RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
RAB5B-206ENST00000549505 A0A1B0GU69 56 aa5.26□□□□□ -1.57
RAB5B-206ENST00000549505 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
RAB5B-206ENST00000549505 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
RAB5B-206ENST00000549505 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
RAB5B-206ENST00000549505 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
RAB5B-206ENST00000549505 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
RAB5B-206ENST00000549505 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
RAB5B-206ENST00000549505 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
RAB5B-206ENST00000549505 ROMO1P60602 79 aa5.18□□□□□ -1.58
RAB5B-206ENST00000549505 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
RAB5B-206ENST00000549505 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
RAB5B-206ENST00000549505 UQCR11O14957 56 aa5.15□□□□□ -1.59
RAB5B-206ENST00000549505 HERC2O95714 4834 aa5.12□□□□□ -1.59
RAB5B-206ENST00000549505 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
RAB5B-206ENST00000549505 P0C880 135 aa5.1□□□□□ -1.59
RAB5B-206ENST00000549505 BIRC6Q9NR09 4857 aa5.09□□□□□ -1.59
RAB5B-206ENST00000549505 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
RAB5B-206ENST00000549505 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
RAB5B-206ENST00000549505 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
RAB5B-206ENST00000549505 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
RAB5B-206ENST00000549505 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
RAB5B-206ENST00000549505 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
RAB5B-206ENST00000549505 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
RAB5B-206ENST00000549505 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
RAB5B-206ENST00000549505 S4R3F8 94 aa4.98□□□□□ -1.61
RAB5B-206ENST00000549505 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
RAB5B-206ENST00000549505 H0YAA0 97 aa4.95□□□□□ -1.62
RAB5B-206ENST00000549505 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
RAB5B-206ENST00000549505 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
RAB5B-206ENST00000549505 J3QL48 77 aa4.94□□□□□ -1.62
RAB5B-206ENST00000549505 A0A1B0GU33 70 aa4.92□□□□□ -1.62
RAB5B-206ENST00000549505 LRP2P98164 4655 aa4.92□□□□□ -1.62
RAB5B-206ENST00000549505 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
RAB5B-206ENST00000549505 LPAP08519 4548 aa4.88□□□□□ -1.63
RAB5B-206ENST00000549505 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
RAB5B-206ENST00000549505 A0A0D9SG42 100 aa4.81□□□□□ -1.64
RAB5B-206ENST00000549505 K7ERS5 55 aa4.78□□□□□ -1.64
RAB5B-206ENST00000549505 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
RAB5B-206ENST00000549505 M0QZ58 72 aa4.77□□□□□ -1.65
RAB5B-206ENST00000549505 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
RAB5B-206ENST00000549505 PCLOQ9Y6V0 5065 aa4.75□□□□□ -1.65
RAB5B-206ENST00000549505 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
RAB5B-206ENST00000549505 HERC1Q15751 4861 aa4.72□□□□□ -1.65
RAB5B-206ENST00000549505 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
RAB5B-206ENST00000549505 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
RAB5B-206ENST00000549505 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
RAB5B-206ENST00000549505 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
RAB5B-206ENST00000549505 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
RAB5B-206ENST00000549505 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
RAB5B-206ENST00000549505 R4GN34 69 aa4.53□□□□□ -1.68
RAB5B-206ENST00000549505 MT1HP80294 61 aa4.52□□□□□ -1.69
RAB5B-206ENST00000549505 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
RAB5B-206ENST00000549505 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
RAB5B-206ENST00000549505 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
RAB5B-206ENST00000549505 MUC2Q02817 5179 aa4.41□□□□□ -1.7
RAB5B-206ENST00000549505 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.71
RAB5B-206ENST00000549505 MT2AP02795 61 aa4.39□□□□□ -1.71
RAB5B-206ENST00000549505 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
RAB5B-206ENST00000549505 MT1FP04733 61 aa4.35□□□□□ -1.71
RAB5B-206ENST00000549505 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
RAB5B-206ENST00000549505 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.72
RAB5B-206ENST00000549505 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
RAB5B-206ENST00000549505 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
RAB5B-206ENST00000549505 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
RAB5B-206ENST00000549505 M0R2T5 61 aa4.26□□□□□ -1.73
RAB5B-206ENST00000549505 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-206ENST00000549505 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
RAB5B-206ENST00000549505 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
RAB5B-206ENST00000549505 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
RAB5B-206ENST00000549505 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
RAB5B-206ENST00000549505 MT1BP07438 61 aa4.21□□□□□ -1.73
RAB5B-206ENST00000549505 TNP1P09430 55 aa4.15□□□□□ -1.74
RAB5B-206ENST00000549505 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
RAB5B-206ENST00000549505 MT1XP80297 61 aa4.11□□□□□ -1.75
RAB5B-206ENST00000549505 LCE2BO14633 110 aa4.05□□□□□ -1.76
RAB5B-206ENST00000549505 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
RAB5B-206ENST00000549505 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
RAB5B-206ENST00000549505 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
RAB5B-206ENST00000549505 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
RAB5B-206ENST00000549505 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
RAB5B-206ENST00000549505 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
RAB5B-206ENST00000549505 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
RAB5B-206ENST00000549505 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
RAB5B-206ENST00000549505 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
RAB5B-206ENST00000549505 USH2AO75445 5202 aa3.79□□□□□ -1.8
RAB5B-206ENST00000549505 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
RAB5B-206ENST00000549505 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
RAB5B-206ENST00000549505 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
RAB5B-206ENST00000549505 INE1O15225 51 aa3.64□□□□□ -1.83
RAB5B-206ENST00000549505 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
RAB5B-206ENST00000549505 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
RAB5B-206ENST00000549505 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
RAB5B-206ENST00000549505 MT1EP04732 61 aa3.59□□□□□ -1.83
RAB5B-206ENST00000549505 MT1LQ93083 61 aa3.55□□□□□ -1.84
RAB5B-206ENST00000549505 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
RAB5B-206ENST00000549505 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
RAB5B-206ENST00000549505 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
RAB5B-206ENST00000549505 MT1GP13640 62 aa3.41□□□□□ -1.86
RAB5B-206ENST00000549505 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms