RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C5orf47Q569G3 176 aa6.37□□□□□ -1.39
SNX6-203ENST00000555416 TRAV22A0A0B4J277 110 aa6.35□□□□□ -1.39
SNX6-203ENST00000555416 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
SNX6-203ENST00000555416 LCA10Q71F78 164 aa6.34□□□□□ -1.39
SNX6-203ENST00000555416 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
SNX6-203ENST00000555416 S4R3F8 94 aa6.34□□□□□ -1.39
SNX6-203ENST00000555416 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.4
SNX6-203ENST00000555416 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
SNX6-203ENST00000555416 UQCRQO14949 82 aa6.3□□□□□ -1.4
SNX6-203ENST00000555416 H0Y9P7 68 aa6.29□□□□□ -1.4
SNX6-203ENST00000555416 CSAG1Q6PB30 78 aa6.27□□□□□ -1.41
SNX6-203ENST00000555416 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
SNX6-203ENST00000555416 OCR1Q9BZK8 76 aa6.23□□□□□ -1.41
SNX6-203ENST00000555416 ATOX1O00244 68 aa6.22□□□□□ -1.41
SNX6-203ENST00000555416 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
SNX6-203ENST00000555416 FAM236BA0A1B0GV22 79 aa6.21□□□□□ -1.42
SNX6-203ENST00000555416 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
SNX6-203ENST00000555416 KLKP1Q107X0 134 aa6.2□□□□□ -1.42
SNX6-203ENST00000555416 LINC00208Q96KT6 92 aa6.2□□□□□ -1.42
SNX6-203ENST00000555416 J3QR89 54 aa6.17□□□□□ -1.42
SNX6-203ENST00000555416 MT1BP07438 61 aa6.15□□□□□ -1.42
SNX6-203ENST00000555416 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
SNX6-203ENST00000555416 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
SNX6-203ENST00000555416 KRTAP5-3Q6L8H2 238 aa6.12□□□□□ -1.43
SNX6-203ENST00000555416 MP68P56378 58 aa6.11□□□□□ -1.43
SNX6-203ENST00000555416 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
SNX6-203ENST00000555416 NDUFC1O43677 76 aa6.08□□□□□ -1.44
SNX6-203ENST00000555416 MT-ATP8P03928 68 aa6.08□□□□□ -1.44
SNX6-203ENST00000555416 A8MUN3 132 aa6.07□□□□□ -1.44
SNX6-203ENST00000555416 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
SNX6-203ENST00000555416 SCGB1A1P11684 91 aa6.06□□□□□ -1.44
SNX6-203ENST00000555416 Q5VV11 94 aa6.06□□□□□ -1.44
SNX6-203ENST00000555416 H3BPC8 53 aa6.04□□□□□ -1.44
SNX6-203ENST00000555416 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
SNX6-203ENST00000555416 H0YAA0 97 aa6.02□□□□□ -1.45
SNX6-203ENST00000555416 K7ERU9 68 aa6□□□□□ -1.45
SNX6-203ENST00000555416 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
SNX6-203ENST00000555416 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
SNX6-203ENST00000555416 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
SNX6-203ENST00000555416 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
SNX6-203ENST00000555416 A6NN06 94 aa5.97□□□□□ -1.45
SNX6-203ENST00000555416 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
SNX6-203ENST00000555416 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
SNX6-203ENST00000555416 P0C880 135 aa5.92□□□□□ -1.46
SNX6-203ENST00000555416 KRTAP6-3Q3LI67 103 aa5.88□□□□□ -1.47
SNX6-203ENST00000555416 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
SNX6-203ENST00000555416 SNURFQ9Y675 71 aa5.85□□□□□ -1.47
SNX6-203ENST00000555416 ACYP2P14621 99 aa5.81□□□□□ -1.48
SNX6-203ENST00000555416 R4GN34 69 aa5.79□□□□□ -1.48
SNX6-203ENST00000555416 M0QZ58 72 aa5.78□□□□□ -1.48
SNX6-203ENST00000555416 MT1XP80297 61 aa5.77□□□□□ -1.49
SNX6-203ENST00000555416 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
SNX6-203ENST00000555416 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
SNX6-203ENST00000555416 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
SNX6-203ENST00000555416 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
SNX6-203ENST00000555416 CHKB-CPT1BH3BT56 60 aa5.7□□□□□ -1.5
SNX6-203ENST00000555416 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
SNX6-203ENST00000555416 SPTSSBQ8NFR3 76 aa5.68□□□□□ -1.5
SNX6-203ENST00000555416 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
SNX6-203ENST00000555416 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
SNX6-203ENST00000555416 PCP4P48539 62 aa5.65□□□□□ -1.5
SNX6-203ENST00000555416 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
SNX6-203ENST00000555416 NEBP20929 6669 aa5.62□□□□□ -1.51
SNX6-203ENST00000555416 KMT2DO14686 5537 aa5.6□□□□□ -1.51
SNX6-203ENST00000555416 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
SNX6-203ENST00000555416 COX7CP15954 63 aa5.59□□□□□ -1.51
SNX6-203ENST00000555416 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
SNX6-203ENST00000555416 COA5Q86WW8 74 aa5.58□□□□□ -1.52
SNX6-203ENST00000555416 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
SNX6-203ENST00000555416 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
SNX6-203ENST00000555416 H7BZZ5 65 aa5.53□□□□□ -1.52
SNX6-203ENST00000555416 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
SNX6-203ENST00000555416 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
SNX6-203ENST00000555416 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
SNX6-203ENST00000555416 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
SNX6-203ENST00000555416 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
SNX6-203ENST00000555416 ANAPC13Q9BS18 74 aa5.42□□□□□ -1.54
SNX6-203ENST00000555416 SPRR2EP22531 72 aa5.41□□□□□ -1.54
SNX6-203ENST00000555416 SPRR2BP35325 72 aa5.41□□□□□ -1.54
SNX6-203ENST00000555416 SPRR2AP35326 72 aa5.41□□□□□ -1.54
SNX6-203ENST00000555416 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
SNX6-203ENST00000555416 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
SNX6-203ENST00000555416 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
SNX6-203ENST00000555416 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
SNX6-203ENST00000555416 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
SNX6-203ENST00000555416 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
SNX6-203ENST00000555416 A0A0D9SG42 100 aa5.36□□□□□ -1.55
SNX6-203ENST00000555416 SEC61GP60059 68 aa5.36□□□□□ -1.55
SNX6-203ENST00000555416 A0A1B0GU33 70 aa5.33□□□□□ -1.56
SNX6-203ENST00000555416 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
SNX6-203ENST00000555416 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
SNX6-203ENST00000555416 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
SNX6-203ENST00000555416 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
SNX6-203ENST00000555416 A0A1B0GU69 56 aa5.25□□□□□ -1.57
SNX6-203ENST00000555416 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
SNX6-203ENST00000555416 SPRR2DP22532 72 aa5.22□□□□□ -1.57
SNX6-203ENST00000555416 A8MU10 97 aa5.21□□□□□ -1.58
SNX6-203ENST00000555416 ATP5EP56381 51 aaPredicted RBP5.17□□□□□ -1.58
SNX6-203ENST00000555416 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
SNX6-203ENST00000555416 SMIM26A0A096LP01 95 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms