RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
HDAC7-230ENST00000552960 A8MUU9 505 aa6.68□□□□□ -1.34
HDAC7-230ENST00000552960 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
HDAC7-230ENST00000552960 ROMO1P60602 79 aa6.65□□□□□ -1.34
HDAC7-230ENST00000552960 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
HDAC7-230ENST00000552960 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
HDAC7-230ENST00000552960 Q5VSD8 79 aa6.63□□□□□ -1.35
HDAC7-230ENST00000552960 K7ERS5 55 aa6.6□□□□□ -1.35
HDAC7-230ENST00000552960 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
HDAC7-230ENST00000552960 A0A0D9SG42 100 aa6.55□□□□□ -1.36
HDAC7-230ENST00000552960 COX6B2Q6YFQ2 88 aa6.55□□□□□ -1.36
HDAC7-230ENST00000552960 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
HDAC7-230ENST00000552960 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
HDAC7-230ENST00000552960 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
HDAC7-230ENST00000552960 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
HDAC7-230ENST00000552960 P0C880 135 aa6.48□□□□□ -1.37
HDAC7-230ENST00000552960 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
HDAC7-230ENST00000552960 LPAP08519 4548 aa6.46□□□□□ -1.38
HDAC7-230ENST00000552960 HERC2O95714 4834 aa6.44□□□□□ -1.38
HDAC7-230ENST00000552960 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
HDAC7-230ENST00000552960 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
HDAC7-230ENST00000552960 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
HDAC7-230ENST00000552960 LRP2P98164 4655 aa6.4□□□□□ -1.39
HDAC7-230ENST00000552960 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
HDAC7-230ENST00000552960 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
HDAC7-230ENST00000552960 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
HDAC7-230ENST00000552960 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
HDAC7-230ENST00000552960 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
HDAC7-230ENST00000552960 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
HDAC7-230ENST00000552960 S4R3F8 94 aa6.31□□□□□ -1.4
HDAC7-230ENST00000552960 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
HDAC7-230ENST00000552960 HERC1Q15751 4861 aa6.28□□□□□ -1.4
HDAC7-230ENST00000552960 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
HDAC7-230ENST00000552960 J3QL48 77 aa6.26□□□□□ -1.41
HDAC7-230ENST00000552960 XP32Q5T750 250 aa6.23□□□□□ -1.41
HDAC7-230ENST00000552960 MUC2Q02817 5179 aa6.21□□□□□ -1.41
HDAC7-230ENST00000552960 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
HDAC7-230ENST00000552960 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
HDAC7-230ENST00000552960 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
HDAC7-230ENST00000552960 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
HDAC7-230ENST00000552960 HMCN2Q8NDA2 5059 aa6.03□□□□□ -1.44
HDAC7-230ENST00000552960 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
HDAC7-230ENST00000552960 M0QZ58 72 aa5.99□□□□□ -1.45
HDAC7-230ENST00000552960 RNF213Q63HN8 5207 aa5.96□□□□□ -1.46
HDAC7-230ENST00000552960 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
HDAC7-230ENST00000552960 R4GN34 69 aa5.95□□□□□ -1.46
HDAC7-230ENST00000552960 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
HDAC7-230ENST00000552960 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
HDAC7-230ENST00000552960 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
HDAC7-230ENST00000552960 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
HDAC7-230ENST00000552960 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
HDAC7-230ENST00000552960 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
HDAC7-230ENST00000552960 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
HDAC7-230ENST00000552960 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
HDAC7-230ENST00000552960 FLGP20930 4061 aaPredicted RBP5.68□□□□□ -1.5
HDAC7-230ENST00000552960 M0R2T5 61 aa5.67□□□□□ -1.5
HDAC7-230ENST00000552960 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
HDAC7-230ENST00000552960 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
HDAC7-230ENST00000552960 TNP1P09430 55 aa5.43□□□□□ -1.54
HDAC7-230ENST00000552960 MT1HP80294 61 aa5.4□□□□□ -1.54
HDAC7-230ENST00000552960 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
HDAC7-230ENST00000552960 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
HDAC7-230ENST00000552960 MT1FP04733 61 aa5.24□□□□□ -1.57
HDAC7-230ENST00000552960 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
HDAC7-230ENST00000552960 MT2AP02795 61 aa5.22□□□□□ -1.57
HDAC7-230ENST00000552960 USH2AO75445 5202 aa5.2□□□□□ -1.58
HDAC7-230ENST00000552960 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
HDAC7-230ENST00000552960 SPRR5A0A1B0GTR4 108 aa5.13□□□□□ -1.59
HDAC7-230ENST00000552960 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
HDAC7-230ENST00000552960 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
HDAC7-230ENST00000552960 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
HDAC7-230ENST00000552960 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
HDAC7-230ENST00000552960 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
HDAC7-230ENST00000552960 KMT2DO14686 5537 aa4.98□□□□□ -1.61
HDAC7-230ENST00000552960 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.62
HDAC7-230ENST00000552960 MT1BP07438 61 aa4.96□□□□□ -1.62
HDAC7-230ENST00000552960 LCE2BO14633 110 aa4.93□□□□□ -1.62
HDAC7-230ENST00000552960 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
HDAC7-230ENST00000552960 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
HDAC7-230ENST00000552960 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
HDAC7-230ENST00000552960 MT1XP80297 61 aa4.84□□□□□ -1.63
HDAC7-230ENST00000552960 KRTAP10-5P60370 271 aa4.84□□□□□ -1.64
HDAC7-230ENST00000552960 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
HDAC7-230ENST00000552960 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
HDAC7-230ENST00000552960 INE1O15225 51 aa4.8□□□□□ -1.64
HDAC7-230ENST00000552960 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
HDAC7-230ENST00000552960 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
HDAC7-230ENST00000552960 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
HDAC7-230ENST00000552960 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
HDAC7-230ENST00000552960 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
HDAC7-230ENST00000552960 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
HDAC7-230ENST00000552960 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
HDAC7-230ENST00000552960 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
HDAC7-230ENST00000552960 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
HDAC7-230ENST00000552960 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
HDAC7-230ENST00000552960 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
HDAC7-230ENST00000552960 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
HDAC7-230ENST00000552960 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
HDAC7-230ENST00000552960 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
HDAC7-230ENST00000552960 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms