RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 C5orf47Q569G3 176 aa8.23□□□□□ -1.09
NPC2-208ENST00000556009 SMIM20Q8N5G0 67 aa8.23□□□□□ -1.09
NPC2-208ENST00000556009 MP68P56378 58 aa8.22□□□□□ -1.09
NPC2-208ENST00000556009 CYP4F30PQ9H0H9 118 aa8.22□□□□□ -1.09
NPC2-208ENST00000556009 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
NPC2-208ENST00000556009 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
NPC2-208ENST00000556009 LINC00208Q96KT6 92 aa8.21□□□□□ -1.1
NPC2-208ENST00000556009 NEBP20929 6669 aa8.19□□□□□ -1.1
NPC2-208ENST00000556009 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
NPC2-208ENST00000556009 H3BPC8 53 aa8.16□□□□□ -1.1
NPC2-208ENST00000556009 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
NPC2-208ENST00000556009 KLKP1Q107X0 134 aa8.09□□□□□ -1.11
NPC2-208ENST00000556009 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
NPC2-208ENST00000556009 A6NN06 94 aa8.02□□□□□ -1.13
NPC2-208ENST00000556009 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
NPC2-208ENST00000556009 MT1BP07438 61 aa8.01□□□□□ -1.13
NPC2-208ENST00000556009 C20orf197Q8N268 126 aa8□□□□□ -1.13
NPC2-208ENST00000556009 SNURFQ9Y675 71 aa8□□□□□ -1.13
NPC2-208ENST00000556009 COX7CP15954 63 aa7.99□□□□□ -1.13
NPC2-208ENST00000556009 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
NPC2-208ENST00000556009 KRTAP19-8Q3LI54 63 aa7.98□□□□□ -1.13
NPC2-208ENST00000556009 Q5VV11 94 aa7.98□□□□□ -1.13
NPC2-208ENST00000556009 CSAG1Q6PB30 78 aa7.98□□□□□ -1.13
NPC2-208ENST00000556009 ANAPC13Q9BS18 74 aa7.96□□□□□ -1.14
NPC2-208ENST00000556009 S4R3F8 94 aa7.96□□□□□ -1.14
NPC2-208ENST00000556009 A8MUN3 132 aa7.92□□□□□ -1.14
NPC2-208ENST00000556009 LCA10Q71F78 164 aa7.91□□□□□ -1.14
NPC2-208ENST00000556009 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
NPC2-208ENST00000556009 DMAC1Q96GE9 116 aa7.86□□□□□ -1.15
NPC2-208ENST00000556009 KRTAP5-9P26371 169 aa7.81□□□□□ -1.16
NPC2-208ENST00000556009 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
NPC2-208ENST00000556009 KMT2DO14686 5537 aa7.8□□□□□ -1.16
NPC2-208ENST00000556009 KRTAP20-1Q3LI63 56 aa7.8□□□□□ -1.16
NPC2-208ENST00000556009 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
NPC2-208ENST00000556009 CCDC179H3BU77 68 aa7.79□□□□□ -1.16
NPC2-208ENST00000556009 NDUFC1O43677 76 aa7.79□□□□□ -1.16
NPC2-208ENST00000556009 MDN1Q9NU22 5596 aa7.78□□□□□ -1.16
NPC2-208ENST00000556009 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
NPC2-208ENST00000556009 H7BZZ5 65 aa7.76□□□□□ -1.17
NPC2-208ENST00000556009 ACYP2P14621 99 aa7.76□□□□□ -1.17
NPC2-208ENST00000556009 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
NPC2-208ENST00000556009 H0YAA0 97 aa7.6□□□□□ -1.19
NPC2-208ENST00000556009 COA5Q86WW8 74 aa7.58□□□□□ -1.2
NPC2-208ENST00000556009 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
NPC2-208ENST00000556009 KRTAP2-3P0C7H8 128 aa7.54□□□□□ -1.2
NPC2-208ENST00000556009 KRTAP2-4Q9BYR9 128 aa7.54□□□□□ -1.2
NPC2-208ENST00000556009 ATP5EP56381 51 aaPredicted RBP7.52□□□□□ -1.21
NPC2-208ENST00000556009 TMEM258P61165 79 aa7.51□□□□□ -1.21
NPC2-208ENST00000556009 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
NPC2-208ENST00000556009 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
NPC2-208ENST00000556009 PCP4P48539 62 aa7.47□□□□□ -1.21
NPC2-208ENST00000556009 SPRR2FQ96RM1 72 aa7.47□□□□□ -1.21
NPC2-208ENST00000556009 MT1XP80297 61 aa7.44□□□□□ -1.22
NPC2-208ENST00000556009 SPRR2EP22531 72 aa7.43□□□□□ -1.22
NPC2-208ENST00000556009 SPRR2BP35325 72 aa7.43□□□□□ -1.22
NPC2-208ENST00000556009 SPRR2AP35326 72 aa7.43□□□□□ -1.22
NPC2-208ENST00000556009 P0C880 135 aa7.39□□□□□ -1.23
NPC2-208ENST00000556009 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
NPC2-208ENST00000556009 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
NPC2-208ENST00000556009 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
NPC2-208ENST00000556009 LCE1AQ5T7P2 110 aa7.31□□□□□ -1.24
NPC2-208ENST00000556009 R4GN34 69 aa7.29□□□□□ -1.24
NPC2-208ENST00000556009 KRTAP2-2Q9BYT5 123 aa7.28□□□□□ -1.24
NPC2-208ENST00000556009 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
NPC2-208ENST00000556009 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
NPC2-208ENST00000556009 SEC61GP60059 68 aa7.26□□□□□ -1.25
NPC2-208ENST00000556009 M0QZ58 72 aa7.23□□□□□ -1.25
NPC2-208ENST00000556009 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
NPC2-208ENST00000556009 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
NPC2-208ENST00000556009 A0A1B0GU69 56 aa7.18□□□□□ -1.26
NPC2-208ENST00000556009 SPRR2DP22532 72 aa7.18□□□□□ -1.26
NPC2-208ENST00000556009 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
NPC2-208ENST00000556009 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
NPC2-208ENST00000556009 A0A1B0GU33 70 aa7.1□□□□□ -1.27
NPC2-208ENST00000556009 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
NPC2-208ENST00000556009 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
NPC2-208ENST00000556009 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
NPC2-208ENST00000556009 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
NPC2-208ENST00000556009 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
NPC2-208ENST00000556009 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
NPC2-208ENST00000556009 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
NPC2-208ENST00000556009 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
NPC2-208ENST00000556009 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
NPC2-208ENST00000556009 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
NPC2-208ENST00000556009 V9GYY9 64 aa7.01□□□□□ -1.29
NPC2-208ENST00000556009 Q1T7F1 81 aa6.99□□□□□ -1.29
NPC2-208ENST00000556009 A0A0D9SG42 100 aa6.94□□□□□ -1.3
NPC2-208ENST00000556009 PSPHP1O15172 72 aa6.91□□□□□ -1.3
NPC2-208ENST00000556009 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
NPC2-208ENST00000556009 UQCR11O14957 56 aa6.87□□□□□ -1.31
NPC2-208ENST00000556009 GPR98Q8WXG9 6306 aa6.85□□□□□ -1.31
NPC2-208ENST00000556009 A8MU10 97 aa6.85□□□□□ -1.31
NPC2-208ENST00000556009 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
NPC2-208ENST00000556009 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
NPC2-208ENST00000556009 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
NPC2-208ENST00000556009 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
NPC2-208ENST00000556009 A6NED7 52 aa6.7□□□□□ -1.34
NPC2-208ENST00000556009 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
NPC2-208ENST00000556009 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
NPC2-208ENST00000556009 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms