RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 KDM5DQ9BY66 1539 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 CEP350Q5VT06 3117 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 MED14O60244 1454 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 ERVK-7P63135 1459 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 SPEGQ15772 3267 aa-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 ETDCA0A1B0GVM5 59 aa-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 LINC01546A6NGU7 62 aa-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 MRPL33O75394 65 aaKnown RBP-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 ATP5EP2Q5VTU8 51 aa-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 UBL5Q9BZL1 73 aa-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 NOP10Q9NPE3 64 aaKnown RBP-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 HFM1A2PYH4 1435 aa-0.81□□□□□ -2.54
FOXN3-216ENST00000557496 DIP2AQ14689 1571 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 PVALEFA0A1B0GWK0 134 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 A8MTW9 85 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 H3BUA1 57 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 H3BUT2 72 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 M0QY20 66 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 M0QZ58 72 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 RALGAPBQ86X10 1494 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 C3P01024 1663 aa-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 FAM208AQ9UK61 1670 aaKnown RBP-0.82□□□□□ -2.54
FOXN3-216ENST00000557496 SZT2Q5T011 3432 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 ABCC6O95255 1503 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 CLASP1Q7Z460 1538 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 LMTK2Q8IWU2 1503 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 CROCC2H7BZ55 1655 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 KANTRA0A1W2PQU2 76 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 S100A8P05109 93 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 SPART-AS1P0CW21 52 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 KIF21BO75037 1637 aa-0.83□□□□□ -2.54
FOXN3-216ENST00000557496 Q9H521 79 aa-0.84□□□□□ -2.54
FOXN3-216ENST00000557496 ST20Q9HBF5 79 aa-0.84□□□□□ -2.54
FOXN3-216ENST00000557496 V9GYS6 101 aa-0.84□□□□□ -2.54
FOXN3-216ENST00000557496 MROH1Q8NDA8 1641 aa-0.85□□□□□ -2.55
FOXN3-216ENST00000557496 DNMBPQ6XZF7 1577 aa-0.85□□□□□ -2.55
FOXN3-216ENST00000557496 KAAG1Q9UBP8 84 aa-0.85□□□□□ -2.55
FOXN3-216ENST00000557496 GLI2P10070 1586 aa-0.86□□□□□ -2.55
FOXN3-216ENST00000557496 UACAQ9BZF9 1416 aa-0.86□□□□□ -2.55
FOXN3-216ENST00000557496 H3BVH4 76 aa-0.86□□□□□ -2.55
FOXN3-216ENST00000557496 DCHS1Q96JQ0 3298 aa-0.86□□□□□ -2.55
FOXN3-216ENST00000557496 DCAF1Q9Y4B6 1507 aa-0.86□□□□□ -2.55
FOXN3-216ENST00000557496 TIAM1Q13009 1591 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 CFAP74Q9C0B2 1584 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 ADIRFQ15847 76 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 DEFB114Q30KQ6 69 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 C18orf32Q8TCD1 76 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 LEAP2Q969E1 77 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 PREX2Q70Z35 1606 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 WDFY4Q6ZS81 3184 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 ABCA8O94911 1581 aa-0.87□□□□□ -2.55
FOXN3-216ENST00000557496 ABCC1P33527 1531 aa-0.88□□□□□ -2.55
FOXN3-216ENST00000557496 MADDQ8WXG6 1647 aa-0.88□□□□□ -2.55
FOXN3-216ENST00000557496 HILPDAQ9Y5L2 63 aa-0.88□□□□□ -2.55
FOXN3-216ENST00000557496 ALS2Q96Q42 1657 aa-0.88□□□□□ -2.55
FOXN3-216ENST00000557496 IQGAP3Q86VI3 1631 aa-0.89□□□□□ -2.55
FOXN3-216ENST00000557496 ABCA9Q8IUA7 1624 aa-0.89□□□□□ -2.55
FOXN3-216ENST00000557496 CEP250Q9BV73 2442 aa-0.89□□□□□ -2.55
FOXN3-216ENST00000557496 MT1FP04733 61 aa-0.89□□□□□ -2.55
FOXN3-216ENST00000557496 DEFB136Q30KP8 78 aa-0.89□□□□□ -2.55
FOXN3-216ENST00000557496 DNAH14Q0VDD8 3507 aa-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 WFDC10BQ8IUB3 73 aa-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 LINC00308Q8TCZ7 52 aa-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 S100A13Q99584 98 aa-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 RRBP1Q9P2E9 1410 aaKnown RBP-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 USP34Q70CQ2 3546 aa-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 MUC3AQ02505 3323 aa-0.9□□□□□ -2.55
FOXN3-216ENST00000557496 DNAH12Q6ZR08 3092 aa-0.91□□□□□ -2.55
FOXN3-216ENST00000557496 K7EMI3 77 aa-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 M0R1W7 72 aa-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 POLR2KP53803 58 aaKnown RBP-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 RPS29P62273 56 aaKnown RBP-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 ATXN8Q156A1 80 aa-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 ABRACLQ9P1F3 81 aa-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 ANKARQ7Z5J8 1434 aa-0.91□□□□□ -2.56
FOXN3-216ENST00000557496 EP400Q96L91 3159 aa-0.92□□□□□ -2.56
FOXN3-216ENST00000557496 SMIM27A0A1W2PRY6 76 aa-0.92□□□□□ -2.56
FOXN3-216ENST00000557496 MKI67P46013 3256 aaKnown RBP-0.92□□□□□ -2.56
FOXN3-216ENST00000557496 EFCAB6Q5THR3 1501 aa-0.93□□□□□ -2.56
FOXN3-216ENST00000557496 LINC01549A6NIU2 74 aa-0.93□□□□□ -2.56
FOXN3-216ENST00000557496 CFAP47Q6ZTR5 3102 aa-0.93□□□□□ -2.56
FOXN3-216ENST00000557496 EEA1Q15075 1411 aa-0.94□□□□□ -2.56
FOXN3-216ENST00000557496 GNG2P59768 71 aa-0.94□□□□□ -2.56
FOXN3-216ENST00000557496 LMO7Q8WWI1 1683 aa-0.94□□□□□ -2.56
FOXN3-216ENST00000557496 UNC80Q8N2C7 3258 aa-0.95□□□□□ -2.56
FOXN3-216ENST00000557496 ABCA6Q8N139 1617 aa-0.95□□□□□ -2.56
FOXN3-216ENST00000557496 IGIPA6NJ69 53 aa-0.95□□□□□ -2.56
FOXN3-216ENST00000557496 TMEM167BQ9NRX6 74 aa-0.95□□□□□ -2.56
FOXN3-216ENST00000557496 GNG13Q9P2W3 67 aa-0.95□□□□□ -2.56
FOXN3-216ENST00000557496 UGGT2Q9NYU1 1516 aa-0.95□□□□□ -2.56
FOXN3-216ENST00000557496 CCDC18Q5T9S5 1454 aa-0.96□□□□□ -2.56
FOXN3-216ENST00000557496 TFF3Q07654 80 aa-0.97□□□□□ -2.56
FOXN3-216ENST00000557496 RB1CC1Q8TDY2 1594 aa-0.97□□□□□ -2.56
FOXN3-216ENST00000557496 LOC400499M0QZD8 3231 aa-0.97□□□□□ -2.57
FOXN3-216ENST00000557496 XIRP2A4UGR9 3374 aa-0.97□□□□□ -2.57
FOXN3-216ENST00000557496 SYCP2Q9BX26 1530 aa-0.98□□□□□ -2.57
FOXN3-216ENST00000557496 MROH2AA6NES4 1674 aa-0.98□□□□□ -2.57
FOXN3-216ENST00000557496 DUOX2Q9NRD8 1548 aa-0.99□□□□□ -2.57
FOXN3-216ENST00000557496 CCDC180Q9P1Z9 1646 aa-0.99□□□□□ -2.57
FOXN3-216ENST00000557496 DEFB131AP59861 70 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms