RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 A8MUN3 132 aa7.55□□□□□ -1.2
ABCD4-228ENST00000557588 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
ABCD4-228ENST00000557588 M0R143 59 aa7.54□□□□□ -1.2
ABCD4-228ENST00000557588 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
ABCD4-228ENST00000557588 H3BT86 120 aa7.53□□□□□ -1.2
ABCD4-228ENST00000557588 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
ABCD4-228ENST00000557588 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
ABCD4-228ENST00000557588 CYP4F30PQ9H0H9 118 aa7.45□□□□□ -1.22
ABCD4-228ENST00000557588 TSTD3H0UI37 97 aa7.44□□□□□ -1.22
ABCD4-228ENST00000557588 NDUFC1O43677 76 aa7.43□□□□□ -1.22
ABCD4-228ENST00000557588 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
ABCD4-228ENST00000557588 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
ABCD4-228ENST00000557588 DSTQ03001 7570 aaKnown RBP7.36□□□□□ -1.23
ABCD4-228ENST00000557588 KRTAP10-7P60409 375 aaPredicted RBP7.33□□□□□ -1.24
ABCD4-228ENST00000557588 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
ABCD4-228ENST00000557588 LOC101927531A0A1B0GV80 90 aa7.32□□□□□ -1.24
ABCD4-228ENST00000557588 K7EP34 96 aa7.31□□□□□ -1.24
ABCD4-228ENST00000557588 R4GN34 69 aa7.29□□□□□ -1.24
ABCD4-228ENST00000557588 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
ABCD4-228ENST00000557588 A0A1W2PPM0 123 aa7.27□□□□□ -1.25
ABCD4-228ENST00000557588 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
ABCD4-228ENST00000557588 BATFQ16520 125 aa7.23□□□□□ -1.25
ABCD4-228ENST00000557588 KRTAP4-9Q9BYQ8 210 aa7.22□□□□□ -1.25
ABCD4-228ENST00000557588 M0QZ58 72 aa7.21□□□□□ -1.26
ABCD4-228ENST00000557588 ACYP1P07311 99 aa7.2□□□□□ -1.26
ABCD4-228ENST00000557588 P0C880 135 aa7.2□□□□□ -1.26
ABCD4-228ENST00000557588 TAX1BP3O14907 124 aa7.18□□□□□ -1.26
ABCD4-228ENST00000557588 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
ABCD4-228ENST00000557588 TMA7Q9Y2S6 64 aaKnown RBP7.17□□□□□ -1.26
ABCD4-228ENST00000557588 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
ABCD4-228ENST00000557588 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
ABCD4-228ENST00000557588 ATOX1O00244 68 aa7.08□□□□□ -1.28
ABCD4-228ENST00000557588 H0Y9P7 68 aa7.06□□□□□ -1.28
ABCD4-228ENST00000557588 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
ABCD4-228ENST00000557588 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
ABCD4-228ENST00000557588 UQCRQO14949 82 aa7.04□□□□□ -1.28
ABCD4-228ENST00000557588 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
ABCD4-228ENST00000557588 SMIM6P0DI80 62 aa7.03□□□□□ -1.28
ABCD4-228ENST00000557588 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
ABCD4-228ENST00000557588 HMCN1Q96RW7 5635 aa6.98□□□□□ -1.29
ABCD4-228ENST00000557588 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
ABCD4-228ENST00000557588 AHNAK2Q8IVF2 5795 aa6.93□□□□□ -1.3
ABCD4-228ENST00000557588 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
ABCD4-228ENST00000557588 MT1EP04732 61 aa6.88□□□□□ -1.31
ABCD4-228ENST00000557588 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
ABCD4-228ENST00000557588 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
ABCD4-228ENST00000557588 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
ABCD4-228ENST00000557588 MT4P47944 62 aa6.83□□□□□ -1.32
ABCD4-228ENST00000557588 KRTAP5-10Q6L8G5 202 aa6.83□□□□□ -1.32
ABCD4-228ENST00000557588 ATP5EP2Q5VTU8 51 aa6.81□□□□□ -1.32
ABCD4-228ENST00000557588 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
ABCD4-228ENST00000557588 HIST1H4AP62805 103 aaKnown RBP6.8□□□□□ -1.32
ABCD4-228ENST00000557588 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
ABCD4-228ENST00000557588 ETDBQ3ZM63 59 aa6.78□□□□□ -1.32
ABCD4-228ENST00000557588 MP68P56378 58 aa6.75□□□□□ -1.33
ABCD4-228ENST00000557588 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
ABCD4-228ENST00000557588 F8W1H4 67 aa6.72□□□□□ -1.33
ABCD4-228ENST00000557588 MT1GP13640 62 aa6.69□□□□□ -1.34
ABCD4-228ENST00000557588 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
ABCD4-228ENST00000557588 GTF2H5Q6ZYL4 71 aa6.67□□□□□ -1.34
ABCD4-228ENST00000557588 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
ABCD4-228ENST00000557588 FAM240AA0A1B0GVK7 77 aa6.64□□□□□ -1.35
ABCD4-228ENST00000557588 KRTAP5-7Q6L8G8 165 aa6.64□□□□□ -1.35
ABCD4-228ENST00000557588 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
ABCD4-228ENST00000557588 TRAV7A0A075B6U4 112 aa6.62□□□□□ -1.35
ABCD4-228ENST00000557588 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
ABCD4-228ENST00000557588 H3BPC8 53 aa6.59□□□□□ -1.35
ABCD4-228ENST00000557588 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
ABCD4-228ENST00000557588 MT1MQ8N339 61 aa6.58□□□□□ -1.36
ABCD4-228ENST00000557588 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
ABCD4-228ENST00000557588 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
ABCD4-228ENST00000557588 SPTSSBQ8NFR3 76 aa6.52□□□□□ -1.37
ABCD4-228ENST00000557588 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
ABCD4-228ENST00000557588 LINC00643Q86TS7 51 aa6.5□□□□□ -1.37
ABCD4-228ENST00000557588 A0A0D9SG42 100 aa6.47□□□□□ -1.37
ABCD4-228ENST00000557588 ACYP2P14621 99 aa6.47□□□□□ -1.37
ABCD4-228ENST00000557588 MT1LQ93083 61 aa6.47□□□□□ -1.37
ABCD4-228ENST00000557588 LOC105371267A0A1B0GV96 52 aa6.44□□□□□ -1.38
ABCD4-228ENST00000557588 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
ABCD4-228ENST00000557588 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
ABCD4-228ENST00000557588 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
ABCD4-228ENST00000557588 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
ABCD4-228ENST00000557588 SCGB1A1P11684 91 aa6.25□□□□□ -1.41
ABCD4-228ENST00000557588 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
ABCD4-228ENST00000557588 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
ABCD4-228ENST00000557588 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
ABCD4-228ENST00000557588 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
ABCD4-228ENST00000557588 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
ABCD4-228ENST00000557588 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
ABCD4-228ENST00000557588 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
ABCD4-228ENST00000557588 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
ABCD4-228ENST00000557588 PCP4L1A6NKN8 68 aa6.02□□□□□ -1.45
ABCD4-228ENST00000557588 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
ABCD4-228ENST00000557588 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
ABCD4-228ENST00000557588 SMIM20Q8N5G0 67 aa5.97□□□□□ -1.45
ABCD4-228ENST00000557588 TNP1P09430 55 aa5.94□□□□□ -1.46
ABCD4-228ENST00000557588 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
ABCD4-228ENST00000557588 SEC61GP60059 68 aa5.93□□□□□ -1.46
ABCD4-228ENST00000557588 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
ABCD4-228ENST00000557588 AHNAKQ09666 5890 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms