RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
SSH1-204ENST00000546697 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
SSH1-204ENST00000546697 A0A087WVE0 104 aa6.95□□□□□ -1.3
SSH1-204ENST00000546697 H0Y9P7 68 aa6.94□□□□□ -1.3
SSH1-204ENST00000546697 PCP4P48539 62 aa6.94□□□□□ -1.3
SSH1-204ENST00000546697 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
SSH1-204ENST00000546697 OCR1Q9BZK8 76 aa6.93□□□□□ -1.3
SSH1-204ENST00000546697 A8MUN3 132 aa6.9□□□□□ -1.3
SSH1-204ENST00000546697 KLKP1Q107X0 134 aa6.9□□□□□ -1.3
SSH1-204ENST00000546697 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
SSH1-204ENST00000546697 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
SSH1-204ENST00000546697 MT1BP07438 61 aa6.89□□□□□ -1.31
SSH1-204ENST00000546697 H0YAA0 97 aa6.88□□□□□ -1.31
SSH1-204ENST00000546697 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
SSH1-204ENST00000546697 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
SSH1-204ENST00000546697 LINC00208Q96KT6 92 aa6.83□□□□□ -1.32
SSH1-204ENST00000546697 H3BPC8 53 aa6.82□□□□□ -1.32
SSH1-204ENST00000546697 Q5VV11 94 aa6.82□□□□□ -1.32
SSH1-204ENST00000546697 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
SSH1-204ENST00000546697 MP68P56378 58 aa6.81□□□□□ -1.32
SSH1-204ENST00000546697 NDUFC1O43677 76 aa6.8□□□□□ -1.32
SSH1-204ENST00000546697 SERP2Q8N6R1 65 aa6.75□□□□□ -1.33
SSH1-204ENST00000546697 KRTAP6-3Q3LI67 103 aa6.74□□□□□ -1.33
SSH1-204ENST00000546697 COX7CP15954 63 aa6.73□□□□□ -1.33
SSH1-204ENST00000546697 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
SSH1-204ENST00000546697 TRAV7A0A075B6U4 112 aa6.71□□□□□ -1.34
SSH1-204ENST00000546697 A6NN06 94 aa6.71□□□□□ -1.34
SSH1-204ENST00000546697 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
SSH1-204ENST00000546697 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
SSH1-204ENST00000546697 NEBP20929 6669 aa6.61□□□□□ -1.35
SSH1-204ENST00000546697 CCDC179H3BU77 68 aa6.6□□□□□ -1.35
SSH1-204ENST00000546697 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
SSH1-204ENST00000546697 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
SSH1-204ENST00000546697 TMEM258P61165 79 aa6.54□□□□□ -1.36
SSH1-204ENST00000546697 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
SSH1-204ENST00000546697 P0C880 135 aa6.53□□□□□ -1.36
SSH1-204ENST00000546697 KRTAP5-9P26371 169 aa6.5□□□□□ -1.37
SSH1-204ENST00000546697 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
SSH1-204ENST00000546697 ACYP2P14621 99 aa6.49□□□□□ -1.37
SSH1-204ENST00000546697 R4GN34 69 aa6.48□□□□□ -1.37
SSH1-204ENST00000546697 MT1XP80297 61 aa6.47□□□□□ -1.37
SSH1-204ENST00000546697 H7BZZ5 65 aa6.46□□□□□ -1.38
SSH1-204ENST00000546697 KMT2DO14686 5537 aa6.45□□□□□ -1.38
SSH1-204ENST00000546697 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
SSH1-204ENST00000546697 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
SSH1-204ENST00000546697 SPANXA2-OT1Q8N9U9 137 aa6.41□□□□□ -1.38
SSH1-204ENST00000546697 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
SSH1-204ENST00000546697 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
SSH1-204ENST00000546697 M0QZ58 72 aa6.4□□□□□ -1.38
SSH1-204ENST00000546697 CYSTM1Q9H1C7 97 aa6.4□□□□□ -1.38
SSH1-204ENST00000546697 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
SSH1-204ENST00000546697 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
SSH1-204ENST00000546697 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
SSH1-204ENST00000546697 KRTAP20-1Q3LI63 56 aa6.35□□□□□ -1.39
SSH1-204ENST00000546697 SERP1Q9Y6X1 66 aa6.31□□□□□ -1.4
SSH1-204ENST00000546697 CHKB-CPT1BH3BT56 60 aa6.28□□□□□ -1.4
SSH1-204ENST00000546697 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
SSH1-204ENST00000546697 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
SSH1-204ENST00000546697 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
SSH1-204ENST00000546697 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
SSH1-204ENST00000546697 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
SSH1-204ENST00000546697 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
SSH1-204ENST00000546697 COA5Q86WW8 74 aa6.13□□□□□ -1.43
SSH1-204ENST00000546697 KRTAP2-3P0C7H8 128 aa6.12□□□□□ -1.43
SSH1-204ENST00000546697 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
SSH1-204ENST00000546697 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
SSH1-204ENST00000546697 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
SSH1-204ENST00000546697 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
SSH1-204ENST00000546697 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
SSH1-204ENST00000546697 V9GYY9 64 aa6.07□□□□□ -1.44
SSH1-204ENST00000546697 SPRR2EP22531 72 aa6.05□□□□□ -1.44
SSH1-204ENST00000546697 SPRR2BP35325 72 aa6.05□□□□□ -1.44
SSH1-204ENST00000546697 SPRR2AP35326 72 aa6.05□□□□□ -1.44
SSH1-204ENST00000546697 Q1T7F1 81 aa6.03□□□□□ -1.44
SSH1-204ENST00000546697 SEC61GP60059 68 aa5.97□□□□□ -1.45
SSH1-204ENST00000546697 A0A1B0GU33 70 aa5.91□□□□□ -1.46
SSH1-204ENST00000546697 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
SSH1-204ENST00000546697 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
SSH1-204ENST00000546697 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
SSH1-204ENST00000546697 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
SSH1-204ENST00000546697 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
SSH1-204ENST00000546697 SPRR2DP22532 72 aa5.86□□□□□ -1.47
SSH1-204ENST00000546697 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
SSH1-204ENST00000546697 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
SSH1-204ENST00000546697 A0A0D9SG42 100 aa5.82□□□□□ -1.48
SSH1-204ENST00000546697 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
SSH1-204ENST00000546697 A0A1B0GU69 56 aa5.79□□□□□ -1.48
SSH1-204ENST00000546697 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
SSH1-204ENST00000546697 PSPHP1O15172 72 aa5.74□□□□□ -1.49
SSH1-204ENST00000546697 MT1EP04732 61 aa5.73□□□□□ -1.49
SSH1-204ENST00000546697 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
SSH1-204ENST00000546697 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
SSH1-204ENST00000546697 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
SSH1-204ENST00000546697 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
SSH1-204ENST00000546697 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
SSH1-204ENST00000546697 A8MU10 97 aa5.65□□□□□ -1.5
SSH1-204ENST00000546697 A6NED7 52 aa5.64□□□□□ -1.51
SSH1-204ENST00000546697 UQCR11O14957 56 aa5.64□□□□□ -1.51
SSH1-204ENST00000546697 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
SSH1-204ENST00000546697 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms