RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 NISCHQ9Y2I1 1504 aa40.14■■■■■ 4.02
CADM1-220ENST00000546000 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.25
CADM1-220ENST00000546000 ABCC9O60706 1549 aa34.01■■■■□ 3.04
CADM1-220ENST00000546000 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
CADM1-220ENST00000546000 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
CADM1-220ENST00000546000 DCAF1Q9Y4B6 1507 aa33.14■■■□□ 2.9
CADM1-220ENST00000546000 NACADO15069 1562 aa33■■■□□ 2.87
CADM1-220ENST00000546000 MYO15BQ96JP2 1530 aa32.97■■■□□ 2.87
CADM1-220ENST00000546000 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
CADM1-220ENST00000546000 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
CADM1-220ENST00000546000 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
CADM1-220ENST00000546000 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
CADM1-220ENST00000546000 BICRAQ9NZM4 1560 aa31.99■■■□□ 2.71
CADM1-220ENST00000546000 PABPN1Q86U42 306 aaKnown RBP eCLIP31.9■■■□□ 2.7
CADM1-220ENST00000546000 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
CADM1-220ENST00000546000 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
CADM1-220ENST00000546000 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
CADM1-220ENST00000546000 SMARCA4P51532 1647 aa31.04■■■□□ 2.56
CADM1-220ENST00000546000 MROH2BQ7Z745 1585 aa31.04■■■□□ 2.56
CADM1-220ENST00000546000 BAZ1AQ9NRL2 1556 aaPredicted RBP31.03■■■□□ 2.56
CADM1-220ENST00000546000 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.53
CADM1-220ENST00000546000 WIZO95785 1651 aa30.76■■■□□ 2.51
CADM1-220ENST00000546000 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.51
CADM1-220ENST00000546000 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
CADM1-220ENST00000546000 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
CADM1-220ENST00000546000 PEG3Q9GZU2 1588 aa30.63■■■□□ 2.49
CADM1-220ENST00000546000 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
CADM1-220ENST00000546000 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
CADM1-220ENST00000546000 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
CADM1-220ENST00000546000 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
CADM1-220ENST00000546000 HMGXB3Q12766 1538 aa30.4■■■□□ 2.46
CADM1-220ENST00000546000 CCDC88BA6NC98 1476 aa30.05■■■□□ 2.4
CADM1-220ENST00000546000 NESP48681 1621 aa29.68■■■□□ 2.34
CADM1-220ENST00000546000 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
CADM1-220ENST00000546000 CFTRP13569 1480 aa29.61■■■□□ 2.33
CADM1-220ENST00000546000 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
CADM1-220ENST00000546000 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
CADM1-220ENST00000546000 FANCD2Q9BXW9 1451 aa29.35■■■□□ 2.29
CADM1-220ENST00000546000 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
CADM1-220ENST00000546000 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
CADM1-220ENST00000546000 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
CADM1-220ENST00000546000 CEP164Q9UPV0 1460 aa29.23■■■□□ 2.27
CADM1-220ENST00000546000 ERCC6Q03468 1493 aa29.18■■■□□ 2.26
CADM1-220ENST00000546000 DNAJC5Q9H3Z4 198 aa29.18■■■□□ 2.26
CADM1-220ENST00000546000 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
CADM1-220ENST00000546000 CUX1P39880 1505 aa29.08■■■□□ 2.25
CADM1-220ENST00000546000 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
CADM1-220ENST00000546000 URB2Q14146 1524 aaKnown RBP29.06■■■□□ 2.24
CADM1-220ENST00000546000 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
CADM1-220ENST00000546000 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
CADM1-220ENST00000546000 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
CADM1-220ENST00000546000 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
CADM1-220ENST00000546000 TOPBP1Q92547 1522 aa28.97■■■□□ 2.23
CADM1-220ENST00000546000 TOP2BQ02880 1626 aa28.95■■■□□ 2.23
CADM1-220ENST00000546000 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
CADM1-220ENST00000546000 CUX2O14529 1486 aa28.93■■■□□ 2.22
CADM1-220ENST00000546000 WDR62O43379 1518 aa28.92■■■□□ 2.22
CADM1-220ENST00000546000 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
CADM1-220ENST00000546000 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
CADM1-220ENST00000546000 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
CADM1-220ENST00000546000 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
CADM1-220ENST00000546000 SOGA1O94964 1423 aa28.61■■■□□ 2.17
CADM1-220ENST00000546000 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
CADM1-220ENST00000546000 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
CADM1-220ENST00000546000 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
CADM1-220ENST00000546000 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
CADM1-220ENST00000546000 RUSC2Q8N2Y8 1516 aa28.52■■■□□ 2.16
CADM1-220ENST00000546000 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
CADM1-220ENST00000546000 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
CADM1-220ENST00000546000 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
CADM1-220ENST00000546000 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
CADM1-220ENST00000546000 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
CADM1-220ENST00000546000 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
CADM1-220ENST00000546000 AQRO60306 1485 aaKnown RBP eCLIP28.37■■■□□ 2.137e-6■■□□□ 13.1
CADM1-220ENST00000546000 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
CADM1-220ENST00000546000 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
CADM1-220ENST00000546000 EEA1Q15075 1411 aa28.26■■■□□ 2.11
CADM1-220ENST00000546000 GRIN2BQ13224 1484 aa28.2■■■□□ 2.1
CADM1-220ENST00000546000 IGF1RP08069 1367 aa28.19■■■□□ 2.1
CADM1-220ENST00000546000 ERICH3Q5RHP9 1530 aa28.17■■■□□ 2.1
CADM1-220ENST00000546000 SNAPC4Q5SXM2 1469 aa28.15■■■□□ 2.1
CADM1-220ENST00000546000 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
CADM1-220ENST00000546000 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
CADM1-220ENST00000546000 CUL7Q14999 1698 aa28.08■■■□□ 2.09
CADM1-220ENST00000546000 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
CADM1-220ENST00000546000 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
CADM1-220ENST00000546000 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
CADM1-220ENST00000546000 KIF21BO75037 1637 aa28.03■■■□□ 2.08
CADM1-220ENST00000546000 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
CADM1-220ENST00000546000 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
CADM1-220ENST00000546000 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
CADM1-220ENST00000546000 SYNJ2O15056 1496 aa27.93■■■□□ 2.06
CADM1-220ENST00000546000 GOLGA3Q08378 1498 aa27.92■■■□□ 2.06
CADM1-220ENST00000546000 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
CADM1-220ENST00000546000 CHD1O14646 1710 aa27.89■■■□□ 2.06
CADM1-220ENST00000546000 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
CADM1-220ENST00000546000 FBLN2P98095 1184 aa27.85■■■□□ 2.05
CADM1-220ENST00000546000 CHMP7Q8WUX9 453 aaPredicted RBP27.82■■■□□ 2.04
CADM1-220ENST00000546000 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
CADM1-220ENST00000546000 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms