RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 SPANXA2-OT1Q8N9U9 137 aa8.3□□□□□ -1.08
CADM1-220ENST00000546000 A8MUN3 132 aa8.29□□□□□ -1.08
CADM1-220ENST00000546000 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
CADM1-220ENST00000546000 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
CADM1-220ENST00000546000 S4R3F8 94 aa8.29□□□□□ -1.08
CADM1-220ENST00000546000 LCA10Q71F78 164 aa8.27□□□□□ -1.09
CADM1-220ENST00000546000 M0R2T5 61 aa8.26□□□□□ -1.09
CADM1-220ENST00000546000 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
CADM1-220ENST00000546000 ACYP2P14621 99 aa8.19□□□□□ -1.1
CADM1-220ENST00000546000 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
CADM1-220ENST00000546000 TMEM258P61165 79 aa8.14□□□□□ -1.11
CADM1-220ENST00000546000 COA5Q86WW8 74 aa8.13□□□□□ -1.11
CADM1-220ENST00000546000 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
CADM1-220ENST00000546000 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
CADM1-220ENST00000546000 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
CADM1-220ENST00000546000 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
CADM1-220ENST00000546000 KRTAP9-8Q9BYQ0 159 aa8.04□□□□□ -1.12
CADM1-220ENST00000546000 MT2AP02795 61 aa8.02□□□□□ -1.13
CADM1-220ENST00000546000 MT1FP04733 61 aa7.98□□□□□ -1.13
CADM1-220ENST00000546000 SPTSSBQ8NFR3 76 aa7.94□□□□□ -1.14
CADM1-220ENST00000546000 KRTAP10-10P60014 251 aa7.89□□□□□ -1.15
CADM1-220ENST00000546000 ADM2Q7Z4H4 148 aa7.89□□□□□ -1.15
CADM1-220ENST00000546000 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
CADM1-220ENST00000546000 H0YAA0 97 aa7.85□□□□□ -1.15
CADM1-220ENST00000546000 P0C880 135 aa7.84□□□□□ -1.15
CADM1-220ENST00000546000 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
CADM1-220ENST00000546000 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
CADM1-220ENST00000546000 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CADM1-220ENST00000546000 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
CADM1-220ENST00000546000 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
CADM1-220ENST00000546000 A0A1B0GU69 56 aa7.65□□□□□ -1.18
CADM1-220ENST00000546000 SEC61GP60059 68 aa7.65□□□□□ -1.18
CADM1-220ENST00000546000 LCE2BO14633 110 aa7.64□□□□□ -1.19
CADM1-220ENST00000546000 RPS28P62857 69 aaKnown RBP7.64□□□□□ -1.19
CADM1-220ENST00000546000 SMIM26A0A096LP01 95 aa7.61□□□□□ -1.19
CADM1-220ENST00000546000 M0QZ58 72 aa7.61□□□□□ -1.19
CADM1-220ENST00000546000 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
CADM1-220ENST00000546000 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
CADM1-220ENST00000546000 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
CADM1-220ENST00000546000 R4GN34 69 aa7.59□□□□□ -1.19
CADM1-220ENST00000546000 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
CADM1-220ENST00000546000 USH2AO75445 5202 aa7.55□□□□□ -1.2
CADM1-220ENST00000546000 Q1T7F1 81 aa7.54□□□□□ -1.2
CADM1-220ENST00000546000 SSPOA2VEC9 5147 aa7.53□□□□□ -1.2
CADM1-220ENST00000546000 A0A1B0GU33 70 aa7.52□□□□□ -1.21
CADM1-220ENST00000546000 PSPHP1O15172 72 aa7.52□□□□□ -1.21
CADM1-220ENST00000546000 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
CADM1-220ENST00000546000 SPATA8Q6RVD6 105 aa7.5□□□□□ -1.21
CADM1-220ENST00000546000 V9GYY9 64 aa7.49□□□□□ -1.21
CADM1-220ENST00000546000 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
CADM1-220ENST00000546000 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
CADM1-220ENST00000546000 MT1BP07438 61 aa7.46□□□□□ -1.22
CADM1-220ENST00000546000 Q5VV11 94 aa7.44□□□□□ -1.22
CADM1-220ENST00000546000 A0A0D9SG42 100 aa7.4□□□□□ -1.22
CADM1-220ENST00000546000 A8MU10 97 aa7.37□□□□□ -1.23
CADM1-220ENST00000546000 MACF1Q9UPN3 7388 aaKnown RBP7.37□□□□□ -1.23
CADM1-220ENST00000546000 SYNE2Q8WXH0 6885 aaKnown RBP7.36□□□□□ -1.23
CADM1-220ENST00000546000 UQCR11O14957 56 aa7.32□□□□□ -1.24
CADM1-220ENST00000546000 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
CADM1-220ENST00000546000 A6NED7 52 aa7.25□□□□□ -1.25
CADM1-220ENST00000546000 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
CADM1-220ENST00000546000 A6NN06 94 aa7.24□□□□□ -1.25
CADM1-220ENST00000546000 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
CADM1-220ENST00000546000 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
CADM1-220ENST00000546000 SPINT4Q6UDR6 99 aa7.21□□□□□ -1.26
CADM1-220ENST00000546000 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
CADM1-220ENST00000546000 MT1XP80297 61 aa7.14□□□□□ -1.27
CADM1-220ENST00000546000 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
CADM1-220ENST00000546000 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
CADM1-220ENST00000546000 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
CADM1-220ENST00000546000 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
CADM1-220ENST00000546000 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
CADM1-220ENST00000546000 NEBP20929 6669 aa6.95□□□□□ -1.3
CADM1-220ENST00000546000 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
CADM1-220ENST00000546000 K7ERS5 55 aa6.91□□□□□ -1.3
CADM1-220ENST00000546000 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
CADM1-220ENST00000546000 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
CADM1-220ENST00000546000 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
CADM1-220ENST00000546000 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
CADM1-220ENST00000546000 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
CADM1-220ENST00000546000 KMT2DO14686 5537 aa6.69□□□□□ -1.34
CADM1-220ENST00000546000 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
CADM1-220ENST00000546000 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
CADM1-220ENST00000546000 TNP1P09430 55 aa6.65□□□□□ -1.34
CADM1-220ENST00000546000 ROMO1P60602 79 aa6.64□□□□□ -1.35
CADM1-220ENST00000546000 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
CADM1-220ENST00000546000 MDN1Q9NU22 5596 aa6.6□□□□□ -1.35
CADM1-220ENST00000546000 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
CADM1-220ENST00000546000 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
CADM1-220ENST00000546000 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
CADM1-220ENST00000546000 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
CADM1-220ENST00000546000 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
CADM1-220ENST00000546000 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
CADM1-220ENST00000546000 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
CADM1-220ENST00000546000 SPRR2FQ96RM1 72 aa6.39□□□□□ -1.39
CADM1-220ENST00000546000 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
CADM1-220ENST00000546000 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
CADM1-220ENST00000546000 MT1EP04732 61 aa6.28□□□□□ -1.4
CADM1-220ENST00000546000 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CADM1-220ENST00000546000 SPRR2EP22531 72 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms