RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
PRPF40B-212ENST00000551111 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
PRPF40B-212ENST00000551111 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
PRPF40B-212ENST00000551111 A0A087WVE0 104 aa5.06□□□□□ -1.6
PRPF40B-212ENST00000551111 SMIM6P0DI80 62 aa5.06□□□□□ -1.6
PRPF40B-212ENST00000551111 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
PRPF40B-212ENST00000551111 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
PRPF40B-212ENST00000551111 SPCS1Q9Y6A9 102 aa5.01□□□□□ -1.61
PRPF40B-212ENST00000551111 PRO0461Q9UI25 63 aa5□□□□□ -1.61
PRPF40B-212ENST00000551111 UBL5Q9BZL1 73 aa4.98□□□□□ -1.61
PRPF40B-212ENST00000551111 IMUPQ9GZP8 106 aa4.96□□□□□ -1.62
PRPF40B-212ENST00000551111 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
PRPF40B-212ENST00000551111 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
PRPF40B-212ENST00000551111 LOC105371267A0A1B0GV96 52 aa4.92□□□□□ -1.62
PRPF40B-212ENST00000551111 K7EP34 96 aa4.92□□□□□ -1.62
PRPF40B-212ENST00000551111 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
PRPF40B-212ENST00000551111 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
PRPF40B-212ENST00000551111 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.63
PRPF40B-212ENST00000551111 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
PRPF40B-212ENST00000551111 MT1XP80297 61 aa4.88□□□□□ -1.63
PRPF40B-212ENST00000551111 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
PRPF40B-212ENST00000551111 SPRR2EP22531 72 aa4.86□□□□□ -1.63
PRPF40B-212ENST00000551111 SPRR2BP35325 72 aa4.86□□□□□ -1.63
PRPF40B-212ENST00000551111 SPRR2AP35326 72 aa4.86□□□□□ -1.63
PRPF40B-212ENST00000551111 TRAV22A0A0B4J277 110 aa4.85□□□□□ -1.63
PRPF40B-212ENST00000551111 H0YAA0 97 aa4.83□□□□□ -1.64
PRPF40B-212ENST00000551111 ETDBQ3ZM63 59 aa4.83□□□□□ -1.64
PRPF40B-212ENST00000551111 COL5A1-AS1Q5SY13 56 aa4.83□□□□□ -1.64
PRPF40B-212ENST00000551111 ADM2Q7Z4H4 148 aa4.83□□□□□ -1.64
PRPF40B-212ENST00000551111 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
PRPF40B-212ENST00000551111 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
PRPF40B-212ENST00000551111 NDUFC1O43677 76 aa4.81□□□□□ -1.64
PRPF40B-212ENST00000551111 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
PRPF40B-212ENST00000551111 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
PRPF40B-212ENST00000551111 A8MUN3 132 aa4.79□□□□□ -1.64
PRPF40B-212ENST00000551111 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
PRPF40B-212ENST00000551111 H0Y9P7 68 aa4.77□□□□□ -1.65
PRPF40B-212ENST00000551111 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
PRPF40B-212ENST00000551111 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
PRPF40B-212ENST00000551111 F8W1H4 67 aa4.75□□□□□ -1.65
PRPF40B-212ENST00000551111 P0C880 135 aa4.75□□□□□ -1.65
PRPF40B-212ENST00000551111 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
PRPF40B-212ENST00000551111 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
PRPF40B-212ENST00000551111 UQCRQO14949 82 aa4.73□□□□□ -1.65
PRPF40B-212ENST00000551111 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
PRPF40B-212ENST00000551111 GTF2H5Q6ZYL4 71 aa4.73□□□□□ -1.65
PRPF40B-212ENST00000551111 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
PRPF40B-212ENST00000551111 ACYP1P07311 99 aa4.72□□□□□ -1.65
PRPF40B-212ENST00000551111 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
PRPF40B-212ENST00000551111 ATOX1O00244 68 aa4.69□□□□□ -1.66
PRPF40B-212ENST00000551111 SPRR2DP22532 72 aa4.69□□□□□ -1.66
PRPF40B-212ENST00000551111 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
PRPF40B-212ENST00000551111 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
PRPF40B-212ENST00000551111 R4GN34 69 aa4.67□□□□□ -1.66
PRPF40B-212ENST00000551111 M0QZ58 72 aa4.66□□□□□ -1.66
PRPF40B-212ENST00000551111 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
PRPF40B-212ENST00000551111 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
PRPF40B-212ENST00000551111 FAM240AA0A1B0GVK7 77 aa4.62□□□□□ -1.67
PRPF40B-212ENST00000551111 PCP4L1A6NKN8 68 aa4.62□□□□□ -1.67
PRPF40B-212ENST00000551111 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
PRPF40B-212ENST00000551111 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
PRPF40B-212ENST00000551111 MP68P56378 58 aa4.55□□□□□ -1.68
PRPF40B-212ENST00000551111 LINC00643Q86TS7 51 aa4.55□□□□□ -1.68
PRPF40B-212ENST00000551111 C20orf197Q8N268 126 aa4.55□□□□□ -1.68
PRPF40B-212ENST00000551111 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
PRPF40B-212ENST00000551111 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
PRPF40B-212ENST00000551111 H3BPC8 53 aa4.45□□□□□ -1.7
PRPF40B-212ENST00000551111 MT-ATP8P03928 68 aa4.43□□□□□ -1.7
PRPF40B-212ENST00000551111 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
PRPF40B-212ENST00000551111 TRAV7A0A075B6U4 112 aa4.4□□□□□ -1.71
PRPF40B-212ENST00000551111 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
PRPF40B-212ENST00000551111 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
PRPF40B-212ENST00000551111 ACYP2P14621 99 aa4.37□□□□□ -1.71
PRPF40B-212ENST00000551111 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
PRPF40B-212ENST00000551111 A0A1B0GV90 55 aa4.36□□□□□ -1.71
PRPF40B-212ENST00000551111 SCGB1A1P11684 91 aa4.36□□□□□ -1.71
PRPF40B-212ENST00000551111 PCP4P48539 62 aa4.33□□□□□ -1.72
PRPF40B-212ENST00000551111 MT1EP04732 61 aa4.32□□□□□ -1.72
PRPF40B-212ENST00000551111 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
PRPF40B-212ENST00000551111 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
PRPF40B-212ENST00000551111 SPTSSBQ8NFR3 76 aa4.29□□□□□ -1.72
PRPF40B-212ENST00000551111 CHKB-CPT1BH3BT56 60 aa4.26□□□□□ -1.73
PRPF40B-212ENST00000551111 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
PRPF40B-212ENST00000551111 SNURFQ9Y675 71 aa4.23□□□□□ -1.73
PRPF40B-212ENST00000551111 J3QR89 54 aa4.21□□□□□ -1.74
PRPF40B-212ENST00000551111 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
PRPF40B-212ENST00000551111 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
PRPF40B-212ENST00000551111 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
PRPF40B-212ENST00000551111 A0A0D9SG42 100 aa4.17□□□□□ -1.74
PRPF40B-212ENST00000551111 MT4P47944 62 aa4.17□□□□□ -1.74
PRPF40B-212ENST00000551111 MT1GP13640 62 aa4.16□□□□□ -1.74
PRPF40B-212ENST00000551111 SMIM20Q8N5G0 67 aa4.15□□□□□ -1.75
PRPF40B-212ENST00000551111 MT1MQ8N339 61 aa4.14□□□□□ -1.75
PRPF40B-212ENST00000551111 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
PRPF40B-212ENST00000551111 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
PRPF40B-212ENST00000551111 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
PRPF40B-212ENST00000551111 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
PRPF40B-212ENST00000551111 MT1LQ93083 61 aa4.1□□□□□ -1.75
PRPF40B-212ENST00000551111 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
PRPF40B-212ENST00000551111 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms