RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 H3BPC8 53 aa7.63□□□□□ -1.19
GCN1-209ENST00000551920 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
GCN1-209ENST00000551920 TRAV7A0A075B6U4 112 aa7.57□□□□□ -1.2
GCN1-209ENST00000551920 A8MUN3 132 aa7.57□□□□□ -1.2
GCN1-209ENST00000551920 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
GCN1-209ENST00000551920 SMIM20Q8N5G0 67 aa7.55□□□□□ -1.2
GCN1-209ENST00000551920 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
GCN1-209ENST00000551920 NDUFC1O43677 76 aa7.47□□□□□ -1.21
GCN1-209ENST00000551920 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
GCN1-209ENST00000551920 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
GCN1-209ENST00000551920 SERP2Q8N6R1 65 aa7.42□□□□□ -1.22
GCN1-209ENST00000551920 H0YAA0 97 aa7.38□□□□□ -1.23
GCN1-209ENST00000551920 C20orf197Q8N268 126 aa7.37□□□□□ -1.23
GCN1-209ENST00000551920 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
GCN1-209ENST00000551920 FCGBPQ9Y6R7 5405 aaPredicted RBP7.35□□□□□ -1.23
GCN1-209ENST00000551920 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
GCN1-209ENST00000551920 ADM2Q7Z4H4 148 aa7.31□□□□□ -1.24
GCN1-209ENST00000551920 MT1BP07438 61 aa7.3□□□□□ -1.24
GCN1-209ENST00000551920 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
GCN1-209ENST00000551920 ACYP2P14621 99 aa7.28□□□□□ -1.24
GCN1-209ENST00000551920 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
GCN1-209ENST00000551920 SPANXA2-OT1Q8N9U9 137 aa7.26□□□□□ -1.25
GCN1-209ENST00000551920 COX7CP15954 63 aa7.25□□□□□ -1.25
GCN1-209ENST00000551920 P0C880 135 aa7.23□□□□□ -1.25
GCN1-209ENST00000551920 Q5VV11 94 aa7.23□□□□□ -1.25
GCN1-209ENST00000551920 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
GCN1-209ENST00000551920 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.26
GCN1-209ENST00000551920 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
GCN1-209ENST00000551920 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
GCN1-209ENST00000551920 H7BZZ5 65 aa7.13□□□□□ -1.27
GCN1-209ENST00000551920 SPTSSBQ8NFR3 76 aa7.12□□□□□ -1.27
GCN1-209ENST00000551920 ANAPC13Q9BS18 74 aa7.12□□□□□ -1.27
GCN1-209ENST00000551920 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
GCN1-209ENST00000551920 COA5Q86WW8 74 aa7.07□□□□□ -1.28
GCN1-209ENST00000551920 R4GN34 69 aa7.07□□□□□ -1.28
GCN1-209ENST00000551920 M0QZ58 72 aa7.06□□□□□ -1.28
GCN1-209ENST00000551920 A6NN06 94 aa7.04□□□□□ -1.28
GCN1-209ENST00000551920 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
GCN1-209ENST00000551920 CCDC179H3BU77 68 aa7.02□□□□□ -1.29
GCN1-209ENST00000551920 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
GCN1-209ENST00000551920 LINC01554Q52M75 96 aa6.94□□□□□ -1.3
GCN1-209ENST00000551920 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
GCN1-209ENST00000551920 MT1XP80297 61 aa6.9□□□□□ -1.3
GCN1-209ENST00000551920 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
GCN1-209ENST00000551920 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
GCN1-209ENST00000551920 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
GCN1-209ENST00000551920 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
GCN1-209ENST00000551920 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
GCN1-209ENST00000551920 SEC61GP60059 68 aa6.75□□□□□ -1.33
GCN1-209ENST00000551920 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
GCN1-209ENST00000551920 TMEM258P61165 79 aa6.72□□□□□ -1.33
GCN1-209ENST00000551920 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
GCN1-209ENST00000551920 A0A1B0GU33 70 aa6.67□□□□□ -1.34
GCN1-209ENST00000551920 A0A1B0GU69 56 aa6.66□□□□□ -1.34
GCN1-209ENST00000551920 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
GCN1-209ENST00000551920 KMT2DO14686 5537 aa6.63□□□□□ -1.35
GCN1-209ENST00000551920 A0A0D9SG42 100 aa6.63□□□□□ -1.35
GCN1-209ENST00000551920 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
GCN1-209ENST00000551920 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
GCN1-209ENST00000551920 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
GCN1-209ENST00000551920 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
GCN1-209ENST00000551920 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
GCN1-209ENST00000551920 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
GCN1-209ENST00000551920 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
GCN1-209ENST00000551920 NEBP20929 6669 aa6.52□□□□□ -1.37
GCN1-209ENST00000551920 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
GCN1-209ENST00000551920 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
GCN1-209ENST00000551920 A8MU10 97 aa6.5□□□□□ -1.37
GCN1-209ENST00000551920 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
GCN1-209ENST00000551920 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
GCN1-209ENST00000551920 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
GCN1-209ENST00000551920 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
GCN1-209ENST00000551920 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
GCN1-209ENST00000551920 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
GCN1-209ENST00000551920 PCP4P48539 62 aa6.35□□□□□ -1.39
GCN1-209ENST00000551920 UQCR11O14957 56 aa6.31□□□□□ -1.4
GCN1-209ENST00000551920 SPRR2EP22531 72 aa6.28□□□□□ -1.4
GCN1-209ENST00000551920 SPRR2BP35325 72 aa6.28□□□□□ -1.4
GCN1-209ENST00000551920 SPRR2AP35326 72 aa6.28□□□□□ -1.4
GCN1-209ENST00000551920 Q1T7F1 81 aa6.28□□□□□ -1.4
GCN1-209ENST00000551920 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
GCN1-209ENST00000551920 PSPHP1O15172 72 aa6.26□□□□□ -1.41
GCN1-209ENST00000551920 V9GYY9 64 aa6.25□□□□□ -1.41
GCN1-209ENST00000551920 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
GCN1-209ENST00000551920 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
GCN1-209ENST00000551920 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
GCN1-209ENST00000551920 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
GCN1-209ENST00000551920 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
GCN1-209ENST00000551920 MT1EP04732 61 aa6.09□□□□□ -1.43
GCN1-209ENST00000551920 TNP1P09430 55 aa6.08□□□□□ -1.44
GCN1-209ENST00000551920 SPRR2DP22532 72 aa6.06□□□□□ -1.44
GCN1-209ENST00000551920 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
GCN1-209ENST00000551920 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
GCN1-209ENST00000551920 A6NED7 52 aa6.03□□□□□ -1.44
GCN1-209ENST00000551920 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
GCN1-209ENST00000551920 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
GCN1-209ENST00000551920 K7ERS5 55 aa5.97□□□□□ -1.45
GCN1-209ENST00000551920 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
GCN1-209ENST00000551920 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
GCN1-209ENST00000551920 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms