RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 Q5W150 140 aa6.3□□□□□ -1.4
SRP54-205ENST00000554803 A6NN06 94 aa6.29□□□□□ -1.4
SRP54-205ENST00000554803 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
SRP54-205ENST00000554803 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
SRP54-205ENST00000554803 SPINK1P00995 79 aa6.26□□□□□ -1.41
SRP54-205ENST00000554803 KRTAP13-2Q52LG2 175 aa6.26□□□□□ -1.41
SRP54-205ENST00000554803 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
SRP54-205ENST00000554803 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
SRP54-205ENST00000554803 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
SRP54-205ENST00000554803 A0A1B0GU69 56 aa6.22□□□□□ -1.41
SRP54-205ENST00000554803 SPINK7P58062 85 aa6.21□□□□□ -1.42
SRP54-205ENST00000554803 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
SRP54-205ENST00000554803 A8MU10 97 aa6.19□□□□□ -1.42
SRP54-205ENST00000554803 UQCR11O14957 56 aa6.19□□□□□ -1.42
SRP54-205ENST00000554803 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
SRP54-205ENST00000554803 LCE2BO14633 110 aa6.17□□□□□ -1.42
SRP54-205ENST00000554803 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
SRP54-205ENST00000554803 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
SRP54-205ENST00000554803 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
SRP54-205ENST00000554803 RBM12B-AS1Q9P1G2 102 aa6.11□□□□□ -1.43
SRP54-205ENST00000554803 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
SRP54-205ENST00000554803 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
SRP54-205ENST00000554803 A8MUU9 505 aa6.03□□□□□ -1.44
SRP54-205ENST00000554803 RETNLBQ9BQ08 111 aa6.03□□□□□ -1.44
SRP54-205ENST00000554803 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
SRP54-205ENST00000554803 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
SRP54-205ENST00000554803 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
SRP54-205ENST00000554803 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
SRP54-205ENST00000554803 A0A1B0GU33 70 aa5.87□□□□□ -1.47
SRP54-205ENST00000554803 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
SRP54-205ENST00000554803 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
SRP54-205ENST00000554803 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
SRP54-205ENST00000554803 K7ERS5 55 aa5.86□□□□□ -1.47
SRP54-205ENST00000554803 MT1HP80294 61 aa5.85□□□□□ -1.47
SRP54-205ENST00000554803 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
SRP54-205ENST00000554803 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
SRP54-205ENST00000554803 C9orf92A6NGG3 77 aa5.83□□□□□ -1.48
SRP54-205ENST00000554803 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
SRP54-205ENST00000554803 SEC61BP60468 96 aaKnown RBP5.82□□□□□ -1.48
SRP54-205ENST00000554803 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
SRP54-205ENST00000554803 USH2AO75445 5202 aa5.81□□□□□ -1.48
SRP54-205ENST00000554803 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
SRP54-205ENST00000554803 H0YAA0 97 aa5.79□□□□□ -1.48
SRP54-205ENST00000554803 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
SRP54-205ENST00000554803 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
SRP54-205ENST00000554803 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
SRP54-205ENST00000554803 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
SRP54-205ENST00000554803 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
SRP54-205ENST00000554803 XP32Q5T750 250 aa5.74□□□□□ -1.49
SRP54-205ENST00000554803 CSAG1Q6PB30 78 aa5.74□□□□□ -1.49
SRP54-205ENST00000554803 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
SRP54-205ENST00000554803 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
SRP54-205ENST00000554803 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
SRP54-205ENST00000554803 M0R2T5 61 aa5.68□□□□□ -1.5
SRP54-205ENST00000554803 H3BS24 57 aa5.67□□□□□ -1.5
SRP54-205ENST00000554803 ROMO1P60602 79 aa5.62□□□□□ -1.51
SRP54-205ENST00000554803 S4R3F8 94 aa5.62□□□□□ -1.51
SRP54-205ENST00000554803 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
SRP54-205ENST00000554803 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
SRP54-205ENST00000554803 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
SRP54-205ENST00000554803 M0QZ58 72 aa5.5□□□□□ -1.53
SRP54-205ENST00000554803 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.54
SRP54-205ENST00000554803 NEBP20929 6669 aa5.45□□□□□ -1.54
SRP54-205ENST00000554803 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
SRP54-205ENST00000554803 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
SRP54-205ENST00000554803 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
SRP54-205ENST00000554803 A0A0D9SG42 100 aa5.38□□□□□ -1.55
SRP54-205ENST00000554803 P0C880 135 aa5.38□□□□□ -1.55
SRP54-205ENST00000554803 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
SRP54-205ENST00000554803 KRTAP12-1P59990 96 aa5.33□□□□□ -1.56
SRP54-205ENST00000554803 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
SRP54-205ENST00000554803 MT2AP02795 61 aa5.32□□□□□ -1.56
SRP54-205ENST00000554803 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
SRP54-205ENST00000554803 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
SRP54-205ENST00000554803 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
SRP54-205ENST00000554803 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
SRP54-205ENST00000554803 MT1FP04733 61 aa5.27□□□□□ -1.57
SRP54-205ENST00000554803 SPINT4Q6UDR6 99 aa5.27□□□□□ -1.57
SRP54-205ENST00000554803 KRTAP10-10P60014 251 aa5.21□□□□□ -1.58
SRP54-205ENST00000554803 R4GN34 69 aa5.21□□□□□ -1.58
SRP54-205ENST00000554803 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
SRP54-205ENST00000554803 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
SRP54-205ENST00000554803 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
SRP54-205ENST00000554803 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
SRP54-205ENST00000554803 KMT2DO14686 5537 aa5.04□□□□□ -1.6
SRP54-205ENST00000554803 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
SRP54-205ENST00000554803 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
SRP54-205ENST00000554803 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
SRP54-205ENST00000554803 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
SRP54-205ENST00000554803 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
SRP54-205ENST00000554803 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
SRP54-205ENST00000554803 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
SRP54-205ENST00000554803 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
SRP54-205ENST00000554803 TNP1P09430 55 aa4.85□□□□□ -1.63
SRP54-205ENST00000554803 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
SRP54-205ENST00000554803 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
SRP54-205ENST00000554803 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
SRP54-205ENST00000554803 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
SRP54-205ENST00000554803 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
SRP54-205ENST00000554803 SPRR2EP22531 72 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms