RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
GATC-202ENST00000548171 H0YAA0 97 aa8.44□□□□□ -1.06
GATC-202ENST00000548171 BATFQ16520 125 aa8.44□□□□□ -1.06
GATC-202ENST00000548171 LCE1AQ5T7P2 110 aa8.44□□□□□ -1.06
GATC-202ENST00000548171 A0A087WVE0 104 aa8.43□□□□□ -1.06
GATC-202ENST00000548171 CYP4F30PQ9H0H9 118 aa8.42□□□□□ -1.06
GATC-202ENST00000548171 MT1XP80297 61 aa8.41□□□□□ -1.06
GATC-202ENST00000548171 A8MUN3 132 aa8.37□□□□□ -1.07
GATC-202ENST00000548171 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
GATC-202ENST00000548171 NDUFC1O43677 76 aa8.36□□□□□ -1.07
GATC-202ENST00000548171 SPRR2DP22532 72 aa8.35□□□□□ -1.07
GATC-202ENST00000548171 KRTAP12-2P59991 146 aa8.34□□□□□ -1.07
GATC-202ENST00000548171 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
GATC-202ENST00000548171 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
GATC-202ENST00000548171 SMIM6P0DI80 62 aa8.3□□□□□ -1.08
GATC-202ENST00000548171 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
GATC-202ENST00000548171 SPCS1Q9Y6A9 102 aa8.28□□□□□ -1.08
GATC-202ENST00000548171 TRAV22A0A0B4J277 110 aa8.27□□□□□ -1.09
GATC-202ENST00000548171 K7EP34 96 aa8.21□□□□□ -1.1
GATC-202ENST00000548171 KRTAP4-8A0A0G2JLE6 195 aa8.18□□□□□ -1.1
GATC-202ENST00000548171 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
GATC-202ENST00000548171 ACYP1P07311 99 aa8.17□□□□□ -1.1
GATC-202ENST00000548171 PRO0461Q9UI25 63 aa8.17□□□□□ -1.1
GATC-202ENST00000548171 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
GATC-202ENST00000548171 R4GN34 69 aa8.15□□□□□ -1.1
GATC-202ENST00000548171 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
GATC-202ENST00000548171 ATOX1O00244 68 aa8.1□□□□□ -1.11
GATC-202ENST00000548171 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
GATC-202ENST00000548171 UQCRQO14949 82 aa8.06□□□□□ -1.12
GATC-202ENST00000548171 H0Y9P7 68 aa8.05□□□□□ -1.12
GATC-202ENST00000548171 M0QZ58 72 aa8.04□□□□□ -1.12
GATC-202ENST00000548171 P0C880 135 aa8□□□□□ -1.13
GATC-202ENST00000548171 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
GATC-202ENST00000548171 KRTAP10-12P60413 245 aa8□□□□□ -1.13
GATC-202ENST00000548171 GPR98Q8WXG9 6306 aa7.97□□□□□ -1.13
GATC-202ENST00000548171 COL5A1-AS1Q5SY13 56 aa7.95□□□□□ -1.14
GATC-202ENST00000548171 LINC01554Q52M75 96 aa7.94□□□□□ -1.14
GATC-202ENST00000548171 ETDBQ3ZM63 59 aa7.91□□□□□ -1.14
GATC-202ENST00000548171 F8W1H4 67 aa7.9□□□□□ -1.14
GATC-202ENST00000548171 HIST1H4AP62805 103 aaKnown RBP7.89□□□□□ -1.15
GATC-202ENST00000548171 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
GATC-202ENST00000548171 GTF2H5Q6ZYL4 71 aa7.88□□□□□ -1.15
GATC-202ENST00000548171 LINC00208Q96KT6 92 aa7.88□□□□□ -1.15
GATC-202ENST00000548171 MP68P56378 58 aa7.79□□□□□ -1.16
GATC-202ENST00000548171 DSTQ03001 7570 aaKnown RBP7.78□□□□□ -1.16
GATC-202ENST00000548171 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
GATC-202ENST00000548171 LOC105371267A0A1B0GV96 52 aa7.73□□□□□ -1.17
GATC-202ENST00000548171 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
GATC-202ENST00000548171 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
GATC-202ENST00000548171 OCR1Q9BZK8 76 aa7.69□□□□□ -1.18
GATC-202ENST00000548171 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
GATC-202ENST00000548171 LCE5AQ5TCM9 118 aa7.63□□□□□ -1.19
GATC-202ENST00000548171 H3BPC8 53 aa7.61□□□□□ -1.19
GATC-202ENST00000548171 LINC00643Q86TS7 51 aa7.59□□□□□ -1.19
GATC-202ENST00000548171 TRAV7A0A075B6U4 112 aa7.57□□□□□ -1.2
GATC-202ENST00000548171 KRTAP19-3Q7Z4W3 81 aa7.54□□□□□ -1.2
GATC-202ENST00000548171 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.21
GATC-202ENST00000548171 MT1EP04732 61 aa7.49□□□□□ -1.21
GATC-202ENST00000548171 SPTSSBQ8NFR3 76 aa7.49□□□□□ -1.21
GATC-202ENST00000548171 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
GATC-202ENST00000548171 ACYP2P14621 99 aa7.45□□□□□ -1.22
GATC-202ENST00000548171 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
GATC-202ENST00000548171 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
GATC-202ENST00000548171 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
GATC-202ENST00000548171 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
GATC-202ENST00000548171 MT1GP13640 62 aa7.33□□□□□ -1.24
GATC-202ENST00000548171 MT4P47944 62 aa7.32□□□□□ -1.24
GATC-202ENST00000548171 CHKB-CPT1BH3BT56 60 aa7.3□□□□□ -1.24
GATC-202ENST00000548171 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
GATC-202ENST00000548171 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
GATC-202ENST00000548171 HMCN1Q96RW7 5635 aa7.26□□□□□ -1.25
GATC-202ENST00000548171 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
GATC-202ENST00000548171 KRTAP5-10Q6L8G5 202 aa7.2□□□□□ -1.26
GATC-202ENST00000548171 A0A0D9SG42 100 aa7.19□□□□□ -1.26
GATC-202ENST00000548171 KRTAP19-5Q3LI72 72 aa7.19□□□□□ -1.26
GATC-202ENST00000548171 MT1MQ8N339 61 aa7.17□□□□□ -1.26
GATC-202ENST00000548171 KRTAP5-4Q6L8H1 288 aa7.14□□□□□ -1.27
GATC-202ENST00000548171 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
GATC-202ENST00000548171 MT1LQ93083 61 aa7.07□□□□□ -1.28
GATC-202ENST00000548171 KRTAP4-6Q9BYQ5 205 aa7.06□□□□□ -1.28
GATC-202ENST00000548171 J3QR89 54 aa7.04□□□□□ -1.28
GATC-202ENST00000548171 SMIM20Q8N5G0 67 aa7.04□□□□□ -1.28
GATC-202ENST00000548171 KRTAP5-7Q6L8G8 165 aa7□□□□□ -1.29
GATC-202ENST00000548171 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
GATC-202ENST00000548171 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
GATC-202ENST00000548171 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
GATC-202ENST00000548171 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
GATC-202ENST00000548171 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
GATC-202ENST00000548171 SEC61GP60059 68 aa6.89□□□□□ -1.31
GATC-202ENST00000548171 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
GATC-202ENST00000548171 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
GATC-202ENST00000548171 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
GATC-202ENST00000548171 A0A1B0GV90 55 aa6.84□□□□□ -1.31
GATC-202ENST00000548171 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
GATC-202ENST00000548171 A0A1B0GU33 70 aa6.8□□□□□ -1.32
GATC-202ENST00000548171 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
GATC-202ENST00000548171 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
GATC-202ENST00000548171 COA5Q86WW8 74 aa6.76□□□□□ -1.33
GATC-202ENST00000548171 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
GATC-202ENST00000548171 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms