RNA–Protein interactions for RNA: ENST00000554042.1

AL450442.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL450442.1, Length 854 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL450442.1-201ENST00000554042 TACC2O95359 2948 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 SRRM2Q9UQ35 2752 aaKnown RBP0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 CEP290O15078 2479 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 TOGARAM1Q9Y4F4 1720 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 PRLHP81277 87 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 MINOS1Q5TGZ0 78 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 WDFY3Q8IZQ1 3526 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 CDH23Q9H251 3354 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 ANKRD36CQ5JPF3 1778 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 FRYLO94915 3013 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 CPS1P31327 1500 aa0.08□□□□□ -2.4
AL450442.1-201ENST00000554042 UGGT1Q9NYU2 1555 aa0.07□□□□□ -2.4
AL450442.1-201ENST00000554042 VPS13AQ96RL7 3174 aa0.07□□□□□ -2.4
AL450442.1-201ENST00000554042 TRIOO75962 3097 aa0.07□□□□□ -2.4
AL450442.1-201ENST00000554042 SERF2P84101 59 aa0.07□□□□□ -2.4
AL450442.1-201ENST00000554042 NCBP2-AS2Q69YL0 99 aa0.07□□□□□ -2.4
AL450442.1-201ENST00000554042 NBASA2RRP1 2371 aa0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 EEA1Q15075 1411 aa0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 XIRP2A4UGR9 3374 aa0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 RPS27P42677 84 aaKnown RBP0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 RPS27LQ71UM5 84 aaKnown RBP0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 NMES1Q9C002 83 aa0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 SMG1Q96Q15 3661 aaKnown RBP0.06□□□□□ -2.4
AL450442.1-201ENST00000554042 PRUNE2Q8WUY3 3088 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 FRYQ5TBA9 3013 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 M0R1W7 72 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 WT1-ASQ06250 92 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 DEFB106AQ8N104 65 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 C6orf48Q9UBA6 75 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 S4R3F8 94 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 DYNC1H1Q14204 4646 aaKnown RBP0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 MROH2AA6NES4 1674 aa0.05□□□□□ -2.4
AL450442.1-201ENST00000554042 GOLGB1Q14789 3259 aaKnown RBP0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 ATMQ13315 3056 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 IGIPA6NJ69 53 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 LYSTQ99698 3801 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 ADCY10Q96PN6 1610 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 ZZEF1O43149 2961 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 CENPEQ02224 2701 aa0.04□□□□□ -2.4
AL450442.1-201ENST00000554042 VPS13BQ7Z7G8 4022 aa0.03□□□□□ -2.4
AL450442.1-201ENST00000554042 CHD7Q9P2D1 2997 aa0.03□□□□□ -2.4
AL450442.1-201ENST00000554042 C9orf92A6NGG3 77 aa0.03□□□□□ -2.4
AL450442.1-201ENST00000554042 FCER1GP30273 86 aa0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 DNAH9Q9NYC9 4486 aa0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 DNAH7Q8WXX0 4024 aa0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 ABCA5Q8WWZ7 1642 aa0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 FLGP20930 4061 aaPredicted RBP0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 DNAH3Q8TD57 4116 aa0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 ANK3Q12955 4377 aaKnown RBP0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 KRTAP20-2Q3LI61 65 aa0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 KRTAP6-2Q3LI66 62 aa0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 SPRR2FQ96RM1 72 aa0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 NRXN3Q9Y4C0 1643 aa0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 PKHD1L1Q86WI1 4243 aa0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 H3BUA1 57 aa0□□□□□ -2.41
AL450442.1-201ENST00000554042 TMEM167BQ9NRX6 74 aa0□□□□□ -2.41
AL450442.1-201ENST00000554042 TIMM8BQ9Y5J9 83 aaPredicted RBP0□□□□□ -2.41
AL450442.1-201ENST00000554042 FAT1Q14517 4588 aa-0.01□□□□□ -2.41
AL450442.1-201ENST00000554042 AGLP35573 1532 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 SACSQ9NZJ4 4579 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 FANCD2Q9BXW9 1451 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 H3BNG1 76 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 SMR3BP02814 79 aaPredicted RBP-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 A0A1B0GUL6 1792 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 LMO7Q8WWI1 1683 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 ABCC8Q09428 1581 aa-0.02□□□□□ -2.41
AL450442.1-201ENST00000554042 H0YGX0 51 aa-0.03□□□□□ -2.41
AL450442.1-201ENST00000554042 KRTAP6-1Q3LI64 71 aa-0.03□□□□□ -2.41
AL450442.1-201ENST00000554042 APOBP04114 4563 aaKnown RBP-0.03□□□□□ -2.41
AL450442.1-201ENST00000554042 KIF21BO75037 1637 aa-0.04□□□□□ -2.42
AL450442.1-201ENST00000554042 LINC00308Q8TCZ7 52 aa-0.04□□□□□ -2.42
AL450442.1-201ENST00000554042 NOP10Q9NPE3 64 aaKnown RBP-0.04□□□□□ -2.42
AL450442.1-201ENST00000554042 EFCAB6Q5THR3 1501 aa-0.04□□□□□ -2.42
AL450442.1-201ENST00000554042 DNAH1Q9P2D7 4330 aa-0.04□□□□□ -2.42
AL450442.1-201ENST00000554042 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
AL450442.1-201ENST00000554042 MT1AP04731 61 aa-0.05□□□□□ -2.42
AL450442.1-201ENST00000554042 DNAH5Q8TE73 4624 aa-0.06□□□□□ -2.42
AL450442.1-201ENST00000554042 PLNP26678 52 aa-0.06□□□□□ -2.42
AL450442.1-201ENST00000554042 DNAH2Q9P225 4427 aa-0.06□□□□□ -2.42
AL450442.1-201ENST00000554042 VPS13DQ5THJ4 4388 aa-0.06□□□□□ -2.42
AL450442.1-201ENST00000554042 DNAH11Q96DT5 4516 aa-0.06□□□□□ -2.42
AL450442.1-201ENST00000554042 PLECQ15149 4684 aaKnown RBP-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 AKAP9Q99996 3911 aa-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 FAM208AQ9UK61 1670 aaKnown RBP-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 ACACAQ13085 2346 aa-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 CMYA5Q8N3K9 4069 aa-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 DMDP11532 3685 aa-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 DNAH6Q9C0G6 4158 aa-0.07□□□□□ -2.42
AL450442.1-201ENST00000554042 IQGAP1P46940 1657 aa-0.08□□□□□ -2.42
AL450442.1-201ENST00000554042 CMC2Q9NRP2 79 aa-0.08□□□□□ -2.42
AL450442.1-201ENST00000554042 TRRAPQ9Y4A5 3859 aa-0.08□□□□□ -2.42
AL450442.1-201ENST00000554042 ABRACLQ9P1F3 81 aa-0.09□□□□□ -2.42
AL450442.1-201ENST00000554042 MUC17Q685J3 4493 aa-0.09□□□□□ -2.42
AL450442.1-201ENST00000554042 MMP24-AS1A0A0U1RRL7 71 aa-0.1□□□□□ -2.43
AL450442.1-201ENST00000554042 KRTAP8-1Q8IUC2 63 aa-0.1□□□□□ -2.43
AL450442.1-201ENST00000554042 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.1□□□□□ -2.43
AL450442.1-201ENST00000554042 DNAH10Q8IVF4 4471 aa-0.1□□□□□ -2.43
AL450442.1-201ENST00000554042 DEFB104AQ8WTQ1 72 aa-0.11□□□□□ -2.43
AL450442.1-201ENST00000554042 DDX60Q8IY21 1712 aaKnown RBP-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms