652 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
SUPT16H-208ENST00000557652 MT1XP80297 61 aa5.89□□□□□ -1.47
SUPT16H-208ENST00000557652 A0A0D9SG42 100 aa5.88□□□□□ -1.47
SUPT16H-208ENST00000557652 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
SUPT16H-208ENST00000557652 KRTAP12-1P59990 96 aa5.83□□□□□ -1.48
SUPT16H-208ENST00000557652 PSPHP1O15172 72 aa5.82□□□□□ -1.48
SUPT16H-208ENST00000557652 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
SUPT16H-208ENST00000557652 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
SUPT16H-208ENST00000557652 A8MU10 97 aa5.78□□□□□ -1.48
SUPT16H-208ENST00000557652 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SUPT16H-208ENST00000557652 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
SUPT16H-208ENST00000557652 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
SUPT16H-208ENST00000557652 A6NED7 52 aa5.7□□□□□ -1.5
SUPT16H-208ENST00000557652 K7ERS5 55 aa5.7□□□□□ -1.5
SUPT16H-208ENST00000557652 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
SUPT16H-208ENST00000557652 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
SUPT16H-208ENST00000557652 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.5
SUPT16H-208ENST00000557652 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
SUPT16H-208ENST00000557652 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
SUPT16H-208ENST00000557652 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
SUPT16H-208ENST00000557652 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
SUPT16H-208ENST00000557652 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
SUPT16H-208ENST00000557652 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
SUPT16H-208ENST00000557652 TNP1P09430 55 aa5.52□□□□□ -1.53
SUPT16H-208ENST00000557652 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
SUPT16H-208ENST00000557652 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
SUPT16H-208ENST00000557652 H3BS24 57 aa5.46□□□□□ -1.54
SUPT16H-208ENST00000557652 KMT2DO14686 5537 aa5.42□□□□□ -1.54
SUPT16H-208ENST00000557652 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
SUPT16H-208ENST00000557652 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
SUPT16H-208ENST00000557652 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms