RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 S4R3F8 94 aa8.72□□□□□ -1.01
PSEN1-206ENST00000553447 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
PSEN1-206ENST00000553447 LCA10Q71F78 164 aa8.68□□□□□ -1.02
PSEN1-206ENST00000553447 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
PSEN1-206ENST00000553447 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
PSEN1-206ENST00000553447 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
PSEN1-206ENST00000553447 MUC2Q02817 5179 aa8.64□□□□□ -1.03
PSEN1-206ENST00000553447 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
PSEN1-206ENST00000553447 Q1T7F1 81 aa8.52□□□□□ -1.05
PSEN1-206ENST00000553447 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
PSEN1-206ENST00000553447 LINC01558Q9Y6Z2 57 aa8.51□□□□□ -1.05
PSEN1-206ENST00000553447 V9GYY9 64 aa8.51□□□□□ -1.05
PSEN1-206ENST00000553447 FLGP20930 4061 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-206ENST00000553447 MT1HP80294 61 aa8.43□□□□□ -1.06
PSEN1-206ENST00000553447 A0A1B0GU69 56 aa8.4□□□□□ -1.06
PSEN1-206ENST00000553447 PRR15LQ9BU68 103 aa8.4□□□□□ -1.06
PSEN1-206ENST00000553447 LCE2BO14633 110 aa8.39□□□□□ -1.07
PSEN1-206ENST00000553447 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
PSEN1-206ENST00000553447 SEC61GP60059 68 aa8.38□□□□□ -1.07
PSEN1-206ENST00000553447 PSPHP1O15172 72 aa8.37□□□□□ -1.07
PSEN1-206ENST00000553447 H0YAA0 97 aa8.33□□□□□ -1.08
PSEN1-206ENST00000553447 M0R2T5 61 aa8.33□□□□□ -1.08
PSEN1-206ENST00000553447 Q5VV11 94 aa8.31□□□□□ -1.08
PSEN1-206ENST00000553447 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
PSEN1-206ENST00000553447 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-206ENST00000553447 P0C880 135 aa8.24□□□□□ -1.09
PSEN1-206ENST00000553447 A0A1B0GU33 70 aa8.18□□□□□ -1.1
PSEN1-206ENST00000553447 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-206ENST00000553447 A6NED7 52 aa8.12□□□□□ -1.11
PSEN1-206ENST00000553447 UQCR11O14957 56 aa8.12□□□□□ -1.11
PSEN1-206ENST00000553447 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
PSEN1-206ENST00000553447 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-206ENST00000553447 MT2AP02795 61 aa8.08□□□□□ -1.12
PSEN1-206ENST00000553447 KRTAP13-4Q3LI77 160 aa8.04□□□□□ -1.12
PSEN1-206ENST00000553447 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
PSEN1-206ENST00000553447 M0QZ58 72 aa8.03□□□□□ -1.12
PSEN1-206ENST00000553447 MT1FP04733 61 aa8.03□□□□□ -1.12
PSEN1-206ENST00000553447 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
PSEN1-206ENST00000553447 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
PSEN1-206ENST00000553447 R4GN34 69 aa8.01□□□□□ -1.13
PSEN1-206ENST00000553447 KRTAP10-10P60014 251 aa8□□□□□ -1.13
PSEN1-206ENST00000553447 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
PSEN1-206ENST00000553447 BRK1Q8WUW1 75 aa7.95□□□□□ -1.14
PSEN1-206ENST00000553447 A8MU10 97 aa7.92□□□□□ -1.14
PSEN1-206ENST00000553447 A0A0D9SG42 100 aa7.88□□□□□ -1.15
PSEN1-206ENST00000553447 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
PSEN1-206ENST00000553447 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
PSEN1-206ENST00000553447 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
PSEN1-206ENST00000553447 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
PSEN1-206ENST00000553447 A6NN06 94 aa7.73□□□□□ -1.17
PSEN1-206ENST00000553447 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
PSEN1-206ENST00000553447 PRO0628Q9UI54 55 aa7.72□□□□□ -1.17
PSEN1-206ENST00000553447 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
PSEN1-206ENST00000553447 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
PSEN1-206ENST00000553447 K7ERS5 55 aa7.68□□□□□ -1.18
PSEN1-206ENST00000553447 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
PSEN1-206ENST00000553447 MT1BP07438 61 aa7.58□□□□□ -1.2
PSEN1-206ENST00000553447 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
PSEN1-206ENST00000553447 PMAIP1Q13794 54 aa7.5□□□□□ -1.21
PSEN1-206ENST00000553447 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
PSEN1-206ENST00000553447 ROMO1P60602 79 aa7.36□□□□□ -1.23
PSEN1-206ENST00000553447 USH2AO75445 5202 aa7.34□□□□□ -1.23
PSEN1-206ENST00000553447 C10orf95Q9H7T3 257 aa7.33□□□□□ -1.24
PSEN1-206ENST00000553447 MT1XP80297 61 aa7.31□□□□□ -1.24
PSEN1-206ENST00000553447 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
PSEN1-206ENST00000553447 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
PSEN1-206ENST00000553447 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
PSEN1-206ENST00000553447 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
PSEN1-206ENST00000553447 KTN1-AS1Q86SY8 53 aa7.17□□□□□ -1.26
PSEN1-206ENST00000553447 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
PSEN1-206ENST00000553447 TNP1P09430 55 aa7.12□□□□□ -1.27
PSEN1-206ENST00000553447 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
PSEN1-206ENST00000553447 PRAC1Q96KF2 57 aa7.05□□□□□ -1.28
PSEN1-206ENST00000553447 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
PSEN1-206ENST00000553447 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
PSEN1-206ENST00000553447 H3BS24 57 aa6.98□□□□□ -1.29
PSEN1-206ENST00000553447 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
PSEN1-206ENST00000553447 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
PSEN1-206ENST00000553447 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
PSEN1-206ENST00000553447 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
PSEN1-206ENST00000553447 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
PSEN1-206ENST00000553447 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-206ENST00000553447 SVIPQ8NHG7 77 aa6.77□□□□□ -1.33
PSEN1-206ENST00000553447 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
PSEN1-206ENST00000553447 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
PSEN1-206ENST00000553447 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
PSEN1-206ENST00000553447 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
PSEN1-206ENST00000553447 KMT2DO14686 5537 aa6.63□□□□□ -1.35
PSEN1-206ENST00000553447 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
PSEN1-206ENST00000553447 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
PSEN1-206ENST00000553447 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
PSEN1-206ENST00000553447 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
PSEN1-206ENST00000553447 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
PSEN1-206ENST00000553447 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
PSEN1-206ENST00000553447 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
PSEN1-206ENST00000553447 MT1EP04732 61 aa6.42□□□□□ -1.38
PSEN1-206ENST00000553447 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
PSEN1-206ENST00000553447 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
PSEN1-206ENST00000553447 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
PSEN1-206ENST00000553447 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms