RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 K7ERS5 55 aa1.48□□□□□ -2.17
VRK1-207ENST00000557352 ATOX1O00244 68 aa1.48□□□□□ -2.17
VRK1-207ENST00000557352 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
VRK1-207ENST00000557352 RYR1P21817 5038 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 FAM236AA0A1B0GUQ0 79 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 FAM236BA0A1B0GV22 79 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 C8orf87E5RJ46 101 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 NDUFB1O75438 58 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 HAMPP81172 84 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 Q5VSD8 79 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 TNXBP22105 4242 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 FAT1Q14517 4588 aa1.47□□□□□ -2.17
VRK1-207ENST00000557352 IGKV3D-7A0A0C4DH55 119 aa1.46□□□□□ -2.18
VRK1-207ENST00000557352 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
VRK1-207ENST00000557352 K7EQZ3 153 aa1.46□□□□□ -2.18
VRK1-207ENST00000557352 SMR3BP02814 79 aaPredicted RBP1.46□□□□□ -2.18
VRK1-207ENST00000557352 SERP2Q8N6R1 65 aa1.46□□□□□ -2.18
VRK1-207ENST00000557352 V9GYY9 64 aa1.46□□□□□ -2.18
VRK1-207ENST00000557352 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 TRAV7A0A075B6U4 112 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 A0A087WVE0 104 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 A0A0G2JQZ4 141 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 MMP24-AS1A0A0U1RRL7 71 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 UQCRQO14949 82 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 C1orf195Q5TG92 126 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 FP248Q71RG6 208 aaPredicted RBP1.45□□□□□ -2.18
VRK1-207ENST00000557352 TMEM254Q8TBM7 123 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 ANAPC13Q9BS18 74 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 TP53AIP1Q9HCN2 124 aa1.45□□□□□ -2.18
VRK1-207ENST00000557352 hDV103S1A0JD37 113 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 H3BPC8 53 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 MT1HL1P0DM35 61 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 COX7CP15954 63 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 KLKP1Q107X0 134 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 CASC2Q6XLA1 102 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 FAT3Q8TDW7 4589 aa1.44□□□□□ -2.18
VRK1-207ENST00000557352 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
VRK1-207ENST00000557352 MYCBP2O75592 4640 aa1.43□□□□□ -2.18
VRK1-207ENST00000557352 NDUFC1O43677 76 aa1.43□□□□□ -2.18
VRK1-207ENST00000557352 LINC00313P59037 77 aa1.43□□□□□ -2.18
VRK1-207ENST00000557352 HRCT1Q6UXD1 115 aa1.43□□□□□ -2.18
VRK1-207ENST00000557352 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
VRK1-207ENST00000557352 EPPK1P58107 5090 aaKnown RBP1.43□□□□□ -2.18
VRK1-207ENST00000557352 TRAV22A0A0B4J277 110 aa1.42□□□□□ -2.18
VRK1-207ENST00000557352 C20orf166-AS1Q96NR2 134 aa1.42□□□□□ -2.18
VRK1-207ENST00000557352 MP68P56378 58 aa1.41□□□□□ -2.18
VRK1-207ENST00000557352 ATP5EP56381 51 aaPredicted RBP1.41□□□□□ -2.18
VRK1-207ENST00000557352 TPRXLQ17RH7 258 aa1.41□□□□□ -2.18
VRK1-207ENST00000557352 KRTAP25-1Q3LHN0 102 aa1.41□□□□□ -2.18
VRK1-207ENST00000557352 LOC101927531A0A1B0GV80 90 aa1.4□□□□□ -2.19
VRK1-207ENST00000557352 CCDC179H3BU77 68 aa1.4□□□□□ -2.19
VRK1-207ENST00000557352 H7BZZ5 65 aa1.4□□□□□ -2.19
VRK1-207ENST00000557352 TMEM258P61165 79 aa1.4□□□□□ -2.19
VRK1-207ENST00000557352 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.19
VRK1-207ENST00000557352 BIRC6Q9NR09 4857 aa1.4□□□□□ -2.19
VRK1-207ENST00000557352 H0Y9P7 68 aa1.39□□□□□ -2.19
VRK1-207ENST00000557352 C20orf197Q8N268 126 aa1.39□□□□□ -2.19
VRK1-207ENST00000557352 HERC2O95714 4834 aa1.38□□□□□ -2.19
VRK1-207ENST00000557352 CYP4F30PQ9H0H9 118 aa1.38□□□□□ -2.19
VRK1-207ENST00000557352 ABCA13Q86UQ4 5058 aa1.38□□□□□ -2.19
VRK1-207ENST00000557352 A6NED7 52 aa1.37□□□□□ -2.19
VRK1-207ENST00000557352 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
VRK1-207ENST00000557352 RPS28P62857 69 aaKnown RBP1.37□□□□□ -2.19
VRK1-207ENST00000557352 C7orf65Q6ZTY9 151 aa1.37□□□□□ -2.19
VRK1-207ENST00000557352 LINC00208Q96KT6 92 aa1.37□□□□□ -2.19
VRK1-207ENST00000557352 CYSTM1Q9H1C7 97 aa1.37□□□□□ -2.19
VRK1-207ENST00000557352 FAM236DA0A1B0GTK5 79 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 A0A1B0GU33 70 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 A8MUN3 132 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 FAM236CP0DP71 79 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 RETNLBQ9BQ08 111 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 RBM12B-AS1Q9P1G2 102 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 SNURFQ9Y675 71 aa1.36□□□□□ -2.19
VRK1-207ENST00000557352 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
VRK1-207ENST00000557352 ATP11AUNQ6ZP68 121 aa1.35□□□□□ -2.19
VRK1-207ENST00000557352 DMAC1Q96GE9 116 aa1.35□□□□□ -2.19
VRK1-207ENST00000557352 SERP1Q9Y6X1 66 aa1.35□□□□□ -2.19
VRK1-207ENST00000557352 PCLOQ9Y6V0 5065 aa1.35□□□□□ -2.19
VRK1-207ENST00000557352 LRP2P98164 4655 aa1.34□□□□□ -2.2
VRK1-207ENST00000557352 ACYP2P14621 99 aa1.33□□□□□ -2.2
VRK1-207ENST00000557352 SPINK7P58062 85 aa1.33□□□□□ -2.2
VRK1-207ENST00000557352 PCOTHQ58A44 107 aa1.32□□□□□ -2.2
VRK1-207ENST00000557352 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
VRK1-207ENST00000557352 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
VRK1-207ENST00000557352 Q1T7F1 81 aa1.3□□□□□ -2.2
VRK1-207ENST00000557352 COA5Q86WW8 74 aa1.3□□□□□ -2.2
VRK1-207ENST00000557352 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
VRK1-207ENST00000557352 LPAP08519 4548 aa1.3□□□□□ -2.2
VRK1-207ENST00000557352 MUC17Q685J3 4493 aa1.29□□□□□ -2.2
VRK1-207ENST00000557352 C4orf26Q17RF5 130 aa1.29□□□□□ -2.2
VRK1-207ENST00000557352 HERC1Q15751 4861 aa1.29□□□□□ -2.2
VRK1-207ENST00000557352 KRTAP19-2Q3LHN2 52 aa1.28□□□□□ -2.2
VRK1-207ENST00000557352 H1FX-AS1Q4G0G2 97 aa1.28□□□□□ -2.2
VRK1-207ENST00000557352 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
VRK1-207ENST00000557352 HMCN2Q8NDA2 5059 aa1.28□□□□□ -2.21
VRK1-207ENST00000557352 H0YAA0 97 aa1.27□□□□□ -2.21
VRK1-207ENST00000557352 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
VRK1-207ENST00000557352 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
VRK1-207ENST00000557352 PRR15LQ9BU68 103 aa1.26□□□□□ -2.21
VRK1-207ENST00000557352 S4R3F8 94 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms