RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
NEK9-205ENST00000555405 S4R3F8 94 aa5.08□□□□□ -1.6
NEK9-205ENST00000555405 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
NEK9-205ENST00000555405 MPLKIPQ8TAP9 179 aa5.07□□□□□ -1.6
NEK9-205ENST00000555405 A8MUN3 132 aa5.05□□□□□ -1.6
NEK9-205ENST00000555405 LCA10Q71F78 164 aa5.05□□□□□ -1.6
NEK9-205ENST00000555405 SERP1Q9Y6X1 66 aa5.05□□□□□ -1.6
NEK9-205ENST00000555405 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
NEK9-205ENST00000555405 SPTSSBQ8NFR3 76 aa4.97□□□□□ -1.61
NEK9-205ENST00000555405 SEC61GP60059 68 aa4.96□□□□□ -1.62
NEK9-205ENST00000555405 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
NEK9-205ENST00000555405 PSPHP1O15172 72 aa4.95□□□□□ -1.62
NEK9-205ENST00000555405 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
NEK9-205ENST00000555405 SMIM26A0A096LP01 95 aa4.93□□□□□ -1.62
NEK9-205ENST00000555405 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
NEK9-205ENST00000555405 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.62
NEK9-205ENST00000555405 A0A1B0GU69 56 aa4.9□□□□□ -1.63
NEK9-205ENST00000555405 MT1HP80294 61 aa4.9□□□□□ -1.63
NEK9-205ENST00000555405 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
NEK9-205ENST00000555405 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
NEK9-205ENST00000555405 V9GYY9 64 aa4.88□□□□□ -1.63
NEK9-205ENST00000555405 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
NEK9-205ENST00000555405 P0C880 135 aa4.84□□□□□ -1.63
NEK9-205ENST00000555405 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
NEK9-205ENST00000555405 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
NEK9-205ENST00000555405 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
NEK9-205ENST00000555405 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
NEK9-205ENST00000555405 Q1T7F1 81 aa4.78□□□□□ -1.64
NEK9-205ENST00000555405 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.65
NEK9-205ENST00000555405 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.65
NEK9-205ENST00000555405 A0A0D9SG42 100 aa4.77□□□□□ -1.65
NEK9-205ENST00000555405 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
NEK9-205ENST00000555405 A6NED7 52 aa4.77□□□□□ -1.65
NEK9-205ENST00000555405 A0A1B0GU33 70 aa4.76□□□□□ -1.65
NEK9-205ENST00000555405 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
NEK9-205ENST00000555405 R4GN34 69 aa4.75□□□□□ -1.65
NEK9-205ENST00000555405 M0QZ58 72 aa4.74□□□□□ -1.65
NEK9-205ENST00000555405 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
NEK9-205ENST00000555405 Q5VV11 94 aa4.74□□□□□ -1.65
NEK9-205ENST00000555405 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
NEK9-205ENST00000555405 MT2AP02795 61 aa4.7□□□□□ -1.66
NEK9-205ENST00000555405 A8MU10 97 aa4.69□□□□□ -1.66
NEK9-205ENST00000555405 UQCR11O14957 56 aa4.69□□□□□ -1.66
NEK9-205ENST00000555405 MT1FP04733 61 aa4.69□□□□□ -1.66
NEK9-205ENST00000555405 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
NEK9-205ENST00000555405 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
NEK9-205ENST00000555405 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.66
NEK9-205ENST00000555405 PMAIP1Q13794 54 aa4.65□□□□□ -1.66
NEK9-205ENST00000555405 H0YAA0 97 aa4.65□□□□□ -1.66
NEK9-205ENST00000555405 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
NEK9-205ENST00000555405 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
NEK9-205ENST00000555405 H3BS24 57 aa4.6□□□□□ -1.67
NEK9-205ENST00000555405 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
NEK9-205ENST00000555405 USH2AO75445 5202 aa4.52□□□□□ -1.69
NEK9-205ENST00000555405 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
NEK9-205ENST00000555405 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
NEK9-205ENST00000555405 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
NEK9-205ENST00000555405 K7ERS5 55 aa4.5□□□□□ -1.69
NEK9-205ENST00000555405 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
NEK9-205ENST00000555405 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
NEK9-205ENST00000555405 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
NEK9-205ENST00000555405 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
NEK9-205ENST00000555405 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
NEK9-205ENST00000555405 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
NEK9-205ENST00000555405 MT1BP07438 61 aa4.37□□□□□ -1.71
NEK9-205ENST00000555405 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
NEK9-205ENST00000555405 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
NEK9-205ENST00000555405 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
NEK9-205ENST00000555405 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
NEK9-205ENST00000555405 A6NN06 94 aa4.3□□□□□ -1.72
NEK9-205ENST00000555405 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
NEK9-205ENST00000555405 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
NEK9-205ENST00000555405 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
NEK9-205ENST00000555405 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
NEK9-205ENST00000555405 ROMO1P60602 79 aa4.23□□□□□ -1.73
NEK9-205ENST00000555405 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
NEK9-205ENST00000555405 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
NEK9-205ENST00000555405 MT1XP80297 61 aa4.2□□□□□ -1.74
NEK9-205ENST00000555405 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
NEK9-205ENST00000555405 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
NEK9-205ENST00000555405 TNP1P09430 55 aa4.16□□□□□ -1.74
NEK9-205ENST00000555405 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
NEK9-205ENST00000555405 KMT2DO14686 5537 aa4.14□□□□□ -1.75
NEK9-205ENST00000555405 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
NEK9-205ENST00000555405 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
NEK9-205ENST00000555405 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
NEK9-205ENST00000555405 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
NEK9-205ENST00000555405 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
NEK9-205ENST00000555405 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
NEK9-205ENST00000555405 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
NEK9-205ENST00000555405 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
NEK9-205ENST00000555405 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
NEK9-205ENST00000555405 LCE3AQ5TA76 89 aa4□□□□□ -1.77
NEK9-205ENST00000555405 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
NEK9-205ENST00000555405 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
NEK9-205ENST00000555405 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
NEK9-205ENST00000555405 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
NEK9-205ENST00000555405 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
NEK9-205ENST00000555405 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
NEK9-205ENST00000555405 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms