RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
CNN3-207ENST00000545882 LINC01554Q52M75 96 aa7.96□□□□□ -1.13
CNN3-207ENST00000545882 RYR3Q15413 4870 aa7.96□□□□□ -1.14
CNN3-207ENST00000545882 Q5VSD8 79 aa7.95□□□□□ -1.14
CNN3-207ENST00000545882 RYR1P21817 5038 aa7.91□□□□□ -1.14
CNN3-207ENST00000545882 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
CNN3-207ENST00000545882 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
CNN3-207ENST00000545882 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.16
CNN3-207ENST00000545882 XP32Q5T750 250 aa7.82□□□□□ -1.16
CNN3-207ENST00000545882 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
CNN3-207ENST00000545882 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
CNN3-207ENST00000545882 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
CNN3-207ENST00000545882 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
CNN3-207ENST00000545882 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
CNN3-207ENST00000545882 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
CNN3-207ENST00000545882 S4R3F8 94 aa7.72□□□□□ -1.17
CNN3-207ENST00000545882 K7ERS5 55 aa7.7□□□□□ -1.18
CNN3-207ENST00000545882 EPPK1P58107 5090 aaKnown RBP7.67□□□□□ -1.18
CNN3-207ENST00000545882 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
CNN3-207ENST00000545882 P0C880 135 aa7.65□□□□□ -1.18
CNN3-207ENST00000545882 A0A0D9SG42 100 aa7.63□□□□□ -1.19
CNN3-207ENST00000545882 ROMO1P60602 79 aa7.62□□□□□ -1.19
CNN3-207ENST00000545882 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
CNN3-207ENST00000545882 LPAP08519 4548 aa7.52□□□□□ -1.21
CNN3-207ENST00000545882 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
CNN3-207ENST00000545882 LRP2P98164 4655 aa7.48□□□□□ -1.21
CNN3-207ENST00000545882 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
CNN3-207ENST00000545882 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
CNN3-207ENST00000545882 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
CNN3-207ENST00000545882 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.21
CNN3-207ENST00000545882 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
CNN3-207ENST00000545882 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
CNN3-207ENST00000545882 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
CNN3-207ENST00000545882 M0QZ58 72 aa7.35□□□□□ -1.23
CNN3-207ENST00000545882 H3BS24 57 aa7.29□□□□□ -1.24
CNN3-207ENST00000545882 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
CNN3-207ENST00000545882 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.25
CNN3-207ENST00000545882 HERC2O95714 4834 aa7.21□□□□□ -1.25
CNN3-207ENST00000545882 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
CNN3-207ENST00000545882 J3QL48 77 aa7.17□□□□□ -1.26
CNN3-207ENST00000545882 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
CNN3-207ENST00000545882 LCE2BO14633 110 aa7.15□□□□□ -1.27
CNN3-207ENST00000545882 R4GN34 69 aa7.14□□□□□ -1.27
CNN3-207ENST00000545882 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
CNN3-207ENST00000545882 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
CNN3-207ENST00000545882 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
CNN3-207ENST00000545882 MUC2Q02817 5179 aa6.92□□□□□ -1.3
CNN3-207ENST00000545882 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
CNN3-207ENST00000545882 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
CNN3-207ENST00000545882 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
CNN3-207ENST00000545882 HERC1Q15751 4861 aa6.84□□□□□ -1.31
CNN3-207ENST00000545882 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
CNN3-207ENST00000545882 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
CNN3-207ENST00000545882 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
CNN3-207ENST00000545882 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
CNN3-207ENST00000545882 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
CNN3-207ENST00000545882 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
CNN3-207ENST00000545882 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
CNN3-207ENST00000545882 TNP1P09430 55 aa6.54□□□□□ -1.36
CNN3-207ENST00000545882 UBR4Q5T4S7 5183 aa6.54□□□□□ -1.36
CNN3-207ENST00000545882 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
CNN3-207ENST00000545882 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
CNN3-207ENST00000545882 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
CNN3-207ENST00000545882 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
CNN3-207ENST00000545882 MT1HP80294 61 aa6.49□□□□□ -1.37
CNN3-207ENST00000545882 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.39
CNN3-207ENST00000545882 M0R2T5 61 aa6.39□□□□□ -1.39
CNN3-207ENST00000545882 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
CNN3-207ENST00000545882 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
CNN3-207ENST00000545882 MT2AP02795 61 aa6.35□□□□□ -1.39
CNN3-207ENST00000545882 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
CNN3-207ENST00000545882 MT1FP04733 61 aa6.34□□□□□ -1.39
CNN3-207ENST00000545882 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
CNN3-207ENST00000545882 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
CNN3-207ENST00000545882 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
CNN3-207ENST00000545882 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
CNN3-207ENST00000545882 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
CNN3-207ENST00000545882 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
CNN3-207ENST00000545882 MT1BP07438 61 aa6.16□□□□□ -1.42
CNN3-207ENST00000545882 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
CNN3-207ENST00000545882 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
CNN3-207ENST00000545882 MT1XP80297 61 aa6.11□□□□□ -1.43
CNN3-207ENST00000545882 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
CNN3-207ENST00000545882 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
CNN3-207ENST00000545882 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
CNN3-207ENST00000545882 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
CNN3-207ENST00000545882 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
CNN3-207ENST00000545882 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
CNN3-207ENST00000545882 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
CNN3-207ENST00000545882 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
CNN3-207ENST00000545882 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
CNN3-207ENST00000545882 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
CNN3-207ENST00000545882 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
CNN3-207ENST00000545882 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
CNN3-207ENST00000545882 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
CNN3-207ENST00000545882 USH2AO75445 5202 aa5.72□□□□□ -1.49
CNN3-207ENST00000545882 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
CNN3-207ENST00000545882 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
CNN3-207ENST00000545882 LCE1DQ5T752 114 aa5.65□□□□□ -1.51
CNN3-207ENST00000545882 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms