RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 COL7A1Q02388 2944 aa1.77□□□□□ -2.13
GPHN-210ENST00000555668 CFAP46Q8IYW2 2715 aa1.76□□□□□ -2.13
GPHN-210ENST00000555668 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
GPHN-210ENST00000555668 CSMD3Q7Z407 3707 aa1.75□□□□□ -2.13
GPHN-210ENST00000555668 DNAH11Q96DT5 4516 aa1.75□□□□□ -2.13
GPHN-210ENST00000555668 ANKRD11Q6UB99 2663 aaPredicted RBP1.75□□□□□ -2.13
GPHN-210ENST00000555668 NBEAL1Q6ZS30 2694 aa1.75□□□□□ -2.13
GPHN-210ENST00000555668 ANK2Q01484 3957 aa1.75□□□□□ -2.13
GPHN-210ENST00000555668 EYSQ5T1H1 3165 aa1.74□□□□□ -2.13
GPHN-210ENST00000555668 PDZD2O15018 2839 aa1.74□□□□□ -2.13
GPHN-210ENST00000555668 TNP1P09430 55 aa1.74□□□□□ -2.13
GPHN-210ENST00000555668 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
GPHN-210ENST00000555668 ANK3Q12955 4377 aaKnown RBP1.74□□□□□ -2.13
GPHN-210ENST00000555668 VPS13CQ709C8 3753 aa1.73□□□□□ -2.13
GPHN-210ENST00000555668 LYSTQ99698 3801 aa1.73□□□□□ -2.13
GPHN-210ENST00000555668 HIVEP1P15822 2718 aa1.73□□□□□ -2.13
GPHN-210ENST00000555668 MXRA5Q9NR99 2828 aa1.72□□□□□ -2.13
GPHN-210ENST00000555668 SMR3AQ99954 134 aa1.72□□□□□ -2.13
GPHN-210ENST00000555668 USP9YO00507 2555 aaPredicted RBP1.72□□□□□ -2.13
GPHN-210ENST00000555668 EPG5Q9HCE0 2579 aa1.72□□□□□ -2.13
GPHN-210ENST00000555668 CACNA1AO00555 2505 aa1.72□□□□□ -2.13
GPHN-210ENST00000555668 MUC3AQ02505 3323 aa1.71□□□□□ -2.14
GPHN-210ENST00000555668 ZNF292O60281 2723 aa1.71□□□□□ -2.14
GPHN-210ENST00000555668 C9orf92A6NGG3 77 aa1.71□□□□□ -2.14
GPHN-210ENST00000555668 CUBNO60494 3623 aa1.7□□□□□ -2.14
GPHN-210ENST00000555668 CMYA5Q8N3K9 4069 aa1.7□□□□□ -2.14
GPHN-210ENST00000555668 DNAH8Q96JB1 4490 aa1.7□□□□□ -2.14
GPHN-210ENST00000555668 SVEP1Q4LDE5 3571 aa1.69□□□□□ -2.14
GPHN-210ENST00000555668 CSMD2Q7Z408 3487 aa1.69□□□□□ -2.14
GPHN-210ENST00000555668 DYNC2H1Q8NCM8 4307 aaKnown RBP1.69□□□□□ -2.14
GPHN-210ENST00000555668 ACANP16112 2415 aa1.69□□□□□ -2.14
GPHN-210ENST00000555668 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
GPHN-210ENST00000555668 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
GPHN-210ENST00000555668 FASNP49327 2511 aaKnown RBP1.68□□□□□ -2.14
GPHN-210ENST00000555668 BDP1A6H8Y1 2624 aa1.68□□□□□ -2.14
GPHN-210ENST00000555668 TEP1Q99973 2627 aaKnown RBP1.68□□□□□ -2.14
GPHN-210ENST00000555668 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
GPHN-210ENST00000555668 DNAH6Q9C0G6 4158 aa1.68□□□□□ -2.14
GPHN-210ENST00000555668 ABCA12Q86UK0 2595 aa1.68□□□□□ -2.14
GPHN-210ENST00000555668 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
GPHN-210ENST00000555668 ITPR2Q14571 2701 aa1.67□□□□□ -2.14
GPHN-210ENST00000555668 NOTCH1P46531 2555 aa1.67□□□□□ -2.14
GPHN-210ENST00000555668 STAB2Q8WWQ8 2551 aa1.67□□□□□ -2.14
GPHN-210ENST00000555668 MYCBP2O75592 4640 aa1.67□□□□□ -2.14
GPHN-210ENST00000555668 DNAH10Q8IVF4 4471 aa1.66□□□□□ -2.14
GPHN-210ENST00000555668 PKD1L1Q8TDX9 2849 aa1.66□□□□□ -2.14
GPHN-210ENST00000555668 DNAH3Q8TD57 4116 aa1.66□□□□□ -2.14
GPHN-210ENST00000555668 FBN2P35556 2912 aa1.66□□□□□ -2.14
GPHN-210ENST00000555668 USP24Q9UPU5 2620 aa1.65□□□□□ -2.15
GPHN-210ENST00000555668 ACACBO00763 2458 aa1.65□□□□□ -2.15
GPHN-210ENST00000555668 ATRQ13535 2644 aa1.65□□□□□ -2.15
GPHN-210ENST00000555668 HECTD4Q9Y4D8 3996 aa1.65□□□□□ -2.15
GPHN-210ENST00000555668 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
GPHN-210ENST00000555668 DNAH2Q9P225 4427 aa1.64□□□□□ -2.15
GPHN-210ENST00000555668 DNAH9Q9NYC9 4486 aa1.64□□□□□ -2.15
GPHN-210ENST00000555668 HUWE1Q7Z6Z7 4374 aaKnown RBP1.63□□□□□ -2.15
GPHN-210ENST00000555668 MYO18BQ8IUG5 2567 aa1.61□□□□□ -2.15
GPHN-210ENST00000555668 ZANQ9Y493 2812 aa1.61□□□□□ -2.15
GPHN-210ENST00000555668 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
GPHN-210ENST00000555668 POLQO75417 2590 aa1.6□□□□□ -2.15
GPHN-210ENST00000555668 KMT2AQ03164 3969 aa1.59□□□□□ -2.15
GPHN-210ENST00000555668 FLNAP21333 2647 aaKnown RBP1.59□□□□□ -2.15
GPHN-210ENST00000555668 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.15
GPHN-210ENST00000555668 TENM3Q9P273 2699 aa1.59□□□□□ -2.15
GPHN-210ENST00000555668 SACSQ9NZJ4 4579 aa1.58□□□□□ -2.16
GPHN-210ENST00000555668 FLGP20930 4061 aaPredicted RBP1.58□□□□□ -2.16
GPHN-210ENST00000555668 FLNCQ14315 2725 aa1.57□□□□□ -2.16
GPHN-210ENST00000555668 VPS13BQ7Z7G8 4022 aa1.55□□□□□ -2.16
GPHN-210ENST00000555668 PKD1P98161 4303 aa1.55□□□□□ -2.16
GPHN-210ENST00000555668 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
GPHN-210ENST00000555668 MAST4O15021 2626 aa1.54□□□□□ -2.16
GPHN-210ENST00000555668 IGSF10Q6WRI0 2623 aa1.54□□□□□ -2.16
GPHN-210ENST00000555668 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
GPHN-210ENST00000555668 STAB1Q9NY15 2570 aa1.53□□□□□ -2.16
GPHN-210ENST00000555668 ZNF469Q96JG9 3925 aaPredicted RBP1.53□□□□□ -2.16
GPHN-210ENST00000555668 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
GPHN-210ENST00000555668 HSPG2P98160 4391 aa1.51□□□□□ -2.17
GPHN-210ENST00000555668 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
GPHN-210ENST00000555668 DNAH5Q8TE73 4624 aa1.5□□□□□ -2.17
GPHN-210ENST00000555668 M0R2T5 61 aa1.48□□□□□ -2.17
GPHN-210ENST00000555668 KRTAP2-3P0C7H8 128 aa1.48□□□□□ -2.17
GPHN-210ENST00000555668 KRTAP2-4Q9BYR9 128 aa1.48□□□□□ -2.17
GPHN-210ENST00000555668 KRTAP2-1Q9BYU5 128 aa1.48□□□□□ -2.17
GPHN-210ENST00000555668 FLNBO75369 2602 aaKnown RBP1.48□□□□□ -2.17
GPHN-210ENST00000555668 TENM1Q9UKZ4 2725 aa1.47□□□□□ -2.17
GPHN-210ENST00000555668 LRP1Q07954 4544 aaKnown RBP1.47□□□□□ -2.17
GPHN-210ENST00000555668 PKHD1L1Q86WI1 4243 aa1.47□□□□□ -2.17
GPHN-210ENST00000555668 FAT2Q9NYQ8 4349 aa1.47□□□□□ -2.17
GPHN-210ENST00000555668 TNXBP22105 4242 aa1.47□□□□□ -2.17
GPHN-210ENST00000555668 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
GPHN-210ENST00000555668 FAT3Q8TDW7 4589 aa1.45□□□□□ -2.18
GPHN-210ENST00000555668 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
GPHN-210ENST00000555668 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
GPHN-210ENST00000555668 KRTAP10-4P60372 401 aaPredicted RBP1.44□□□□□ -2.18
GPHN-210ENST00000555668 STARD9Q9P2P6 4700 aa1.43□□□□□ -2.18
GPHN-210ENST00000555668 PLECQ15149 4684 aaKnown RBP1.41□□□□□ -2.18
GPHN-210ENST00000555668 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
GPHN-210ENST00000555668 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
GPHN-210ENST00000555668 DYNC1H1Q14204 4646 aaKnown RBP1.4□□□□□ -2.19
GPHN-210ENST00000555668 SMR3BP02814 79 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms