RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 C4orf26Q17RF5 130 aa4.85□□□□□ -1.63
YBX3-215ENST00000544504 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
YBX3-215ENST00000544504 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
YBX3-215ENST00000544504 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.63
YBX3-215ENST00000544504 FAM236CP0DP71 79 aa4.84□□□□□ -1.63
YBX3-215ENST00000544504 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
YBX3-215ENST00000544504 ATP5EP56381 51 aaPredicted RBP4.83□□□□□ -1.64
YBX3-215ENST00000544504 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
YBX3-215ENST00000544504 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
YBX3-215ENST00000544504 TMEM258P61165 79 aa4.81□□□□□ -1.64
YBX3-215ENST00000544504 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
YBX3-215ENST00000544504 DMAC1Q96GE9 116 aa4.8□□□□□ -1.64
YBX3-215ENST00000544504 CYSTM1Q9H1C7 97 aa4.8□□□□□ -1.64
YBX3-215ENST00000544504 ACYP2P14621 99 aa4.79□□□□□ -1.64
YBX3-215ENST00000544504 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
YBX3-215ENST00000544504 M0R2T5 61 aa4.78□□□□□ -1.64
YBX3-215ENST00000544504 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
YBX3-215ENST00000544504 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
YBX3-215ENST00000544504 CHKB-CPT1BH3BT56 60 aa4.71□□□□□ -1.66
YBX3-215ENST00000544504 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
YBX3-215ENST00000544504 S4R3F8 94 aa4.71□□□□□ -1.66
YBX3-215ENST00000544504 COA5Q86WW8 74 aa4.68□□□□□ -1.66
YBX3-215ENST00000544504 SERP1Q9Y6X1 66 aa4.66□□□□□ -1.66
YBX3-215ENST00000544504 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
YBX3-215ENST00000544504 LCA10Q71F78 164 aa4.65□□□□□ -1.67
YBX3-215ENST00000544504 LCE2BO14633 110 aa4.6□□□□□ -1.67
YBX3-215ENST00000544504 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
YBX3-215ENST00000544504 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
YBX3-215ENST00000544504 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
YBX3-215ENST00000544504 NEBP20929 6669 aa4.53□□□□□ -1.68
YBX3-215ENST00000544504 H0YAA0 97 aa4.53□□□□□ -1.68
YBX3-215ENST00000544504 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
YBX3-215ENST00000544504 SEC61GP60059 68 aa4.52□□□□□ -1.69
YBX3-215ENST00000544504 V9GYY9 64 aa4.52□□□□□ -1.69
YBX3-215ENST00000544504 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
YBX3-215ENST00000544504 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
YBX3-215ENST00000544504 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
YBX3-215ENST00000544504 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
YBX3-215ENST00000544504 A0A1B0GU69 56 aa4.46□□□□□ -1.7
YBX3-215ENST00000544504 Q1T7F1 81 aa4.45□□□□□ -1.7
YBX3-215ENST00000544504 ADM2Q7Z4H4 148 aa4.45□□□□□ -1.7
YBX3-215ENST00000544504 MT2AP02795 61 aa4.44□□□□□ -1.7
YBX3-215ENST00000544504 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
YBX3-215ENST00000544504 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
YBX3-215ENST00000544504 CRIPTQ9P021 101 aa4.42□□□□□ -1.7
YBX3-215ENST00000544504 MT1FP04733 61 aa4.4□□□□□ -1.71
YBX3-215ENST00000544504 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
YBX3-215ENST00000544504 P0C880 135 aa4.38□□□□□ -1.71
YBX3-215ENST00000544504 A0A1B0GU33 70 aa4.36□□□□□ -1.71
YBX3-215ENST00000544504 M0QZ58 72 aa4.36□□□□□ -1.71
YBX3-215ENST00000544504 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
YBX3-215ENST00000544504 R4GN34 69 aa4.35□□□□□ -1.71
YBX3-215ENST00000544504 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
YBX3-215ENST00000544504 PSPHP1O15172 72 aa4.33□□□□□ -1.72
YBX3-215ENST00000544504 UQCR11O14957 56 aa4.32□□□□□ -1.72
YBX3-215ENST00000544504 Q5VV11 94 aa4.3□□□□□ -1.72
YBX3-215ENST00000544504 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
YBX3-215ENST00000544504 A6NED7 52 aa4.26□□□□□ -1.73
YBX3-215ENST00000544504 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
YBX3-215ENST00000544504 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
YBX3-215ENST00000544504 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
YBX3-215ENST00000544504 KMT2DO14686 5537 aa4.24□□□□□ -1.73
YBX3-215ENST00000544504 A6NN06 94 aa4.22□□□□□ -1.73
YBX3-215ENST00000544504 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
YBX3-215ENST00000544504 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
YBX3-215ENST00000544504 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
YBX3-215ENST00000544504 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
YBX3-215ENST00000544504 A0A0D9SG42 100 aa4.17□□□□□ -1.74
YBX3-215ENST00000544504 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
YBX3-215ENST00000544504 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
YBX3-215ENST00000544504 K7ERS5 55 aa4.15□□□□□ -1.75
YBX3-215ENST00000544504 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
YBX3-215ENST00000544504 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
YBX3-215ENST00000544504 A8MU10 97 aa4.13□□□□□ -1.75
YBX3-215ENST00000544504 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
YBX3-215ENST00000544504 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
YBX3-215ENST00000544504 MT1BP07438 61 aa4.1□□□□□ -1.75
YBX3-215ENST00000544504 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
YBX3-215ENST00000544504 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
YBX3-215ENST00000544504 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
YBX3-215ENST00000544504 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
YBX3-215ENST00000544504 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
YBX3-215ENST00000544504 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
YBX3-215ENST00000544504 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
YBX3-215ENST00000544504 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
YBX3-215ENST00000544504 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
YBX3-215ENST00000544504 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
YBX3-215ENST00000544504 MT1XP80297 61 aa3.94□□□□□ -1.78
YBX3-215ENST00000544504 SPRR2EP22531 72 aa3.92□□□□□ -1.78
YBX3-215ENST00000544504 SPRR2BP35325 72 aa3.92□□□□□ -1.78
YBX3-215ENST00000544504 SPRR2AP35326 72 aa3.92□□□□□ -1.78
YBX3-215ENST00000544504 ROMO1P60602 79 aa3.88□□□□□ -1.79
YBX3-215ENST00000544504 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
YBX3-215ENST00000544504 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
YBX3-215ENST00000544504 TNP1P09430 55 aa3.86□□□□□ -1.79
YBX3-215ENST00000544504 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
YBX3-215ENST00000544504 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
YBX3-215ENST00000544504 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
YBX3-215ENST00000544504 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
YBX3-215ENST00000544504 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms