RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 H1FX-AS1Q4G0G2 97 aa6.98□□□□□ -1.29
SNX6-206ENST00000556162 NDUFC1O43677 76 aa6.98□□□□□ -1.29
SNX6-206ENST00000556162 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
SNX6-206ENST00000556162 H3BPC8 53 aa6.95□□□□□ -1.3
SNX6-206ENST00000556162 H3BS24 57 aa6.95□□□□□ -1.3
SNX6-206ENST00000556162 H7BZZ5 65 aa6.95□□□□□ -1.3
SNX6-206ENST00000556162 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
SNX6-206ENST00000556162 ATP5EP56381 51 aaPredicted RBP6.92□□□□□ -1.3
SNX6-206ENST00000556162 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
SNX6-206ENST00000556162 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
SNX6-206ENST00000556162 S4R3F8 94 aa6.82□□□□□ -1.32
SNX6-206ENST00000556162 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
SNX6-206ENST00000556162 A8MUN3 132 aa6.79□□□□□ -1.32
SNX6-206ENST00000556162 LCA10Q71F78 164 aa6.77□□□□□ -1.33
SNX6-206ENST00000556162 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
SNX6-206ENST00000556162 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
SNX6-206ENST00000556162 MT2AP02795 61 aa6.74□□□□□ -1.33
SNX6-206ENST00000556162 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
SNX6-206ENST00000556162 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
SNX6-206ENST00000556162 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
SNX6-206ENST00000556162 MT1FP04733 61 aa6.68□□□□□ -1.34
SNX6-206ENST00000556162 ACYP2P14621 99 aa6.63□□□□□ -1.35
SNX6-206ENST00000556162 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
SNX6-206ENST00000556162 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
SNX6-206ENST00000556162 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
SNX6-206ENST00000556162 Q1T7F1 81 aa6.53□□□□□ -1.36
SNX6-206ENST00000556162 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
SNX6-206ENST00000556162 V9GYY9 64 aa6.51□□□□□ -1.37
SNX6-206ENST00000556162 USH2AO75445 5202 aa6.51□□□□□ -1.37
SNX6-206ENST00000556162 H0YAA0 97 aa6.51□□□□□ -1.37
SNX6-206ENST00000556162 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
SNX6-206ENST00000556162 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
SNX6-206ENST00000556162 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
SNX6-206ENST00000556162 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
SNX6-206ENST00000556162 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
SNX6-206ENST00000556162 COA5Q86WW8 74 aa6.43□□□□□ -1.38
SNX6-206ENST00000556162 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
SNX6-206ENST00000556162 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
SNX6-206ENST00000556162 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
SNX6-206ENST00000556162 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
SNX6-206ENST00000556162 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
SNX6-206ENST00000556162 PSPHP1O15172 72 aa6.38□□□□□ -1.39
SNX6-206ENST00000556162 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SNX6-206ENST00000556162 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
SNX6-206ENST00000556162 P0C880 135 aa6.34□□□□□ -1.39
SNX6-206ENST00000556162 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
SNX6-206ENST00000556162 Q5VV11 94 aa6.32□□□□□ -1.4
SNX6-206ENST00000556162 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
SNX6-206ENST00000556162 R4GN34 69 aa6.28□□□□□ -1.4
SNX6-206ENST00000556162 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
SNX6-206ENST00000556162 M0QZ58 72 aa6.24□□□□□ -1.41
SNX6-206ENST00000556162 MT1BP07438 61 aa6.22□□□□□ -1.41
SNX6-206ENST00000556162 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
SNX6-206ENST00000556162 SEC61GP60059 68 aa6.22□□□□□ -1.41
SNX6-206ENST00000556162 A6NED7 52 aa6.21□□□□□ -1.42
SNX6-206ENST00000556162 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
SNX6-206ENST00000556162 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
SNX6-206ENST00000556162 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
SNX6-206ENST00000556162 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
SNX6-206ENST00000556162 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
SNX6-206ENST00000556162 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
SNX6-206ENST00000556162 A0A1B0GU69 56 aa6.1□□□□□ -1.43
SNX6-206ENST00000556162 A8MU10 97 aa6.1□□□□□ -1.43
SNX6-206ENST00000556162 PMAIP1Q13794 54 aa6.09□□□□□ -1.44
SNX6-206ENST00000556162 A0A1B0GU33 70 aa6.06□□□□□ -1.44
SNX6-206ENST00000556162 A6NN06 94 aa6.06□□□□□ -1.44
SNX6-206ENST00000556162 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
SNX6-206ENST00000556162 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
SNX6-206ENST00000556162 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
SNX6-206ENST00000556162 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
SNX6-206ENST00000556162 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
SNX6-206ENST00000556162 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
SNX6-206ENST00000556162 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
SNX6-206ENST00000556162 UQCR11O14957 56 aa5.97□□□□□ -1.45
SNX6-206ENST00000556162 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
SNX6-206ENST00000556162 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
SNX6-206ENST00000556162 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
SNX6-206ENST00000556162 A0A0D9SG42 100 aa5.93□□□□□ -1.46
SNX6-206ENST00000556162 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
SNX6-206ENST00000556162 MT1XP80297 61 aa5.92□□□□□ -1.46
SNX6-206ENST00000556162 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
SNX6-206ENST00000556162 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
SNX6-206ENST00000556162 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
SNX6-206ENST00000556162 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
SNX6-206ENST00000556162 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
SNX6-206ENST00000556162 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
SNX6-206ENST00000556162 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
SNX6-206ENST00000556162 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
SNX6-206ENST00000556162 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
SNX6-206ENST00000556162 KMT2DO14686 5537 aa5.71□□□□□ -1.5
SNX6-206ENST00000556162 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
SNX6-206ENST00000556162 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
SNX6-206ENST00000556162 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
SNX6-206ENST00000556162 K7ERS5 55 aa5.64□□□□□ -1.51
SNX6-206ENST00000556162 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
SNX6-206ENST00000556162 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
SNX6-206ENST00000556162 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
SNX6-206ENST00000556162 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
SNX6-206ENST00000556162 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
SNX6-206ENST00000556162 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms