RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 V9GYY9 64 aa9.63□□□□□ -0.87
SKP2-208ENST00000546211 UBR4Q5T4S7 5183 aa9.62□□□□□ -0.87
SKP2-208ENST00000546211 Q1T7F1 81 aa9.62□□□□□ -0.87
SKP2-208ENST00000546211 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
SKP2-208ENST00000546211 MUC2Q02817 5179 aa9.59□□□□□ -0.87
SKP2-208ENST00000546211 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
SKP2-208ENST00000546211 LINC01558Q9Y6Z2 57 aa9.56□□□□□ -0.88
SKP2-208ENST00000546211 RNF213Q63HN8 5207 aa9.55□□□□□ -0.88
SKP2-208ENST00000546211 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
SKP2-208ENST00000546211 PRR15LQ9BU68 103 aa9.47□□□□□ -0.89
SKP2-208ENST00000546211 A0A1B0GU69 56 aa9.46□□□□□ -0.9
SKP2-208ENST00000546211 PSPHP1O15172 72 aa9.46□□□□□ -0.9
SKP2-208ENST00000546211 SEC61GP60059 68 aa9.44□□□□□ -0.9
SKP2-208ENST00000546211 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
SKP2-208ENST00000546211 Q5VV11 94 aa9.35□□□□□ -0.91
SKP2-208ENST00000546211 FLGP20930 4061 aaPredicted RBP9.31□□□□□ -0.92
SKP2-208ENST00000546211 H0YAA0 97 aa9.25□□□□□ -0.93
SKP2-208ENST00000546211 MT1HP80294 61 aa9.25□□□□□ -0.93
SKP2-208ENST00000546211 ADM2Q7Z4H4 148 aa9.24□□□□□ -0.93
SKP2-208ENST00000546211 M0R2T5 61 aa9.22□□□□□ -0.93
SKP2-208ENST00000546211 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
SKP2-208ENST00000546211 FAT4Q6V0I7 4981 aa9.22□□□□□ -0.93
SKP2-208ENST00000546211 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
SKP2-208ENST00000546211 A6NED7 52 aa9.19□□□□□ -0.94
SKP2-208ENST00000546211 A0A1B0GU33 70 aa9.16□□□□□ -0.94
SKP2-208ENST00000546211 P0C880 135 aa9.16□□□□□ -0.94
SKP2-208ENST00000546211 UQCR11O14957 56 aa9.16□□□□□ -0.94
SKP2-208ENST00000546211 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
SKP2-208ENST00000546211 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
SKP2-208ENST00000546211 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
SKP2-208ENST00000546211 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
SKP2-208ENST00000546211 M0QZ58 72 aa8.96□□□□□ -0.97
SKP2-208ENST00000546211 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
SKP2-208ENST00000546211 R4GN34 69 aa8.95□□□□□ -0.98
SKP2-208ENST00000546211 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
SKP2-208ENST00000546211 A8MU10 97 aa8.9□□□□□ -0.98
SKP2-208ENST00000546211 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
SKP2-208ENST00000546211 CRIPTQ9P021 101 aa8.9□□□□□ -0.99
SKP2-208ENST00000546211 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
SKP2-208ENST00000546211 MT2AP02795 61 aa8.87□□□□□ -0.99
SKP2-208ENST00000546211 KRTAP10-10P60014 251 aa8.83□□□□□ -1
SKP2-208ENST00000546211 A0A0D9SG42 100 aa8.82□□□□□ -1
SKP2-208ENST00000546211 MT1FP04733 61 aa8.82□□□□□ -1
SKP2-208ENST00000546211 PRO0628Q9UI54 55 aa8.81□□□□□ -1
SKP2-208ENST00000546211 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
SKP2-208ENST00000546211 K7ERS5 55 aa8.69□□□□□ -1.02
SKP2-208ENST00000546211 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
SKP2-208ENST00000546211 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
SKP2-208ENST00000546211 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
SKP2-208ENST00000546211 KRTAP12-1P59990 96 aa8.62□□□□□ -1.03
SKP2-208ENST00000546211 A6NN06 94 aa8.6□□□□□ -1.03
SKP2-208ENST00000546211 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
SKP2-208ENST00000546211 KRTAP9-3Q9BYQ3 159 aa8.57□□□□□ -1.04
SKP2-208ENST00000546211 PMAIP1Q13794 54 aa8.55□□□□□ -1.04
SKP2-208ENST00000546211 KRTAP19-8Q3LI54 63 aa8.45□□□□□ -1.06
SKP2-208ENST00000546211 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
SKP2-208ENST00000546211 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
SKP2-208ENST00000546211 LCE2BO14633 110 aa8.34□□□□□ -1.07
SKP2-208ENST00000546211 MT1BP07438 61 aa8.33□□□□□ -1.08
SKP2-208ENST00000546211 ROMO1P60602 79 aa8.27□□□□□ -1.09
SKP2-208ENST00000546211 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
SKP2-208ENST00000546211 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
SKP2-208ENST00000546211 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
SKP2-208ENST00000546211 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
SKP2-208ENST00000546211 USH2AO75445 5202 aa8.1□□□□□ -1.11
SKP2-208ENST00000546211 MT1XP80297 61 aa8.05□□□□□ -1.12
SKP2-208ENST00000546211 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
SKP2-208ENST00000546211 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
SKP2-208ENST00000546211 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
SKP2-208ENST00000546211 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
SKP2-208ENST00000546211 TNP1P09430 55 aa7.96□□□□□ -1.14
SKP2-208ENST00000546211 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
SKP2-208ENST00000546211 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
SKP2-208ENST00000546211 SSPOA2VEC9 5147 aa7.83□□□□□ -1.16
SKP2-208ENST00000546211 KRTAP9-2Q9BYQ4 174 aa7.82□□□□□ -1.16
SKP2-208ENST00000546211 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
SKP2-208ENST00000546211 FSIP2Q5CZC0 6907 aa7.72□□□□□ -1.17
SKP2-208ENST00000546211 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
SKP2-208ENST00000546211 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
SKP2-208ENST00000546211 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
SKP2-208ENST00000546211 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
SKP2-208ENST00000546211 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
SKP2-208ENST00000546211 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
SKP2-208ENST00000546211 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
SKP2-208ENST00000546211 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
SKP2-208ENST00000546211 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
SKP2-208ENST00000546211 KMT2DO14686 5537 aa7.35□□□□□ -1.23
SKP2-208ENST00000546211 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
SKP2-208ENST00000546211 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
SKP2-208ENST00000546211 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
SKP2-208ENST00000546211 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
SKP2-208ENST00000546211 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.26
SKP2-208ENST00000546211 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.27
SKP2-208ENST00000546211 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.27
SKP2-208ENST00000546211 MT1EP04732 61 aa7.07□□□□□ -1.28
SKP2-208ENST00000546211 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
SKP2-208ENST00000546211 MT1LQ93083 61 aa6.92□□□□□ -1.3
SKP2-208ENST00000546211 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
SKP2-208ENST00000546211 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
SKP2-208ENST00000546211 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms