RNA–Protein interactions for RNA: ENST00000544304.5

RAB35-206, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 2,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-206ENST00000544304 Q5VSD8 79 aa11.08□□□□□ -0.64
RAB35-206ENST00000544304 HSPG2P98160 4391 aa11.07□□□□□ -0.64
RAB35-206ENST00000544304 DMBT1Q9UGM3 2413 aaPredicted RBP11.07□□□□□ -0.64
RAB35-206ENST00000544304 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
RAB35-206ENST00000544304 K7ERS5 55 aa11.05□□□□□ -0.64
RAB35-206ENST00000544304 XP32Q5T750 250 aa11.04□□□□□ -0.64
RAB35-206ENST00000544304 MYCBP2O75592 4640 aa11.01□□□□□ -0.65
RAB35-206ENST00000544304 KRTAP10-6P60371 365 aaPredicted RBP10.99□□□□□ -0.65
RAB35-206ENST00000544304 KRTAP25-1Q3LHN0 102 aa10.96□□□□□ -0.65
RAB35-206ENST00000544304 S4R3F8 94 aa10.95□□□□□ -0.66
RAB35-206ENST00000544304 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
RAB35-206ENST00000544304 KRTAP13-4Q3LI77 160 aa10.88□□□□□ -0.67
RAB35-206ENST00000544304 A0A0D9SG42 100 aa10.85□□□□□ -0.67
RAB35-206ENST00000544304 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
RAB35-206ENST00000544304 RYR1P21817 5038 aa10.82□□□□□ -0.68
RAB35-206ENST00000544304 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
RAB35-206ENST00000544304 ROMO1P60602 79 aa10.79□□□□□ -0.68
RAB35-206ENST00000544304 P0C880 135 aa10.78□□□□□ -0.68
RAB35-206ENST00000544304 MT1HL1P0DM35 61 aa10.78□□□□□ -0.68
RAB35-206ENST00000544304 RYR3Q15413 4870 aa10.74□□□□□ -0.69
RAB35-206ENST00000544304 LPAP08519 4548 aa10.68□□□□□ -0.7
RAB35-206ENST00000544304 KIAA1109Q2LD37 5005 aa10.67□□□□□ -0.7
RAB35-206ENST00000544304 LRP2P98164 4655 aa10.61□□□□□ -0.71
RAB35-206ENST00000544304 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
RAB35-206ENST00000544304 KRTAP12-2P59991 146 aa10.55□□□□□ -0.72
RAB35-206ENST00000544304 SPINT4Q6UDR6 99 aa10.48□□□□□ -0.73
RAB35-206ENST00000544304 KRTAP12-1P59990 96 aa10.46□□□□□ -0.73
RAB35-206ENST00000544304 M0QZ58 72 aa10.44□□□□□ -0.74
RAB35-206ENST00000544304 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
RAB35-206ENST00000544304 EPPK1P58107 5090 aaKnown RBP10.34□□□□□ -0.75
RAB35-206ENST00000544304 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
RAB35-206ENST00000544304 H3BS24 57 aa10.3□□□□□ -0.76
RAB35-206ENST00000544304 KRTAP4-5Q9BYR2 181 aa10.26□□□□□ -0.77
RAB35-206ENST00000544304 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
RAB35-206ENST00000544304 R4GN34 69 aa10.19□□□□□ -0.78
RAB35-206ENST00000544304 MUC17Q685J3 4493 aa10.11□□□□□ -0.79
RAB35-206ENST00000544304 KRTAP4-1Q9BYQ7 146 aa10.06□□□□□ -0.8
RAB35-206ENST00000544304 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
RAB35-206ENST00000544304 J3QL48 77 aa9.99□□□□□ -0.81
RAB35-206ENST00000544304 KRTAP15-1Q3LI76 137 aa9.99□□□□□ -0.81
RAB35-206ENST00000544304 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
RAB35-206ENST00000544304 HERC2O95714 4834 aa9.84□□□□□ -0.83
RAB35-206ENST00000544304 NDUFAF8A1L188 74 aa9.79□□□□□ -0.84
RAB35-206ENST00000544304 MUC2Q02817 5179 aa9.71□□□□□ -0.85
RAB35-206ENST00000544304 CAMK2N1Q7Z7J9 78 aa9.69□□□□□ -0.86
RAB35-206ENST00000544304 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
RAB35-206ENST00000544304 PLAC4Q8WY50 150 aa9.58□□□□□ -0.88
RAB35-206ENST00000544304 BIRC6Q9NR09 4857 aa9.55□□□□□ -0.88
RAB35-206ENST00000544304 PP632Q6XCG6 107 aa9.53□□□□□ -0.88
RAB35-206ENST00000544304 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
RAB35-206ENST00000544304 HERC1Q15751 4861 aa9.36□□□□□ -0.91
RAB35-206ENST00000544304 TNP1P09430 55 aa9.32□□□□□ -0.92
RAB35-206ENST00000544304 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
RAB35-206ENST00000544304 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
RAB35-206ENST00000544304 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
RAB35-206ENST00000544304 KRTAP23-1A1A580 65 aa9.17□□□□□ -0.94
RAB35-206ENST00000544304 LUZP6Q538Z0 58 aa9.17□□□□□ -0.94
RAB35-206ENST00000544304 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
RAB35-206ENST00000544304 M0R2T5 61 aa9.12□□□□□ -0.95
RAB35-206ENST00000544304 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
RAB35-206ENST00000544304 MT1HP80294 61 aa9.01□□□□□ -0.97
RAB35-206ENST00000544304 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
RAB35-206ENST00000544304 MT1FP04733 61 aa8.9□□□□□ -0.98
RAB35-206ENST00000544304 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
RAB35-206ENST00000544304 MT2AP02795 61 aa8.89□□□□□ -0.99
RAB35-206ENST00000544304 SPRR5A0A1B0GTR4 108 aa8.87□□□□□ -0.99
RAB35-206ENST00000544304 UBR4Q5T4S7 5183 aa8.86□□□□□ -0.99
RAB35-206ENST00000544304 KRTAP9-8Q9BYQ0 159 aa8.82□□□□□ -1
RAB35-206ENST00000544304 LCE3AQ5TA76 89 aa8.81□□□□□ -1
RAB35-206ENST00000544304 KRTAP19-8Q3LI54 63 aa8.72□□□□□ -1.01
RAB35-206ENST00000544304 A0A0A0MQY5 61 aa8.7□□□□□ -1.02
RAB35-206ENST00000544304 MT1BP07438 61 aa8.61□□□□□ -1.03
RAB35-206ENST00000544304 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
RAB35-206ENST00000544304 KRTAP8-1Q8IUC2 63 aa8.58□□□□□ -1.04
RAB35-206ENST00000544304 MT1XP80297 61 aa8.57□□□□□ -1.04
RAB35-206ENST00000544304 KRTAP10-12P60413 245 aa8.44□□□□□ -1.06
RAB35-206ENST00000544304 KRTAP9-3Q9BYQ3 159 aa8.44□□□□□ -1.06
RAB35-206ENST00000544304 KRTAP12-3P60328 96 aa8.4□□□□□ -1.07
RAB35-206ENST00000544304 KRTAP10-7P60409 375 aaPredicted RBP8.35□□□□□ -1.07
RAB35-206ENST00000544304 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
RAB35-206ENST00000544304 LCE2BO14633 110 aa8.1□□□□□ -1.11
RAB35-206ENST00000544304 KRTAP19-5Q3LI72 72 aa8.02□□□□□ -1.13
RAB35-206ENST00000544304 USH2AO75445 5202 aa7.98□□□□□ -1.13
RAB35-206ENST00000544304 LCE3CQ5T5A8 94 aa7.9□□□□□ -1.15
RAB35-206ENST00000544304 KMT2DO14686 5537 aa7.89□□□□□ -1.15
RAB35-206ENST00000544304 INE1O15225 51 aa7.87□□□□□ -1.15
RAB35-206ENST00000544304 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
RAB35-206ENST00000544304 KRTAP4-8A0A0G2JLE6 195 aa7.83□□□□□ -1.16
RAB35-206ENST00000544304 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
RAB35-206ENST00000544304 KRTAP19-7Q3SYF9 63 aa7.64□□□□□ -1.19
RAB35-206ENST00000544304 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
RAB35-206ENST00000544304 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.21
RAB35-206ENST00000544304 KRTAP19-4Q3LI73 84 aa7.42□□□□□ -1.22
RAB35-206ENST00000544304 MT1LQ93083 61 aa7.42□□□□□ -1.22
RAB35-206ENST00000544304 MT1EP04732 61 aa7.41□□□□□ -1.22
RAB35-206ENST00000544304 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
RAB35-206ENST00000544304 KRTAP2-3P0C7H8 128 aa7.36□□□□□ -1.23
RAB35-206ENST00000544304 KRTAP2-4Q9BYR9 128 aa7.36□□□□□ -1.23
RAB35-206ENST00000544304 KRTAP2-1Q9BYU5 128 aa7.36□□□□□ -1.23
RAB35-206ENST00000544304 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms