RNA–Protein interactions for RNA: ENST00000554034.5

CDH24-205, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH24, Length 2,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-205ENST00000554034 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
CDH24-205ENST00000554034 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
CDH24-205ENST00000554034 TNXBP22105 4242 aa9.8□□□□□ -0.84
CDH24-205ENST00000554034 A0A0D9SG42 100 aa9.77□□□□□ -0.84
CDH24-205ENST00000554034 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
CDH24-205ENST00000554034 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
CDH24-205ENST00000554034 RYR3Q15413 4870 aa9.75□□□□□ -0.85
CDH24-205ENST00000554034 KRTAP10-8P60410 259 aa9.74□□□□□ -0.85
CDH24-205ENST00000554034 K7ERS5 55 aa9.74□□□□□ -0.85
CDH24-205ENST00000554034 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
CDH24-205ENST00000554034 LPAP08519 4548 aa9.66□□□□□ -0.86
CDH24-205ENST00000554034 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
CDH24-205ENST00000554034 ROMO1P60602 79 aa9.63□□□□□ -0.87
CDH24-205ENST00000554034 RPL37P61927 97 aaKnown RBP9.62□□□□□ -0.87
CDH24-205ENST00000554034 P0C880 135 aa9.6□□□□□ -0.87
CDH24-205ENST00000554034 XP32Q5T750 250 aa9.6□□□□□ -0.87
CDH24-205ENST00000554034 S4R3F8 94 aa9.58□□□□□ -0.88
CDH24-205ENST00000554034 KRTAP17-1Q9BYP8 105 aa9.55□□□□□ -0.88
CDH24-205ENST00000554034 Q5VSD8 79 aa9.53□□□□□ -0.88
CDH24-205ENST00000554034 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
CDH24-205ENST00000554034 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
CDH24-205ENST00000554034 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
CDH24-205ENST00000554034 LRP2P98164 4655 aa9.49□□□□□ -0.89
CDH24-205ENST00000554034 RYR1P21817 5038 aa9.48□□□□□ -0.89
CDH24-205ENST00000554034 KRTAP12-2P59991 146 aa9.43□□□□□ -0.9
CDH24-205ENST00000554034 EPPK1P58107 5090 aaKnown RBP9.42□□□□□ -0.9
CDH24-205ENST00000554034 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
CDH24-205ENST00000554034 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
CDH24-205ENST00000554034 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
CDH24-205ENST00000554034 ABCA13Q86UQ4 5058 aa9.21□□□□□ -0.94
CDH24-205ENST00000554034 NDUFAF8A1L188 74 aa9.19□□□□□ -0.94
CDH24-205ENST00000554034 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
CDH24-205ENST00000554034 A0A0A0MQY5 61 aa9.08□□□□□ -0.96
CDH24-205ENST00000554034 M0QZ58 72 aa9.06□□□□□ -0.96
CDH24-205ENST00000554034 KRTAP15-1Q3LI76 137 aa9.04□□□□□ -0.96
CDH24-205ENST00000554034 R4GN34 69 aa8.96□□□□□ -0.97
CDH24-205ENST00000554034 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
CDH24-205ENST00000554034 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
CDH24-205ENST00000554034 MUC2Q02817 5179 aa8.82□□□□□ -1
CDH24-205ENST00000554034 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
CDH24-205ENST00000554034 HERC2O95714 4834 aa8.8□□□□□ -1
CDH24-205ENST00000554034 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
CDH24-205ENST00000554034 J3QL48 77 aa8.65□□□□□ -1.02
CDH24-205ENST00000554034 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.03
CDH24-205ENST00000554034 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
CDH24-205ENST00000554034 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
CDH24-205ENST00000554034 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
CDH24-205ENST00000554034 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
CDH24-205ENST00000554034 HERC1Q15751 4861 aa8.51□□□□□ -1.05
CDH24-205ENST00000554034 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
CDH24-205ENST00000554034 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
CDH24-205ENST00000554034 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
CDH24-205ENST00000554034 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
CDH24-205ENST00000554034 HMCN2Q8NDA2 5059 aa8.27□□□□□ -1.09
CDH24-205ENST00000554034 TNP1P09430 55 aa8.16□□□□□ -1.1
CDH24-205ENST00000554034 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
CDH24-205ENST00000554034 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
CDH24-205ENST00000554034 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
CDH24-205ENST00000554034 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
CDH24-205ENST00000554034 M0R2T5 61 aa7.92□□□□□ -1.14
CDH24-205ENST00000554034 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
CDH24-205ENST00000554034 KRTAP23-1A1A580 65 aa7.85□□□□□ -1.15
CDH24-205ENST00000554034 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
CDH24-205ENST00000554034 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
CDH24-205ENST00000554034 MT1HP80294 61 aa7.76□□□□□ -1.17
CDH24-205ENST00000554034 MT1FP04733 61 aa7.75□□□□□ -1.17
CDH24-205ENST00000554034 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
CDH24-205ENST00000554034 MT2AP02795 61 aa7.69□□□□□ -1.18
CDH24-205ENST00000554034 KRTAP9-8Q9BYQ0 159 aa7.6□□□□□ -1.19
CDH24-205ENST00000554034 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
CDH24-205ENST00000554034 MT1BP07438 61 aa7.48□□□□□ -1.21
CDH24-205ENST00000554034 MT1XP80297 61 aa7.48□□□□□ -1.21
CDH24-205ENST00000554034 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
CDH24-205ENST00000554034 KRTAP19-8Q3LI54 63 aa7.46□□□□□ -1.22
CDH24-205ENST00000554034 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
CDH24-205ENST00000554034 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
CDH24-205ENST00000554034 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
CDH24-205ENST00000554034 USH2AO75445 5202 aa7.3□□□□□ -1.24
CDH24-205ENST00000554034 KMT2DO14686 5537 aa7.28□□□□□ -1.24
CDH24-205ENST00000554034 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
CDH24-205ENST00000554034 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
CDH24-205ENST00000554034 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
CDH24-205ENST00000554034 LCE2BO14633 110 aa7.02□□□□□ -1.29
CDH24-205ENST00000554034 INE1O15225 51 aa6.97□□□□□ -1.29
CDH24-205ENST00000554034 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
CDH24-205ENST00000554034 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
CDH24-205ENST00000554034 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
CDH24-205ENST00000554034 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
CDH24-205ENST00000554034 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
CDH24-205ENST00000554034 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
CDH24-205ENST00000554034 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
CDH24-205ENST00000554034 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
CDH24-205ENST00000554034 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
CDH24-205ENST00000554034 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
CDH24-205ENST00000554034 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
CDH24-205ENST00000554034 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
CDH24-205ENST00000554034 MT1LQ93083 61 aa6.46□□□□□ -1.37
CDH24-205ENST00000554034 MT1EP04732 61 aa6.43□□□□□ -1.38
CDH24-205ENST00000554034 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
CDH24-205ENST00000554034 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms