RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 NCBP2-AS2Q69YL0 99 aa-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 NOP10Q9NPE3 64 aaKnown RBP-0.96□□□□□ -2.56
LEMD3-206ENST00000545026 H3BUA1 57 aa-0.97□□□□□ -2.56
LEMD3-206ENST00000545026 FCER1GP30273 86 aa-0.97□□□□□ -2.56
LEMD3-206ENST00000545026 C6orf48Q9UBA6 75 aa-0.97□□□□□ -2.56
LEMD3-206ENST00000545026 DMXL2Q8TDJ6 3036 aa-0.97□□□□□ -2.57
LEMD3-206ENST00000545026 C3P01024 1663 aa-0.97□□□□□ -2.57
LEMD3-206ENST00000545026 MROH1Q8NDA8 1641 aa-0.98□□□□□ -2.57
LEMD3-206ENST00000545026 DIP2AQ14689 1571 aa-0.99□□□□□ -2.57
LEMD3-206ENST00000545026 RRBP1Q9P2E9 1410 aaKnown RBP-0.99□□□□□ -2.57
LEMD3-206ENST00000545026 ATMQ13315 3056 aa-1□□□□□ -2.57
LEMD3-206ENST00000545026 CSMD2Q7Z408 3487 aa-1□□□□□ -2.57
LEMD3-206ENST00000545026 ETDCA0A1B0GVM5 59 aa-1□□□□□ -2.57
LEMD3-206ENST00000545026 LINC01546A6NGU7 62 aa-1□□□□□ -2.57
LEMD3-206ENST00000545026 ENHOQ6UWT2 76 aa-1□□□□□ -2.57
LEMD3-206ENST00000545026 M0QY20 66 aa-1.01□□□□□ -2.57
LEMD3-206ENST00000545026 MT1MQ8N339 61 aa-1.01□□□□□ -2.57
LEMD3-206ENST00000545026 ASXL1Q8IXJ9 1541 aa-1.01□□□□□ -2.57
LEMD3-206ENST00000545026 ABCC6O95255 1503 aa-1.02□□□□□ -2.57
LEMD3-206ENST00000545026 MT2AP02795 61 aa-1.02□□□□□ -2.57
LEMD3-206ENST00000545026 DEFB114Q30KQ6 69 aa-1.02□□□□□ -2.57
LEMD3-206ENST00000545026 M0QZ58 72 aa-1.03□□□□□ -2.57
LEMD3-206ENST00000545026 C18orf32Q8TCD1 76 aa-1.03□□□□□ -2.57
LEMD3-206ENST00000545026 FAM208AQ9UK61 1670 aaKnown RBP-1.04□□□□□ -2.58
LEMD3-206ENST00000545026 MADDQ8WXG6 1647 aa-1.04□□□□□ -2.58
LEMD3-206ENST00000545026 CLASP1Q7Z460 1538 aa-1.04□□□□□ -2.58
LEMD3-206ENST00000545026 DNMBPQ6XZF7 1577 aa-1.04□□□□□ -2.58
LEMD3-206ENST00000545026 H3BVH4 76 aa-1.05□□□□□ -2.58
LEMD3-206ENST00000545026 CROCC2H7BZ55 1655 aa-1.06□□□□□ -2.58
LEMD3-206ENST00000545026 PREX2Q70Z35 1606 aa-1.06□□□□□ -2.58
LEMD3-206ENST00000545026 DEFB4AO15263 64 aa-1.06□□□□□ -2.58
LEMD3-206ENST00000545026 MT1BP07438 61 aa-1.06□□□□□ -2.58
LEMD3-206ENST00000545026 SPART-AS1P0CW21 52 aa-1.06□□□□□ -2.58
LEMD3-206ENST00000545026 A8MTW9 85 aa-1.07□□□□□ -2.58
LEMD3-206ENST00000545026 CRYBG3Q68DQ2 2970 aa-1.07□□□□□ -2.58
LEMD3-206ENST00000545026 TIAM1Q13009 1591 aa-1.08□□□□□ -2.58
LEMD3-206ENST00000545026 ZFHX4Q86UP3 3567 aa-1.08□□□□□ -2.58
LEMD3-206ENST00000545026 KAAG1Q9UBP8 84 aa-1.09□□□□□ -2.58
LEMD3-206ENST00000545026 BOD1L1Q8NFC6 3051 aa-1.09□□□□□ -2.58
LEMD3-206ENST00000545026 PRUNE2Q8WUY3 3088 aa-1.09□□□□□ -2.58
LEMD3-206ENST00000545026 FREM2Q5SZK8 3169 aa-1.1□□□□□ -2.58
LEMD3-206ENST00000545026 IQGAP3Q86VI3 1631 aa-1.1□□□□□ -2.59
LEMD3-206ENST00000545026 ABRACLQ9P1F3 81 aa-1.1□□□□□ -2.59
LEMD3-206ENST00000545026 GLI2P10070 1586 aa-1.1□□□□□ -2.59
LEMD3-206ENST00000545026 ALS2Q96Q42 1657 aa-1.1□□□□□ -2.59
LEMD3-206ENST00000545026 KIF21BO75037 1637 aa-1.11□□□□□ -2.59
LEMD3-206ENST00000545026 ABCA9Q8IUA7 1624 aa-1.11□□□□□ -2.59
LEMD3-206ENST00000545026 ATXN8Q156A1 80 aa-1.12□□□□□ -2.59
LEMD3-206ENST00000545026 VPS13CQ709C8 3753 aa-1.12□□□□□ -2.59
LEMD3-206ENST00000545026 CFAP54Q96N23 3096 aa-1.13□□□□□ -2.59
LEMD3-206ENST00000545026 HILPDAQ9Y5L2 63 aa-1.13□□□□□ -2.59
LEMD3-206ENST00000545026 LEAP2Q969E1 77 aa-1.14□□□□□ -2.59
LEMD3-206ENST00000545026 MYO15AQ9UKN7 3530 aa-1.14□□□□□ -2.59
LEMD3-206ENST00000545026 UGGT2Q9NYU1 1516 aa-1.15□□□□□ -2.59
LEMD3-206ENST00000545026 SCRIBQ14160 1630 aa-1.15□□□□□ -2.59
LEMD3-206ENST00000545026 KRTAP20-1Q3LI63 56 aa-1.15□□□□□ -2.59
LEMD3-206ENST00000545026 GNG13Q9P2W3 67 aa-1.15□□□□□ -2.59
LEMD3-206ENST00000545026 SMIM27A0A1W2PRY6 76 aa-1.16□□□□□ -2.6
LEMD3-206ENST00000545026 WFDC10BQ8IUB3 73 aa-1.16□□□□□ -2.6
LEMD3-206ENST00000545026 K7EMI3 77 aa-1.17□□□□□ -2.6
LEMD3-206ENST00000545026 LINC00308Q8TCZ7 52 aa-1.17□□□□□ -2.6
LEMD3-206ENST00000545026 EFCAB6Q5THR3 1501 aa-1.18□□□□□ -2.6
LEMD3-206ENST00000545026 DUOX2Q9NRD8 1548 aa-1.18□□□□□ -2.6
LEMD3-206ENST00000545026 M0R1W7 72 aa-1.18□□□□□ -2.6
LEMD3-206ENST00000545026 DEFB136Q30KP8 78 aa-1.18□□□□□ -2.6
LEMD3-206ENST00000545026 TMEM167BQ9NRX6 74 aa-1.18□□□□□ -2.6
LEMD3-206ENST00000545026 LINC01549A6NIU2 74 aa-1.19□□□□□ -2.6
LEMD3-206ENST00000545026 EEA1Q15075 1411 aa-1.19□□□□□ -2.6
LEMD3-206ENST00000545026 ABCA6Q8N139 1617 aa-1.19□□□□□ -2.6
LEMD3-206ENST00000545026 POLR2KP53803 58 aaKnown RBP-1.2□□□□□ -2.6
LEMD3-206ENST00000545026 RPS29P62273 56 aaKnown RBP-1.2□□□□□ -2.6
LEMD3-206ENST00000545026 WDFY3Q8IZQ1 3526 aa-1.2□□□□□ -2.6
LEMD3-206ENST00000545026 MROH2AA6NES4 1674 aa-1.2□□□□□ -2.6
LEMD3-206ENST00000545026 LMO7Q8WWI1 1683 aa-1.21□□□□□ -2.6
LEMD3-206ENST00000545026 FRYLO94915 3013 aa-1.21□□□□□ -2.6
LEMD3-206ENST00000545026 SERF2P84101 59 aa-1.23□□□□□ -2.61
LEMD3-206ENST00000545026 NMES1Q9C002 83 aa-1.23□□□□□ -2.61
LEMD3-206ENST00000545026 CEP250Q9BV73 2442 aa-1.23□□□□□ -2.61
LEMD3-206ENST00000545026 DMDP11532 3685 aa-1.23□□□□□ -2.61
LEMD3-206ENST00000545026 SPEGQ15772 3267 aa-1.24□□□□□ -2.61
LEMD3-206ENST00000545026 PCNTO95613 3336 aa-1.24□□□□□ -2.61
LEMD3-206ENST00000545026 CCDC180Q9P1Z9 1646 aa-1.26□□□□□ -2.61
LEMD3-206ENST00000545026 IGIPA6NJ69 53 aa-1.26□□□□□ -2.61
LEMD3-206ENST00000545026 MT1FP04733 61 aa-1.26□□□□□ -2.61
LEMD3-206ENST00000545026 DEFB131AP59861 70 aa-1.26□□□□□ -2.61
LEMD3-206ENST00000545026 UGGT1Q9NYU2 1555 aa-1.26□□□□□ -2.61
LEMD3-206ENST00000545026 SYCP2Q9BX26 1530 aa-1.27□□□□□ -2.61
LEMD3-206ENST00000545026 SMCO4Q9NRQ5 59 aa-1.28□□□□□ -2.61
LEMD3-206ENST00000545026 CEP350Q5VT06 3117 aa-1.28□□□□□ -2.61
LEMD3-206ENST00000545026 S100ZQ8WXG8 99 aa-1.29□□□□□ -2.62
LEMD3-206ENST00000545026 EFCAB5A4FU69 1503 aa-1.3□□□□□ -2.62
LEMD3-206ENST00000545026 H0YGX0 51 aa-1.3□□□□□ -2.62
LEMD3-206ENST00000545026 PDCD5O14737 125 aa-1.3□□□□□ -2.62
LEMD3-206ENST00000545026 SZT2Q5T011 3432 aa-1.3□□□□□ -2.62
LEMD3-206ENST00000545026 DDX60Q8IY21 1712 aaKnown RBP-1.32□□□□□ -2.62
LEMD3-206ENST00000545026 TFF3Q07654 80 aa-1.32□□□□□ -2.62
LEMD3-206ENST00000545026 KRTAP19-6Q3LI70 58 aa-1.32□□□□□ -2.62
LEMD3-206ENST00000545026 AGLP35573 1532 aa-1.32□□□□□ -2.62
LEMD3-206ENST00000545026 CENPEQ02224 2701 aa-1.32□□□□□ -2.62
LEMD3-206ENST00000545026 CPS1P31327 1500 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 898.5 ms